RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 PTF1AQ7RTS3 328 aa20.76■□□□□ 0.91
C9orf78-201ENST00000372447 TRIM35Q9UPQ4 493 aa20.76■□□□□ 0.91
C9orf78-201ENST00000372447 NCBP3Q53F19 620 aaKnown RBP20.75■□□□□ 0.91
C9orf78-201ENST00000372447 SYTL4Q96C24 671 aaPredicted RBP20.75■□□□□ 0.91
C9orf78-201ENST00000372447 ERVV-2B6SEH9 535 aa20.74■□□□□ 0.91
C9orf78-201ENST00000372447 PLIN1O60240 522 aa20.74■□□□□ 0.91
C9orf78-201ENST00000372447 TRIM37O94972 964 aa20.74■□□□□ 0.91
C9orf78-201ENST00000372447 DLG5Q8TDM6 1919 aa20.74■□□□□ 0.91
C9orf78-201ENST00000372447 CCDC27Q2M243 656 aa20.74■□□□□ 0.91
C9orf78-201ENST00000372447 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
C9orf78-201ENST00000372447 CEMIPQ8WUJ3 1361 aa20.73■□□□□ 0.91
C9orf78-201ENST00000372447 NFATC2IPQ8NCF5 419 aa20.73■□□□□ 0.91
C9orf78-201ENST00000372447 THUMPD2Q9BTF0 503 aaKnown RBP20.73■□□□□ 0.91
C9orf78-201ENST00000372447 TOGARAM1Q9Y4F4 1720 aa20.73■□□□□ 0.91
C9orf78-201ENST00000372447 CABP4P57796 275 aa20.72■□□□□ 0.91
C9orf78-201ENST00000372447 LMOD3Q0VAK6 560 aa20.72■□□□□ 0.91
C9orf78-201ENST00000372447 PIGBQ92521 554 aa20.72■□□□□ 0.91
C9orf78-201ENST00000372447 BCL11BQ9C0K0 894 aaPredicted RBP20.72■□□□□ 0.91
C9orf78-201ENST00000372447 SLC52A2Q9HAB3 445 aa20.72■□□□□ 0.91
C9orf78-201ENST00000372447 ADAMTS7Q9UKP4 1686 aa20.71■□□□□ 0.91
C9orf78-201ENST00000372447 DOT1LQ8TEK3 1739 aa20.71■□□□□ 0.91
C9orf78-201ENST00000372447 WDR63Q8IWG1 891 aa20.71■□□□□ 0.91
C9orf78-201ENST00000372447 TMOD3Q9NYL9 352 aa20.71■□□□□ 0.91
C9orf78-201ENST00000372447 SBF2Q86WG5 1849 aa20.71■□□□□ 0.91
C9orf78-201ENST00000372447 SCN11AQ9UI33 1791 aa20.7■□□□□ 0.9
C9orf78-201ENST00000372447 TEFQ10587 303 aa20.69■□□□□ 0.9
C9orf78-201ENST00000372447 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.69■□□□□ 0.9
C9orf78-201ENST00000372447 NHSQ6T4R5 1651 aa20.67■□□□□ 0.9
C9orf78-201ENST00000372447 MRC1P22897 1456 aa20.67■□□□□ 0.9
C9orf78-201ENST00000372447 CRBNQ96SW2 442 aa20.67■□□□□ 0.9
C9orf78-201ENST00000372447 ITGB4P16144 1822 aa20.67■□□□□ 0.9
C9orf78-201ENST00000372447 VIRMAQ69YN4 1812 aaKnown RBP20.66■□□□□ 0.9
C9orf78-201ENST00000372447 TAF7Q15545 349 aaPredicted RBP20.65■□□□□ 0.9
C9orf78-201ENST00000372447 UPF1Q92900 1129 aaKnown RBP eCLIP20.65■□□□□ 0.93e-8■■□□□ 11.4
C9orf78-201ENST00000372447 APBA3O96018 575 aa20.64■□□□□ 0.9
C9orf78-201ENST00000372447 C20orf194Q5TEA3 1177 aa20.64■□□□□ 0.9
C9orf78-201ENST00000372447 ASAP1Q9ULH1 1129 aa20.64■□□□□ 0.9
C9orf78-201ENST00000372447 RBM19Q9Y4C8 960 aaKnown RBP20.64■□□□□ 0.9
C9orf78-201ENST00000372447 ATG3Q9NT62 314 aa20.64■□□□□ 0.89
C9orf78-201ENST00000372447 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.89
C9orf78-201ENST00000372447 BTBD11A6QL63 1104 aa20.63■□□□□ 0.89
C9orf78-201ENST00000372447 SLC39A6Q13433 755 aa20.63■□□□□ 0.89
C9orf78-201ENST00000372447 CCDC125Q86Z20 511 aa20.63■□□□□ 0.89
C9orf78-201ENST00000372447 BTAF1O14981 1849 aa20.61■□□□□ 0.89
C9orf78-201ENST00000372447 SF3B2Q13435 895 aaKnown RBP20.61■□□□□ 0.89
C9orf78-201ENST00000372447 KCNQ3O43525 872 aa20.6■□□□□ 0.89
C9orf78-201ENST00000372447 BCAR3O75815 825 aa20.6■□□□□ 0.89
C9orf78-201ENST00000372447 CALD1Q05682 793 aaKnown RBP20.6■□□□□ 0.89
C9orf78-201ENST00000372447 ZNF790Q6PG37 636 aa20.6■□□□□ 0.89
C9orf78-201ENST00000372447 MYH16Q9H6N6 1097 aa20.6■□□□□ 0.89
C9orf78-201ENST00000372447 LAS1LQ9Y4W2 734 aaKnown RBP20.6■□□□□ 0.89
C9orf78-201ENST00000372447 SIPA1L3O60292 1781 aaPredicted RBP20.6■□□□□ 0.89
C9orf78-201ENST00000372447 TNS1Q9HBL0 1735 aaKnown RBP20.59■□□□□ 0.89
C9orf78-201ENST00000372447 PLSCR1O15162 318 aa20.59■□□□□ 0.89
C9orf78-201ENST00000372447 CFAP44Q96MT7 982 aa20.59■□□□□ 0.89
C9orf78-201ENST00000372447 CHL1O00533 1208 aa20.59■□□□□ 0.89
C9orf78-201ENST00000372447 ZNF853P0CG23 659 aa20.59■□□□□ 0.89
C9orf78-201ENST00000372447 SMARCC1Q92922 1105 aaPredicted RBP20.59■□□□□ 0.89
C9orf78-201ENST00000372447 PALLDQ8WX93 1383 aa20.58■□□□□ 0.89
C9orf78-201ENST00000372447 EN1Q05925 392 aaPredicted RBP20.58■□□□□ 0.89
C9orf78-201ENST00000372447 DEFB132Q7Z7B7 95 aa20.58■□□□□ 0.89
C9orf78-201ENST00000372447 IFT57Q9NWB7 429 aa20.58■□□□□ 0.89
C9orf78-201ENST00000372447 BABAM1Q9NWV8 329 aa20.57■□□□□ 0.88
C9orf78-201ENST00000372447 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
C9orf78-201ENST00000372447 PTCD1O75127 700 aaKnown RBP20.57■□□□□ 0.88
C9orf78-201ENST00000372447 BAG6P46379 1132 aa20.57■□□□□ 0.88
C9orf78-201ENST00000372447 GNAI1P63096 354 aa20.57■□□□□ 0.88
C9orf78-201ENST00000372447 TTC5Q8N0Z6 440 aa20.57■□□□□ 0.88
C9orf78-201ENST00000372447 IL16Q14005 1332 aa20.56■□□□□ 0.88
C9orf78-201ENST00000372447 PROM2Q8N271 834 aa20.56■□□□□ 0.88
C9orf78-201ENST00000372447 CAMKK2Q96RR4 588 aa20.56■□□□□ 0.88
C9orf78-201ENST00000372447 ZNF496Q96IT1 587 aaPredicted RBP20.55■□□□□ 0.88
C9orf78-201ENST00000372447 RBM42Q9BTD8 480 aaKnown RBP20.55■□□□□ 0.88
C9orf78-201ENST00000372447 MBIPQ9NS73 344 aa20.55■□□□□ 0.88
C9orf78-201ENST00000372447 EZH2Q15910 746 aaKnown RBP20.54■□□□□ 0.88
C9orf78-201ENST00000372447 SLC4A9Q96Q91 983 aa20.54■□□□□ 0.88
C9orf78-201ENST00000372447 LOC102724428A0A0B4J2F2 783 aa20.54■□□□□ 0.88
C9orf78-201ENST00000372447 RARSP54136 660 aaKnown RBP20.54■□□□□ 0.88
C9orf78-201ENST00000372447 KCNQ4P56696 695 aa20.54■□□□□ 0.88
C9orf78-201ENST00000372447 SIK1P57059 783 aa20.54■□□□□ 0.88
C9orf78-201ENST00000372447 TXNRD1Q16881 649 aa20.54■□□□□ 0.88
C9orf78-201ENST00000372447 PAPPAQ13219 1627 aa20.53■□□□□ 0.88
C9orf78-201ENST00000372447 EIF4A1P60842 406 aaKnown RBP20.52■□□□□ 0.88
C9orf78-201ENST00000372447 TSR2Q969E8 191 aaKnown RBP20.52■□□□□ 0.88
C9orf78-201ENST00000372447 LRRC4BQ9NT99 713 aa20.52■□□□□ 0.88
C9orf78-201ENST00000372447 PDE3AQ14432 1141 aa20.51■□□□□ 0.87
C9orf78-201ENST00000372447 KCPQ6ZWJ8 1503 aa20.51■□□□□ 0.87
C9orf78-201ENST00000372447 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
C9orf78-201ENST00000372447 CCNL1Q9UK58 526 aaPredicted RBP20.51■□□□□ 0.87
C9orf78-201ENST00000372447 FANCIQ9NVI1 1328 aa20.51■□□□□ 0.87
C9orf78-201ENST00000372447 CT47B1P0C2W7 299 aaPredicted RBP20.51■□□□□ 0.87
C9orf78-201ENST00000372447 ATP6V1AP38606 617 aa20.51■□□□□ 0.87
C9orf78-201ENST00000372447 KDM3BQ7LBC6 1761 aa20.5■□□□□ 0.87
C9orf78-201ENST00000372447 SLC27A3Q5K4L6 730 aa20.5■□□□□ 0.87
C9orf78-201ENST00000372447 LY75O60449 1722 aa20.49■□□□□ 0.87
C9orf78-201ENST00000372447 CANXP27824 592 aaKnown RBP20.49■□□□□ 0.87
C9orf78-201ENST00000372447 KRT24Q2M2I5 525 aa20.49■□□□□ 0.87
C9orf78-201ENST00000372447 UBR2Q8IWV8 1755 aa20.49■□□□□ 0.87
C9orf78-201ENST00000372447 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
C9orf78-201ENST00000372447 ITPK1Q13572 414 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms