RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SLC26A8Q96RN1 970 aa15.67■□□□□ 0.1
CTPS1-202ENST00000372621 PKP1Q13835 747 aa15.67■□□□□ 0.1
CTPS1-202ENST00000372621 AMOTL2Q9Y2J4 779 aa15.67■□□□□ 0.1
CTPS1-202ENST00000372621 LMBRD1Q9NUN5 540 aa15.65■□□□□ 0.1
CTPS1-202ENST00000372621 DDX49Q9Y6V7 483 aaKnown RBP15.65■□□□□ 0.1
CTPS1-202ENST00000372621 ERBB4Q15303 1308 aa15.65■□□□□ 0.1
CTPS1-202ENST00000372621 FLIIQ13045 1269 aa15.65■□□□□ 0.1
CTPS1-202ENST00000372621 ZGPATQ8N5A5 531 aaKnown RBP15.65■□□□□ 0.1
CTPS1-202ENST00000372621 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
CTPS1-202ENST00000372621 STK31Q9BXU1 1019 aa15.64■□□□□ 0.09
CTPS1-202ENST00000372621 EXOC6BQ9Y2D4 811 aa15.64■□□□□ 0.09
CTPS1-202ENST00000372621 TBX22Q9Y458 520 aa15.64■□□□□ 0.09
CTPS1-202ENST00000372621 ESPNB1AK53 854 aa15.64■□□□□ 0.09
CTPS1-202ENST00000372621 AMPHP49418 695 aa15.64■□□□□ 0.09
CTPS1-202ENST00000372621 ATP8B2P98198 1209 aa15.64■□□□□ 0.09
CTPS1-202ENST00000372621 MCTP1Q6DN14 999 aa15.64■□□□□ 0.09
CTPS1-202ENST00000372621 PXDNLA1KZ92 1463 aa15.63■□□□□ 0.09
CTPS1-202ENST00000372621 ZNF445P59923 1031 aa15.63■□□□□ 0.09
CTPS1-202ENST00000372621 CCDC30Q5VVM6 783 aa15.63■□□□□ 0.09
CTPS1-202ENST00000372621 SOS1Q07889 1333 aaPredicted RBP15.63■□□□□ 0.09
CTPS1-202ENST00000372621 PNMA6EA0A0J9YXQ4 647 aa15.63■□□□□ 0.09
CTPS1-202ENST00000372621 GNAI3P08754 354 aa15.63■□□□□ 0.09
CTPS1-202ENST00000372621 LRRCC1Q9C099 1032 aa15.63■□□□□ 0.09
CTPS1-202ENST00000372621 GNAT3A8MTJ3 354 aa15.62■□□□□ 0.09
CTPS1-202ENST00000372621 NGDNQ8NEJ9 315 aaKnown RBP15.62■□□□□ 0.09
CTPS1-202ENST00000372621 PPP1R9BQ96SB3 815 aa15.62■□□□□ 0.09
CTPS1-202ENST00000372621 ESYT1Q9BSJ8 1104 aa15.62■□□□□ 0.09
CTPS1-202ENST00000372621 EID1Q9Y6B2 187 aa15.62■□□□□ 0.09
CTPS1-202ENST00000372621 IL17RAQ96F46 866 aa15.62■□□□□ 0.09
CTPS1-202ENST00000372621 STAP2Q9UGK3 403 aa15.62■□□□□ 0.09
CTPS1-202ENST00000372621 MX1P20591 662 aa15.61■□□□□ 0.09
CTPS1-202ENST00000372621 TSHZ3Q63HK5 1081 aa15.61■□□□□ 0.09
CTPS1-202ENST00000372621 IL17REQ8NFR9 667 aa15.61■□□□□ 0.09
CTPS1-202ENST00000372621 BABAM1Q9NWV8 329 aa15.61■□□□□ 0.09
CTPS1-202ENST00000372621 ANKARQ7Z5J8 1434 aa15.61■□□□□ 0.09
CTPS1-202ENST00000372621 HOXC9P31274 260 aa15.61■□□□□ 0.09
CTPS1-202ENST00000372621 FKBP5Q13451 457 aaPredicted RBP15.61■□□□□ 0.09
CTPS1-202ENST00000372621 MAP3K5Q99683 1374 aa15.6■□□□□ 0.09
CTPS1-202ENST00000372621 CCDC173Q0VFZ6 552 aa15.6■□□□□ 0.09
CTPS1-202ENST00000372621 NASPP49321 788 aaPredicted RBP15.6■□□□□ 0.09
CTPS1-202ENST00000372621 CEBPAP49715 358 aaPredicted RBP15.6■□□□□ 0.09
CTPS1-202ENST00000372621 CHMLP26374 656 aa15.59■□□□□ 0.09
CTPS1-202ENST00000372621 NLRP6P59044 892 aa15.59■□□□□ 0.09
CTPS1-202ENST00000372621 ZSCAN23Q3MJ62 389 aa15.59■□□□□ 0.09
CTPS1-202ENST00000372621 TRIM44Q96DX7 344 aaPredicted RBP15.58■□□□□ 0.09
CTPS1-202ENST00000372621 TMX3Q96JJ7 454 aa15.58■□□□□ 0.09
CTPS1-202ENST00000372621 USP44Q9H0E7 712 aa15.58■□□□□ 0.09
CTPS1-202ENST00000372621 NEK4P51957 841 aa15.58■□□□□ 0.08
CTPS1-202ENST00000372621 ANAPC15P60006 121 aa15.58■□□□□ 0.08
CTPS1-202ENST00000372621 CUL4AQ13619 759 aa15.58■□□□□ 0.08
CTPS1-202ENST00000372621 GPT2Q8TD30 523 aa15.58■□□□□ 0.08
CTPS1-202ENST00000372621 LRRFIP2Q9Y608 721 aaKnown RBP15.58■□□□□ 0.08
CTPS1-202ENST00000372621 MCM2P49736 904 aa15.58■□□□□ 0.08
CTPS1-202ENST00000372621 TAF7Q15545 349 aaPredicted RBP15.58■□□□□ 0.08
CTPS1-202ENST00000372621 CAVIN1Q6NZI2 390 aaKnown RBP15.58■□□□□ 0.08
CTPS1-202ENST00000372621 SRCIN1Q9C0H9 1055 aa15.58■□□□□ 0.08
CTPS1-202ENST00000372621 PALD1Q9ULE6 856 aa15.58■□□□□ 0.08
CTPS1-202ENST00000372621 AOX1Q06278 1338 aa15.57■□□□□ 0.08
CTPS1-202ENST00000372621 NECTIN2Q92692 538 aa15.56■□□□□ 0.08
CTPS1-202ENST00000372621 MED1Q15648 1581 aaPredicted RBP15.56■□□□□ 0.08
CTPS1-202ENST00000372621 LTN1O94822 1766 aa15.56■□□□□ 0.08
CTPS1-202ENST00000372621 SSH3Q8TE77 659 aa15.56■□□□□ 0.08
CTPS1-202ENST00000372621 PRPF40AO75400 957 aaKnown RBP15.56■□□□□ 0.08
CTPS1-202ENST00000372621 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
CTPS1-202ENST00000372621 CEMIPQ8WUJ3 1361 aa15.55■□□□□ 0.08
CTPS1-202ENST00000372621 KDM3BQ7LBC6 1761 aa15.55■□□□□ 0.08
CTPS1-202ENST00000372621 EPB41L2O43491 1005 aaKnown RBP15.55■□□□□ 0.08
CTPS1-202ENST00000372621 BRD1O95696 1058 aa15.55■□□□□ 0.08
CTPS1-202ENST00000372621 INTS4Q96HW7 963 aaKnown RBP15.55■□□□□ 0.08
CTPS1-202ENST00000372621 MCCP23508 829 aa15.54■□□□□ 0.08
CTPS1-202ENST00000372621 POLA2Q14181 598 aa15.54■□□□□ 0.08
CTPS1-202ENST00000372621 RILPL2Q969X0 211 aa15.54■□□□□ 0.08
CTPS1-202ENST00000372621 TRIM6-TRIM34B2RNG4 842 aa15.53■□□□□ 0.08
CTPS1-202ENST00000372621 UBTFL1P0CB47 393 aaPredicted RBP15.53■□□□□ 0.08
CTPS1-202ENST00000372621 NCLP19338 710 aaKnown RBP15.53■□□□□ 0.08
CTPS1-202ENST00000372621 CHAMP1Q96JM3 812 aa15.53■□□□□ 0.08
CTPS1-202ENST00000372621 IL25Q9H293 177 aa15.53■□□□□ 0.08
CTPS1-202ENST00000372621 PHAXQ9H814 394 aaKnown RBP15.53■□□□□ 0.08
CTPS1-202ENST00000372621 NUTM2GQ5VZR2 741 aa15.53■□□□□ 0.08
CTPS1-202ENST00000372621 RBSNQ9H1K0 784 aa15.53■□□□□ 0.08
CTPS1-202ENST00000372621 ANO2Q9NQ90 1003 aa15.53■□□□□ 0.08
CTPS1-202ENST00000372621 CRYBG1Q9Y4K1 1723 aa15.53■□□□□ 0.08
CTPS1-202ENST00000372621 NAP1L5Q96NT1 182 aaPredicted RBP15.53■□□□□ 0.08
CTPS1-202ENST00000372621 PRIM1P49642 420 aaKnown RBP15.52■□□□□ 0.08
CTPS1-202ENST00000372621 HDGFL1Q5TGJ6 251 aa15.52■□□□□ 0.08
CTPS1-202ENST00000372621 RAB11FIP3O75154 756 aa15.52■□□□□ 0.07
CTPS1-202ENST00000372621 TMEM63CQ9P1W3 806 aa15.52■□□□□ 0.07
CTPS1-202ENST00000372621 RBM27Q9P2N5 1060 aaKnown RBP15.52■□□□□ 0.07
CTPS1-202ENST00000372621 NSFL1CQ9UNZ2 370 aaKnown RBP15.52■□□□□ 0.07
CTPS1-202ENST00000372621 FER1L4A9Z1Z3 1794 aa15.52■□□□□ 0.07
CTPS1-202ENST00000372621 ABTB2Q8N961 1025 aa15.51■□□□□ 0.07
CTPS1-202ENST00000372621 PDLIM2Q96JY6 352 aa15.51■□□□□ 0.07
CTPS1-202ENST00000372621 KCNA6P17658 529 aa15.51■□□□□ 0.07
CTPS1-202ENST00000372621 THEMISQ8N1K5 641 aaPredicted RBP15.51■□□□□ 0.07
CTPS1-202ENST00000372621 PI4K2BQ8TCG2 481 aa15.51■□□□□ 0.07
CTPS1-202ENST00000372621 ANP32BQ92688 251 aaKnown RBP15.51■□□□□ 0.07
CTPS1-202ENST00000372621 HSPA4P34932 840 aa15.51■□□□□ 0.07
CTPS1-202ENST00000372621 PPP1R42Q7Z4L9 355 aa15.51■□□□□ 0.07
CTPS1-202ENST00000372621 IL1RAPL2Q9NP60 686 aa15.51■□□□□ 0.07
CTPS1-202ENST00000372621 NFAT5O94916 1531 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms