RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 PNISRQ8TF01 805 aaKnown RBP33.35■■■□□ 2.93
C9orf50-201ENST00000372478 SMARCC1Q92922 1105 aaPredicted RBP33.35■■■□□ 2.93
C9orf50-201ENST00000372478 RUNDC1Q96C34 613 aa33.35■■■□□ 2.93
C9orf50-201ENST00000372478 LRRC4BQ9NT99 713 aa33.35■■■□□ 2.93
C9orf50-201ENST00000372478 MCM10Q7L590 875 aa33.34■■■□□ 2.93
C9orf50-201ENST00000372478 MIER1Q8N108 512 aa33.34■■■□□ 2.93
C9orf50-201ENST00000372478 RTF1Q92541 710 aaKnown RBP33.34■■■□□ 2.93
C9orf50-201ENST00000372478 DCTN1Q14203 1278 aa33.33■■■□□ 2.93
C9orf50-201ENST00000372478 CCNL1Q9UK58 526 aaPredicted RBP33.32■■■□□ 2.92
C9orf50-201ENST00000372478 SIPA1L3O60292 1781 aaPredicted RBP33.32■■■□□ 2.92
C9orf50-201ENST00000372478 CEMIPQ8WUJ3 1361 aa33.31■■■□□ 2.92
C9orf50-201ENST00000372478 TEFQ10587 303 aa33.31■■■□□ 2.92
C9orf50-201ENST00000372478 SLC27A3Q5K4L6 730 aa33.31■■■□□ 2.92
C9orf50-201ENST00000372478 RRP7AQ9Y3A4 280 aaKnown RBP33.31■■■□□ 2.92
C9orf50-201ENST00000372478 HTATSF1O43719 755 aaKnown RBP33.29■■■□□ 2.92
C9orf50-201ENST00000372478 TMPOP42166 694 aaKnown RBP33.29■■■□□ 2.92
C9orf50-201ENST00000372478 ANO8Q9HCE9 1232 aaPredicted RBP33.29■■■□□ 2.92
C9orf50-201ENST00000372478 PAPPAQ13219 1627 aa33.28■■■□□ 2.92
C9orf50-201ENST00000372478 RIPK4P57078 832 aa33.28■■■□□ 2.92
C9orf50-201ENST00000372478 NBPF14Q5TI25 921 aa33.28■■■□□ 2.92
C9orf50-201ENST00000372478 NEUROD2Q15784 382 aa33.27■■■□□ 2.92
C9orf50-201ENST00000372478 LOC102724428A0A0B4J2F2 783 aa33.26■■■□□ 2.91
C9orf50-201ENST00000372478 PSDA5PKW4 1024 aaPredicted RBP33.26■■■□□ 2.91
C9orf50-201ENST00000372478 SIK1P57059 783 aa33.26■■■□□ 2.91
C9orf50-201ENST00000372478 SLC39A6Q13433 755 aa33.26■■■□□ 2.91
C9orf50-201ENST00000372478 TAF1LQ8IZX4 1826 aa33.26■■■□□ 2.91
C9orf50-201ENST00000372478 R3HDM1Q15032 1099 aaKnown RBP33.25■■■□□ 2.91
C9orf50-201ENST00000372478 RBM42Q9BTD8 480 aaKnown RBP33.25■■■□□ 2.91
C9orf50-201ENST00000372478 C5P01031 1676 aa33.25■■■□□ 2.91
C9orf50-201ENST00000372478 THUMPD2Q9BTF0 503 aaKnown RBP33.24■■■□□ 2.91
C9orf50-201ENST00000372478 PTCD1O75127 700 aaKnown RBP33.24■■■□□ 2.91
C9orf50-201ENST00000372478 APAF1O14727 1248 aa33.21■■■□□ 2.91
C9orf50-201ENST00000372478 FAM9BQ8IZU0 186 aa33.21■■■□□ 2.91
C9orf50-201ENST00000372478 ATP6V1AP38606 617 aa33.2■■■□□ 2.91
C9orf50-201ENST00000372478 SLC4A9Q96Q91 983 aa33.2■■■□□ 2.91
C9orf50-201ENST00000372478 STK32BQ9NY57 414 aa33.2■■■□□ 2.91
C9orf50-201ENST00000372478 ZNF827Q17R98 1081 aa33.2■■■□□ 2.9
C9orf50-201ENST00000372478 ITPK1Q13572 414 aa33.19■■■□□ 2.9
C9orf50-201ENST00000372478 UBR2Q8IWV8 1755 aa33.18■■■□□ 2.9
C9orf50-201ENST00000372478 SENP3-EIF4A1A0A087X0R7 540 aa33.18■■■□□ 2.9
C9orf50-201ENST00000372478 BTBD11A6QL63 1104 aa33.17■■■□□ 2.9
C9orf50-201ENST00000372478 SLC15A2Q16348 729 aa33.17■■■□□ 2.9
C9orf50-201ENST00000372478 KCPQ6ZWJ8 1503 aa33.17■■■□□ 2.9
C9orf50-201ENST00000372478 ZNF831Q5JPB2 1677 aa33.17■■■□□ 2.9
C9orf50-201ENST00000372478 LMOD3Q0VAK6 560 aa33.17■■■□□ 2.9
C9orf50-201ENST00000372478 TRIM35Q9UPQ4 493 aa33.16■■■□□ 2.9
C9orf50-201ENST00000372478 CCER2I3L3R5 266 aa33.15■■■□□ 2.9
C9orf50-201ENST00000372478 TTC5Q8N0Z6 440 aa33.15■■■□□ 2.9
C9orf50-201ENST00000372478 AKT1S1Q96B36 256 aa33.15■■■□□ 2.9
C9orf50-201ENST00000372478 C4BP0C0L5 1744 aa33.15■■■□□ 2.9
C9orf50-201ENST00000372478 TUBGCP6Q96RT7 1819 aa33.15■■■□□ 2.9
C9orf50-201ENST00000372478 KCNQ3O43525 872 aa33.14■■■□□ 2.9
C9orf50-201ENST00000372478 ZNF790Q6PG37 636 aa33.14■■■□□ 2.9
C9orf50-201ENST00000372478 LINC00116Q8NCU8 138 aa33.14■■■□□ 2.9
C9orf50-201ENST00000372478 TJP1Q07157 1748 aa33.14■■■□□ 2.9
C9orf50-201ENST00000372478 TAF7Q15545 349 aaPredicted RBP33.13■■■□□ 2.89
C9orf50-201ENST00000372478 MIS18AQ9NYP9 233 aa33.13■■■□□ 2.89
C9orf50-201ENST00000372478 COL5A3P25940 1745 aaPredicted RBP33.12■■■□□ 2.89
C9orf50-201ENST00000372478 ZNF496Q96IT1 587 aaPredicted RBP33.1■■■□□ 2.89
C9orf50-201ENST00000372478 TFCP2L1Q9NZI6 479 aa33.09■■■□□ 2.89
C9orf50-201ENST00000372478 CICQ96RK0 1608 aaPredicted RBP33.08■■■□□ 2.89
C9orf50-201ENST00000372478 KDM3BQ7LBC6 1761 aa33.08■■■□□ 2.89
C9orf50-201ENST00000372478 PDGFDQ9GZP0 370 aaPredicted RBP33.08■■■□□ 2.89
C9orf50-201ENST00000372478 DNAJC10Q8IXB1 793 aa33.07■■■□□ 2.88
C9orf50-201ENST00000372478 QSER1Q2KHR3 1735 aa33.07■■■□□ 2.88
C9orf50-201ENST00000372478 HMGB2P26583 209 aaKnown RBP33.06■■■□□ 2.88
C9orf50-201ENST00000372478 AK7Q96M32 723 aa33.06■■■□□ 2.88
C9orf50-201ENST00000372478 CASZ1Q86V15 1759 aa33.06■■■□□ 2.88
C9orf50-201ENST00000372478 UBR3Q6ZT12 1888 aa33.05■■■□□ 2.88
C9orf50-201ENST00000372478 MYH14Q7Z406 1995 aaKnown RBP33.04■■■□□ 2.88
C9orf50-201ENST00000372478 FMNL2Q96PY5 1086 aa33.04■■■□□ 2.88
C9orf50-201ENST00000372478 HEG1Q9ULI3 1381 aa33.04■■■□□ 2.88
C9orf50-201ENST00000372478 VSIG10Q8N0Z9 540 aa33.02■■■□□ 2.88
C9orf50-201ENST00000372478 PNPLA7Q6ZV29 1317 aa33.02■■■□□ 2.88
C9orf50-201ENST00000372478 SMIM5Q71RC9 77 aa33.02■■■□□ 2.88
C9orf50-201ENST00000372478 AMIGO3Q86WK7 504 aa33.02■■■□□ 2.88
C9orf50-201ENST00000372478 GNPATO15228 680 aa33■■■□□ 2.87
C9orf50-201ENST00000372478 TSPYL4Q9UJ04 414 aa33■■■□□ 2.87
C9orf50-201ENST00000372478 SALL2Q9Y467 1007 aaPredicted RBP33■■■□□ 2.87
C9orf50-201ENST00000372478 LAS1LQ9Y4W2 734 aaKnown RBP33■■■□□ 2.87
C9orf50-201ENST00000372478 CNTNAP4Q9C0A0 1308 aa32.99■■■□□ 2.87
C9orf50-201ENST00000372478 CRKLP46109 303 aaKnown RBP32.99■■■□□ 2.87
C9orf50-201ENST00000372478 PHF14O94880 888 aa32.98■■■□□ 2.87
C9orf50-201ENST00000372478 CYP19A1P11511 503 aaPredicted RBP32.98■■■□□ 2.87
C9orf50-201ENST00000372478 RC3H1Q5TC82 1133 aaKnown RBP32.97■■■□□ 2.87
C9orf50-201ENST00000372478 PRAMEF22A3QJZ6 481 aa32.96■■■□□ 2.87
C9orf50-201ENST00000372478 COL23A1Q86Y22 540 aaPredicted RBP32.95■■■□□ 2.87
C9orf50-201ENST00000372478 MSH5O43196 834 aa32.95■■■□□ 2.86
C9orf50-201ENST00000372478 EIF4A1P60842 406 aaKnown RBP32.95■■■□□ 2.86
C9orf50-201ENST00000372478 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.94■■■□□ 2.86
C9orf50-201ENST00000372478 CCDC27Q2M243 656 aa32.94■■■□□ 2.86
C9orf50-201ENST00000372478 INTS5Q6P9B9 1019 aaKnown RBP32.94■■■□□ 2.86
C9orf50-201ENST00000372478 BABAM1Q9NWV8 329 aa32.94■■■□□ 2.86
C9orf50-201ENST00000372478 CHL1O00533 1208 aa32.93■■■□□ 2.86
C9orf50-201ENST00000372478 ZBTB7AO95365 584 aa32.93■■■□□ 2.86
C9orf50-201ENST00000372478 WWC1Q8IX03 1113 aa32.93■■■□□ 2.86
C9orf50-201ENST00000372478 CCDC87Q9NVE4 849 aa32.93■■■□□ 2.86
C9orf50-201ENST00000372478 SNRPA1P09661 255 aaKnown RBP32.92■■■□□ 2.86
C9orf50-201ENST00000372478 TEX13AQ9BXU3 409 aaPredicted RBP32.92■■■□□ 2.86
C9orf50-201ENST00000372478 RTCBQ9Y3I0 505 aaKnown RBP32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms