RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 NASPP49321 788 aaPredicted RBP12.71□□□□□ -0.37
PGK1-201ENST00000373316 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
PGK1-201ENST00000373316 ARGLU1Q9NWB6 273 aaPredicted RBP12.71□□□□□ -0.37
PGK1-201ENST00000373316 CPLX1O14810 134 aa12.71□□□□□ -0.37
PGK1-201ENST00000373316 KRT32Q14532 448 aa12.71□□□□□ -0.37
PGK1-201ENST00000373316 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.37
PGK1-201ENST00000373316 ADAMTSL3P82987 1691 aa12.71□□□□□ -0.37
PGK1-201ENST00000373316 XBP1P17861 261 aa12.71□□□□□ -0.38
PGK1-201ENST00000373316 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.38
PGK1-201ENST00000373316 FAM135BQ49AJ0 1406 aa12.71□□□□□ -0.38
PGK1-201ENST00000373316 SULT6B1Q6IMI4 303 aa12.71□□□□□ -0.38
PGK1-201ENST00000373316 NOB1Q9ULX3 412 aaKnown RBP12.71□□□□□ -0.38
PGK1-201ENST00000373316 PTPRCP08575 1304 aa12.7□□□□□ -0.38
PGK1-201ENST00000373316 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
PGK1-201ENST00000373316 ERICH2A1L162 156 aa12.7□□□□□ -0.38
PGK1-201ENST00000373316 LRRCC1Q9C099 1032 aa12.7□□□□□ -0.38
PGK1-201ENST00000373316 MIS18AQ9NYP9 233 aa12.7□□□□□ -0.38
PGK1-201ENST00000373316 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
PGK1-201ENST00000373316 TEX35Q5T0J7 233 aa12.7□□□□□ -0.38
PGK1-201ENST00000373316 TSPY26PQ9H489 355 aa12.7□□□□□ -0.38
PGK1-201ENST00000373316 TECPR2O15040 1411 aa12.69□□□□□ -0.38
PGK1-201ENST00000373316 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
PGK1-201ENST00000373316 TPD52L1Q16890 204 aaPredicted RBP12.69□□□□□ -0.38
PGK1-201ENST00000373316 PHF8Q9UPP1 1060 aa12.69□□□□□ -0.38
PGK1-201ENST00000373316 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
PGK1-201ENST00000373316 BRMS1Q9HCU9 246 aa12.69□□□□□ -0.38
PGK1-201ENST00000373316 ZNF521Q96K83 1311 aa12.69□□□□□ -0.38
PGK1-201ENST00000373316 IPO7O95373 1038 aaKnown RBP12.68□□□□□ -0.38
PGK1-201ENST00000373316 SHPRHQ149N8 1683 aa12.68□□□□□ -0.38
PGK1-201ENST00000373316 EIF4A2Q14240 407 aaKnown RBP12.68□□□□□ -0.38
PGK1-201ENST00000373316 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
PGK1-201ENST00000373316 MAP3K19Q56UN5 1328 aa12.68□□□□□ -0.38
PGK1-201ENST00000373316 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
PGK1-201ENST00000373316 ZSCAN25Q6NSZ9 544 aa12.68□□□□□ -0.38
PGK1-201ENST00000373316 JMYQ8N9B5 988 aa12.68□□□□□ -0.38
PGK1-201ENST00000373316 BICD2Q8TD16 824 aa12.68□□□□□ -0.38
PGK1-201ENST00000373316 ZNF335Q9H4Z2 1342 aaPredicted RBP12.68□□□□□ -0.38
PGK1-201ENST00000373316 EDC4Q6P2E9 1401 aaKnown RBP12.68□□□□□ -0.38
PGK1-201ENST00000373316 MCTP1Q6DN14 999 aa12.67□□□□□ -0.38
PGK1-201ENST00000373316 RASSF8Q8NHQ8 419 aa12.67□□□□□ -0.38
PGK1-201ENST00000373316 TRIM35Q9UPQ4 493 aa12.67□□□□□ -0.38
PGK1-201ENST00000373316 DIP2AQ14689 1571 aa12.67□□□□□ -0.38
PGK1-201ENST00000373316 MAP2P11137 1827 aaKnown RBP12.67□□□□□ -0.38
PGK1-201ENST00000373316 KRT24Q2M2I5 525 aa12.67□□□□□ -0.38
PGK1-201ENST00000373316 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
PGK1-201ENST00000373316 USP6P35125 1406 aa12.67□□□□□ -0.38
PGK1-201ENST00000373316 IL13P35225 146 aa12.67□□□□□ -0.38
PGK1-201ENST00000373316 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
PGK1-201ENST00000373316 MCM10Q7L590 875 aa12.67□□□□□ -0.38
PGK1-201ENST00000373316 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
PGK1-201ENST00000373316 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
PGK1-201ENST00000373316 RARSP54136 660 aaKnown RBP12.66□□□□□ -0.38
PGK1-201ENST00000373316 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
PGK1-201ENST00000373316 SART3Q15020 963 aaKnown RBP12.66□□□□□ -0.38
PGK1-201ENST00000373316 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
PGK1-201ENST00000373316 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
PGK1-201ENST00000373316 LRRC59Q96AG4 307 aaKnown RBP12.66□□□□□ -0.38
PGK1-201ENST00000373316 DACH1Q9UI36 760 aa12.66□□□□□ -0.38
PGK1-201ENST00000373316 OLFM4Q6UX06 510 aa12.65□□□□□ -0.38
PGK1-201ENST00000373316 ATF3P18847 181 aa12.65□□□□□ -0.38
PGK1-201ENST00000373316 CYP46A1Q9Y6A2 500 aa12.65□□□□□ -0.38
PGK1-201ENST00000373316 TXLNBQ8N3L3 684 aa12.65□□□□□ -0.38
PGK1-201ENST00000373316 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
PGK1-201ENST00000373316 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
PGK1-201ENST00000373316 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
PGK1-201ENST00000373316 SLC4A3P48751 1232 aa12.64□□□□□ -0.39
PGK1-201ENST00000373316 ERCC4Q92889 916 aaPredicted RBP12.64□□□□□ -0.39
PGK1-201ENST00000373316 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
PGK1-201ENST00000373316 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
PGK1-201ENST00000373316 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.64□□□□□ -0.392e-9■■□□□ 12.8
PGK1-201ENST00000373316 TBC1D2BQ9UPU7 963 aa12.64□□□□□ -0.39
PGK1-201ENST00000373316 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
PGK1-201ENST00000373316 TMEM94Q12767 1356 aa12.64□□□□□ -0.39
PGK1-201ENST00000373316 EVA1CP58658 441 aa12.64□□□□□ -0.39
PGK1-201ENST00000373316 MCM4P33991 863 aa12.63□□□□□ -0.39
PGK1-201ENST00000373316 CTNNA3Q9UI47 895 aa12.63□□□□□ -0.39
PGK1-201ENST00000373316 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
PGK1-201ENST00000373316 TATP17735 454 aaPredicted RBP12.63□□□□□ -0.39
PGK1-201ENST00000373316 MCM5P33992 734 aa12.63□□□□□ -0.39
PGK1-201ENST00000373316 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
PGK1-201ENST00000373316 NOL8Q76FK4 1167 aaKnown RBP12.63□□□□□ -0.39
PGK1-201ENST00000373316 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
PGK1-201ENST00000373316 NOC3LQ8WTT2 800 aaKnown RBP12.62□□□□□ -0.39
PGK1-201ENST00000373316 SH2B1Q9NRF2 756 aaPredicted RBP12.62□□□□□ -0.39
PGK1-201ENST00000373316 KIF2AO00139 706 aaPredicted RBP12.62□□□□□ -0.39
PGK1-201ENST00000373316 CDKL5O76039 1030 aa12.62□□□□□ -0.39
PGK1-201ENST00000373316 CDR1P51861 262 aa12.62□□□□□ -0.39
PGK1-201ENST00000373316 SETQ01105 290 aaPredicted RBP12.62□□□□□ -0.39
PGK1-201ENST00000373316 COL3A1P02461 1466 aaPredicted RBP12.62□□□□□ -0.39
PGK1-201ENST00000373316 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
PGK1-201ENST00000373316 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
PGK1-201ENST00000373316 NECTIN2Q92692 538 aa12.62□□□□□ -0.39
PGK1-201ENST00000373316 FSD1Q9BTV5 496 aa12.62□□□□□ -0.39
PGK1-201ENST00000373316 KIF20BQ96Q89 1820 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 SLC3A2P08195 630 aaKnown RBP12.61□□□□□ -0.39
PGK1-201ENST00000373316 GTF2E1P29083 439 aaPredicted RBP12.61□□□□□ -0.39
PGK1-201ENST00000373316 BMP2KLQ5H9B9 411 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
PGK1-201ENST00000373316 CEP89Q96ST8 783 aa12.61□□□□□ -0.39
PGK1-201ENST00000373316 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms