RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 KCNH5Q8NCM2 988 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 RNF214Q8ND24 703 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 TSPY26PQ9H489 355 aa7.87□□□□□ -1.15
CHD6-203ENST00000373233 TTC5Q8N0Z6 440 aa7.86□□□□□ -1.15
CHD6-203ENST00000373233 ZRANB1Q9UGI0 708 aa7.86□□□□□ -1.15
CHD6-203ENST00000373233 NOB1Q9ULX3 412 aaKnown RBP7.86□□□□□ -1.15
CHD6-203ENST00000373233 CTR9Q6PD62 1173 aa7.86□□□□□ -1.15
CHD6-203ENST00000373233 DHX37Q8IY37 1157 aaKnown RBP7.86□□□□□ -1.15
CHD6-203ENST00000373233 GOLGA6L7A0A1B0GV03 622 aa7.86□□□□□ -1.15
CHD6-203ENST00000373233 TICAM2Q86XR7 235 aa7.86□□□□□ -1.15
CHD6-203ENST00000373233 SARNPP82979 210 aaKnown RBP7.86□□□□□ -1.15
CHD6-203ENST00000373233 CAVIN1Q6NZI2 390 aaKnown RBP7.86□□□□□ -1.15
CHD6-203ENST00000373233 CENPHQ9H3R5 247 aa7.86□□□□□ -1.15
CHD6-203ENST00000373233 CDC42BPGQ6DT37 1551 aa7.86□□□□□ -1.15
CHD6-203ENST00000373233 KCNA6P17658 529 aa7.86□□□□□ -1.15
CHD6-203ENST00000373233 EIF2S2P20042 333 aaKnown RBP7.86□□□□□ -1.15
CHD6-203ENST00000373233 PDE3AQ14432 1141 aa7.86□□□□□ -1.15
CHD6-203ENST00000373233 SKIDA1Q1XH10 827 aa7.86□□□□□ -1.15
CHD6-203ENST00000373233 TPM1P09493 284 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 THUMPD2Q9BTF0 503 aaKnown RBP7.85□□□□□ -1.15
CHD6-203ENST00000373233 TRIM6-TRIM34B2RNG4 842 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 FBLN1P23142 703 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 TRIM34Q9BYJ4 488 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 ZNF330Q9Y3S2 320 aaPredicted RBP7.85□□□□□ -1.15
CHD6-203ENST00000373233 IBSPP21815 317 aaPredicted RBP7.85□□□□□ -1.15
CHD6-203ENST00000373233 ZRSR2Q15696 482 aaKnown RBP7.85□□□□□ -1.15
CHD6-203ENST00000373233 MSH6P52701 1360 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 NPHP1O15259 732 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 MNAT1P51948 309 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 CNPY4Q8N129 248 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 CCP110O43303 1012 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 RBM28Q9NW13 759 aaKnown RBP7.85□□□□□ -1.15
CHD6-203ENST00000373233 MCTP1Q6DN14 999 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 TOMM22Q9NS69 142 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 C3P01024 1663 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 ADGRB1O14514 1584 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 TMCO5BA8MYB1 307 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 TWISTNBQ3B726 338 aaPredicted RBP7.85□□□□□ -1.15
CHD6-203ENST00000373233 UBR1Q8IWV7 1749 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 FAM107BQ9H098 131 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 DUSP27Q5VZP5 1158 aa7.85□□□□□ -1.15
CHD6-203ENST00000373233 GORABQ5T7V8 394 aa7.84□□□□□ -1.15
CHD6-203ENST00000373233 CCDC91Q7Z6B0 441 aa7.84□□□□□ -1.15
CHD6-203ENST00000373233 ROBO2Q9HCK4 1378 aa7.84□□□□□ -1.15
CHD6-203ENST00000373233 EIF3JO75822 258 aaKnown RBP7.84□□□□□ -1.15
CHD6-203ENST00000373233 SIRT1Q96EB6 747 aa7.84□□□□□ -1.15
CHD6-203ENST00000373233 PAIP2Q9BPZ3 127 aaKnown RBP7.84□□□□□ -1.15
CHD6-203ENST00000373233 NPHP4O75161 1426 aaPredicted RBP7.84□□□□□ -1.15
CHD6-203ENST00000373233 PTPRMP28827 1452 aa7.84□□□□□ -1.15
CHD6-203ENST00000373233 BANK1Q8NDB2 785 aa7.84□□□□□ -1.15
CHD6-203ENST00000373233 CCDC34Q96HJ3 373 aa7.84□□□□□ -1.15
CHD6-203ENST00000373233 CLSTN1O94985 981 aa7.84□□□□□ -1.15
CHD6-203ENST00000373233 GPATCH3Q96I76 525 aa7.84□□□□□ -1.15
CHD6-203ENST00000373233 RNF20Q5VTR2 975 aa7.84□□□□□ -1.16
CHD6-203ENST00000373233 IL16Q14005 1332 aa7.84□□□□□ -1.16
CHD6-203ENST00000373233 FOXD4L6Q3SYB3 417 aaPredicted RBP7.83□□□□□ -1.16
CHD6-203ENST00000373233 FOXD4L3Q6VB84 417 aaPredicted RBP7.83□□□□□ -1.16
CHD6-203ENST00000373233 TXLNBQ8N3L3 684 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 CEP170BQ9Y4F5 1589 aaPredicted RBP7.83□□□□□ -1.16
CHD6-203ENST00000373233 FOXO3O43524 673 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 NF2P35240 595 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 MCM10Q7L590 875 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 ERLIN1O75477 346 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 USHBP1Q8N6Y0 703 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 CPSF2Q9P2I0 782 aaKnown RBP7.83□□□□□ -1.16
CHD6-203ENST00000373233 MRVI1Q9Y6F6 885 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 ANKRD26Q9UPS8 1709 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 TATP17735 454 aaPredicted RBP7.83□□□□□ -1.16
CHD6-203ENST00000373233 FKBP5Q13451 457 aaPredicted RBP7.83□□□□□ -1.16
CHD6-203ENST00000373233 BACH2Q9BYV9 841 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 CLCN1P35523 988 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 FLT4P35916 1363 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 USP32Q8NFA0 1604 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 DIP2AQ14689 1571 aa7.83□□□□□ -1.16
CHD6-203ENST00000373233 SPDYE4A6NLX3 237 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 GNAT3A8MTJ3 354 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 SETSIPP0DME0 302 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 POLKQ9UBT6 870 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 CAGE1Q8TC20 777 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 PRDM11Q9NQV5 511 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 CCDC30Q5VVM6 783 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 STRN4Q9NRL3 753 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 KIF20AO95235 890 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 RARSP54136 660 aaKnown RBP7.82□□□□□ -1.16
CHD6-203ENST00000373233 NOL10Q9BSC4 688 aaKnown RBP7.82□□□□□ -1.16
CHD6-203ENST00000373233 KRT28Q7Z3Y7 464 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 PSMD1Q99460 953 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 TRIM5Q9C035 493 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 GOLIM4O00461 696 aa7.82□□□□□ -1.16
CHD6-203ENST00000373233 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.82□□□□□ -1.16
CHD6-203ENST00000373233 MBD3O95983 291 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 CCDC27Q2M243 656 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 TSR1Q2NL82 804 aaKnown RBP7.81□□□□□ -1.16
CHD6-203ENST00000373233 SPG7Q9UQ90 795 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 NUCB2P80303 420 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 MVPQ14764 893 aaKnown RBP7.81□□□□□ -1.16
CHD6-203ENST00000373233 ANKRD45Q5TZF3 282 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 KRT222Q8N1A0 295 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 DNAAF4Q8WXU2 420 aa7.81□□□□□ -1.16
CHD6-203ENST00000373233 AK9Q5TCS8 1911 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms