RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
CHCHD1-202ENST00000372837 RRAGCQ9HB90 399 aa16.66■□□□□ 0.26
CHCHD1-202ENST00000372837 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
CHCHD1-202ENST00000372837 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
CHCHD1-202ENST00000372837 KCPQ6ZWJ8 1503 aa16.65■□□□□ 0.26
CHCHD1-202ENST00000372837 C10orf71Q711Q0 1435 aa16.65■□□□□ 0.26
CHCHD1-202ENST00000372837 C9orf131Q5VYM1 1079 aa16.65■□□□□ 0.26
CHCHD1-202ENST00000372837 NGEFQ8N5V2 710 aa16.65■□□□□ 0.26
CHCHD1-202ENST00000372837 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
CHCHD1-202ENST00000372837 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.26
CHCHD1-202ENST00000372837 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.25
CHCHD1-202ENST00000372837 TTC21AQ8NDW8 1320 aa16.64■□□□□ 0.25
CHCHD1-202ENST00000372837 C5P01031 1676 aa16.63■□□□□ 0.25
CHCHD1-202ENST00000372837 KDM2BQ8NHM5 1336 aa16.63■□□□□ 0.25
CHCHD1-202ENST00000372837 PLEKHG2Q9H7P9 1386 aa16.63■□□□□ 0.25
CHCHD1-202ENST00000372837 CENPJQ9HC77 1338 aaPredicted RBP16.62■□□□□ 0.25
CHCHD1-202ENST00000372837 A0A0G2JLW4 131 aa16.61■□□□□ 0.25
CHCHD1-202ENST00000372837 PHF14O94880 888 aa16.61■□□□□ 0.25
CHCHD1-202ENST00000372837 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
CHCHD1-202ENST00000372837 KIAA1551Q9HCM1 1747 aa16.61■□□□□ 0.25
CHCHD1-202ENST00000372837 TOGARAM1Q9Y4F4 1720 aa16.61■□□□□ 0.25
CHCHD1-202ENST00000372837 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.6■□□□□ 0.25
CHCHD1-202ENST00000372837 NEFMP07197 916 aa16.6■□□□□ 0.25
CHCHD1-202ENST00000372837 FOXN1O15353 648 aa16.59■□□□□ 0.25
CHCHD1-202ENST00000372837 TGFB2P61812 414 aa16.59■□□□□ 0.25
CHCHD1-202ENST00000372837 CENPQQ7L2Z9 268 aaPredicted RBP16.59■□□□□ 0.25
CHCHD1-202ENST00000372837 AK7Q96M32 723 aa16.59■□□□□ 0.25
CHCHD1-202ENST00000372837 PANK3Q9H999 370 aa16.59■□□□□ 0.25
CHCHD1-202ENST00000372837 FCHSD2O94868 740 aa16.58■□□□□ 0.24
CHCHD1-202ENST00000372837 GSE1Q14687 1217 aa16.58■□□□□ 0.24
CHCHD1-202ENST00000372837 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.58■□□□□ 0.24
CHCHD1-202ENST00000372837 PRDM10Q9NQV6 1147 aa16.58■□□□□ 0.24
CHCHD1-202ENST00000372837 N4BP2Q86UW6 1770 aaPredicted RBP16.58■□□□□ 0.24
CHCHD1-202ENST00000372837 TAF1LQ8IZX4 1826 aa16.57■□□□□ 0.24
CHCHD1-202ENST00000372837 AAMPQ13685 434 aa16.57■□□□□ 0.24
CHCHD1-202ENST00000372837 C4BP0C0L5 1744 aa16.56■□□□□ 0.24
CHCHD1-202ENST00000372837 USP31Q70CQ4 1352 aa16.56■□□□□ 0.24
CHCHD1-202ENST00000372837 PALLDQ8WX93 1383 aa16.56■□□□□ 0.24
CHCHD1-202ENST00000372837 PRKCSHP14314 528 aaPredicted RBP16.56■□□□□ 0.24
CHCHD1-202ENST00000372837 DPEP1P16444 411 aa16.56■□□□□ 0.24
CHCHD1-202ENST00000372837 EXOC6Q8TAG9 804 aa16.56■□□□□ 0.24
CHCHD1-202ENST00000372837 ZCRB1Q8TBF4 217 aaKnown RBP16.56■□□□□ 0.24
CHCHD1-202ENST00000372837 KNSTRNQ9Y448 316 aa16.56■□□□□ 0.24
CHCHD1-202ENST00000372837 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
CHCHD1-202ENST00000372837 MMP10P09238 476 aa16.55■□□□□ 0.24
CHCHD1-202ENST00000372837 HMGB2P26583 209 aaKnown RBP16.55■□□□□ 0.24
CHCHD1-202ENST00000372837 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
CHCHD1-202ENST00000372837 PKD1L3Q7Z443 1732 aa16.55■□□□□ 0.24
CHCHD1-202ENST00000372837 TNRC6CQ9HCJ0 1690 aaKnown RBP16.55■□□□□ 0.24
CHCHD1-202ENST00000372837 UBR3Q6ZT12 1888 aa16.54■□□□□ 0.24
CHCHD1-202ENST00000372837 LTN1O94822 1766 aa16.54■□□□□ 0.24
CHCHD1-202ENST00000372837 SSFA2P28290 1259 aa16.54■□□□□ 0.24
CHCHD1-202ENST00000372837 CNGB1Q14028 1251 aaPredicted RBP16.54■□□□□ 0.24
CHCHD1-202ENST00000372837 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
CHCHD1-202ENST00000372837 SBNO2Q9Y2G9 1366 aa16.53■□□□□ 0.24
CHCHD1-202ENST00000372837 ABHD8Q96I13 439 aa16.53■□□□□ 0.24
CHCHD1-202ENST00000372837 MEGF6O75095 1541 aa16.52■□□□□ 0.24
CHCHD1-202ENST00000372837 KCNA3P22001 575 aa16.52■□□□□ 0.24
CHCHD1-202ENST00000372837 MLLT1Q03111 559 aaPredicted RBP16.52■□□□□ 0.24
CHCHD1-202ENST00000372837 NME9Q86XW9 330 aa16.52■□□□□ 0.24
CHCHD1-202ENST00000372837 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.52■□□□□ 0.24
CHCHD1-202ENST00000372837 DAXXQ9UER7 740 aaPredicted RBP16.52■□□□□ 0.24
CHCHD1-202ENST00000372837 NSD3Q9BZ95 1437 aa16.52■□□□□ 0.23
CHCHD1-202ENST00000372837 IP6K1Q92551 441 aa16.51■□□□□ 0.23
CHCHD1-202ENST00000372837 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
CHCHD1-202ENST00000372837 WDR43Q15061 677 aaKnown RBP eCLIP16.5■□□□□ 0.23
CHCHD1-202ENST00000372837 CC2D1BQ5T0F9 858 aaKnown RBP16.5■□□□□ 0.23
CHCHD1-202ENST00000372837 EVC2Q86UK5 1308 aa16.49■□□□□ 0.23
CHCHD1-202ENST00000372837 BRCA1P38398 1863 aaKnown RBP16.49■□□□□ 0.23
CHCHD1-202ENST00000372837 CTCFP49711 727 aaPredicted RBP16.49■□□□□ 0.23
CHCHD1-202ENST00000372837 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
CHCHD1-202ENST00000372837 DCAF5Q96JK2 942 aa16.49■□□□□ 0.23
CHCHD1-202ENST00000372837 FAM208AQ9UK61 1670 aaKnown RBP16.49■□□□□ 0.23
CHCHD1-202ENST00000372837 VEGFAP15692 232 aaPredicted RBP16.48■□□□□ 0.23
CHCHD1-202ENST00000372837 RGS19P49795 217 aa16.48■□□□□ 0.23
CHCHD1-202ENST00000372837 MPRIPQ6WCQ1 1025 aa16.48■□□□□ 0.23
CHCHD1-202ENST00000372837 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
CHCHD1-202ENST00000372837 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
CHCHD1-202ENST00000372837 PPP2R1AP30153 589 aa16.46■□□□□ 0.23
CHCHD1-202ENST00000372837 LBX1P52954 281 aa16.46■□□□□ 0.23
CHCHD1-202ENST00000372837 AMER1Q5JTC6 1135 aaPredicted RBP16.46■□□□□ 0.23
CHCHD1-202ENST00000372837 FAM43AQ8N2R8 423 aa16.46■□□□□ 0.23
CHCHD1-202ENST00000372837 CREBZFQ9NS37 354 aa16.46■□□□□ 0.23
CHCHD1-202ENST00000372837 GNPATO15228 680 aa16.45■□□□□ 0.22
CHCHD1-202ENST00000372837 NFKBIBQ15653 356 aa16.45■□□□□ 0.22
CHCHD1-202ENST00000372837 SMARCC1Q92922 1105 aaPredicted RBP16.45■□□□□ 0.22
CHCHD1-202ENST00000372837 CCDC87Q9NVE4 849 aa16.45■□□□□ 0.22
CHCHD1-202ENST00000372837 PIM2Q9P1W9 311 aa16.45■□□□□ 0.22
CHCHD1-202ENST00000372837 MON2Q7Z3U7 1717 aa16.44■□□□□ 0.22
CHCHD1-202ENST00000372837 SBF1O95248 1867 aa16.44■□□□□ 0.22
CHCHD1-202ENST00000372837 GLTPD2A6NH11 291 aa16.43■□□□□ 0.22
CHCHD1-202ENST00000372837 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
CHCHD1-202ENST00000372837 DALRD3Q5D0E6 543 aaKnown RBP16.43■□□□□ 0.22
CHCHD1-202ENST00000372837 NLGN1Q8N2Q7 840 aa16.43■□□□□ 0.22
CHCHD1-202ENST00000372837 AIDAQ96BJ3 306 aa16.43■□□□□ 0.22
CHCHD1-202ENST00000372837 ZC3H4Q9UPT8 1303 aaKnown RBP16.43■□□□□ 0.22
CHCHD1-202ENST00000372837 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
CHCHD1-202ENST00000372837 POTECB2RU33 542 aa16.42■□□□□ 0.22
CHCHD1-202ENST00000372837 ITPK1Q13572 414 aa16.42■□□□□ 0.22
CHCHD1-202ENST00000372837 PUS7Q96PZ0 661 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms