RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 MRC1P22897 1456 aa19.43■□□□□ 0.7
YIPF3-202ENST00000372422 BTBD11A6QL63 1104 aa19.43■□□□□ 0.7
YIPF3-202ENST00000372422 CT47B1P0C2W7 299 aaPredicted RBP19.42■□□□□ 0.7
YIPF3-202ENST00000372422 ILDR1Q86SU0 546 aaPredicted RBP19.42■□□□□ 0.7
YIPF3-202ENST00000372422 SEPT12Q8IYM1 358 aa19.42■□□□□ 0.7
YIPF3-202ENST00000372422 VIRMAQ69YN4 1812 aaKnown RBP19.42■□□□□ 0.7
YIPF3-202ENST00000372422 MARCH10Q8NA82 808 aaPredicted RBP19.41■□□□□ 0.7
YIPF3-202ENST00000372422 NFATC2IPQ8NCF5 419 aa19.41■□□□□ 0.7
YIPF3-202ENST00000372422 RXRBP28702 533 aa19.4■□□□□ 0.7
YIPF3-202ENST00000372422 EXOSC9Q06265 439 aaKnown RBP19.4■□□□□ 0.7
YIPF3-202ENST00000372422 MIS18AQ9NYP9 233 aa19.4■□□□□ 0.7
YIPF3-202ENST00000372422 TMOD3Q9NYL9 352 aa19.4■□□□□ 0.7
YIPF3-202ENST00000372422 RCAN3Q9UKA8 241 aa19.39■□□□□ 0.69
YIPF3-202ENST00000372422 SIPA1L3O60292 1781 aaPredicted RBP19.38■□□□□ 0.69
YIPF3-202ENST00000372422 TTC5Q8N0Z6 440 aa19.37■□□□□ 0.69
YIPF3-202ENST00000372422 ZNF428Q96B54 188 aa19.36■□□□□ 0.69
YIPF3-202ENST00000372422 RGS17Q9UGC6 210 aaPredicted RBP19.36■□□□□ 0.69
YIPF3-202ENST00000372422 SOS1Q07889 1333 aaPredicted RBP19.36■□□□□ 0.69
YIPF3-202ENST00000372422 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
YIPF3-202ENST00000372422 ZNF790Q6PG37 636 aa19.36■□□□□ 0.69
YIPF3-202ENST00000372422 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
YIPF3-202ENST00000372422 TOGARAM1Q9Y4F4 1720 aa19.35■□□□□ 0.69
YIPF3-202ENST00000372422 NEFLP07196 543 aa19.35■□□□□ 0.69
YIPF3-202ENST00000372422 KDM3BQ7LBC6 1761 aa19.35■□□□□ 0.69
YIPF3-202ENST00000372422 KRT27Q7Z3Y8 459 aa19.34■□□□□ 0.69
YIPF3-202ENST00000372422 CHMP4AQ9BY43 222 aa19.34■□□□□ 0.69
YIPF3-202ENST00000372422 BCL9O00512 1426 aa19.34■□□□□ 0.69
YIPF3-202ENST00000372422 PRIM1P49642 420 aaKnown RBP19.33■□□□□ 0.69
YIPF3-202ENST00000372422 EIF4A1P60842 406 aaKnown RBP19.33■□□□□ 0.69
YIPF3-202ENST00000372422 C8orf58Q8NAV2 365 aa19.33■□□□□ 0.69
YIPF3-202ENST00000372422 DOT1LQ8TEK3 1739 aa19.33■□□□□ 0.68
YIPF3-202ENST00000372422 ELL2O00472 640 aaPredicted RBP19.32■□□□□ 0.68
YIPF3-202ENST00000372422 PIGBQ92521 554 aa19.32■□□□□ 0.68
YIPF3-202ENST00000372422 VAMP4O75379 141 aa19.32■□□□□ 0.68
YIPF3-202ENST00000372422 HOXB7P09629 217 aa19.32■□□□□ 0.68
YIPF3-202ENST00000372422 SLC39A6Q13433 755 aa19.32■□□□□ 0.68
YIPF3-202ENST00000372422 POTEAQ6S8J7 498 aa19.32■□□□□ 0.68
YIPF3-202ENST00000372422 ACSBG1Q96GR2 724 aa19.32■□□□□ 0.68
YIPF3-202ENST00000372422 KCNQ3O43525 872 aa19.31■□□□□ 0.68
YIPF3-202ENST00000372422 TSPYL6Q8N831 410 aa19.31■□□□□ 0.68
YIPF3-202ENST00000372422 FMNL2Q96PY5 1086 aa19.31■□□□□ 0.68
YIPF3-202ENST00000372422 ITGB4P16144 1822 aa19.3■□□□□ 0.68
YIPF3-202ENST00000372422 RARSP54136 660 aaKnown RBP19.29■□□□□ 0.68
YIPF3-202ENST00000372422 KRT24Q2M2I5 525 aa19.29■□□□□ 0.68
YIPF3-202ENST00000372422 ALDH1L2Q3SY69 923 aa19.29■□□□□ 0.68
YIPF3-202ENST00000372422 FAM196AQ6ZSG2 479 aa19.29■□□□□ 0.68
YIPF3-202ENST00000372422 PAPPAQ13219 1627 aa19.28■□□□□ 0.68
YIPF3-202ENST00000372422 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.68
YIPF3-202ENST00000372422 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.68
YIPF3-202ENST00000372422 RGS12O14924 1447 aa19.27■□□□□ 0.68
YIPF3-202ENST00000372422 HEG1Q9ULI3 1381 aa19.27■□□□□ 0.68
YIPF3-202ENST00000372422 GIGYF1O75420 1035 aaPredicted RBP19.27■□□□□ 0.67
YIPF3-202ENST00000372422 SNRPA1P09661 255 aaKnown RBP19.27■□□□□ 0.67
YIPF3-202ENST00000372422 FAM182BQ5T319 152 aa19.27■□□□□ 0.67
YIPF3-202ENST00000372422 SMARCC1Q92922 1105 aaPredicted RBP19.27■□□□□ 0.67
YIPF3-202ENST00000372422 ATG3Q9NT62 314 aa19.27■□□□□ 0.67
YIPF3-202ENST00000372422 SMC4Q9NTJ3 1288 aa19.27■□□□□ 0.67
YIPF3-202ENST00000372422 KAT6BQ8WYB5 2073 aa19.27■□□□□ 0.67
YIPF3-202ENST00000372422 CCDC30Q5VVM6 783 aa19.26■□□□□ 0.67
YIPF3-202ENST00000372422 ASAP1Q9ULH1 1129 aa19.26■□□□□ 0.67
YIPF3-202ENST00000372422 BRWD3Q6RI45 1802 aa19.25■□□□□ 0.67
YIPF3-202ENST00000372422 HDGFL1Q5TGJ6 251 aa19.25■□□□□ 0.67
YIPF3-202ENST00000372422 SSH1Q8WYL5 1049 aa19.25■□□□□ 0.67
YIPF3-202ENST00000372422 STK31Q9BXU1 1019 aa19.25■□□□□ 0.67
YIPF3-202ENST00000372422 KCNQ2O43526 872 aa19.24■□□□□ 0.67
YIPF3-202ENST00000372422 PTCD1O75127 700 aaKnown RBP19.24■□□□□ 0.67
YIPF3-202ENST00000372422 NHSQ6T4R5 1651 aa19.24■□□□□ 0.67
YIPF3-202ENST00000372422 UBR2Q8IWV8 1755 aa19.24■□□□□ 0.67
YIPF3-202ENST00000372422 KCPQ6ZWJ8 1503 aa19.24■□□□□ 0.67
YIPF3-202ENST00000372422 BCAR3O75815 825 aa19.23■□□□□ 0.67
YIPF3-202ENST00000372422 FKBP8Q14318 412 aa19.23■□□□□ 0.67
YIPF3-202ENST00000372422 VSIG10Q8N0Z9 540 aa19.23■□□□□ 0.67
YIPF3-202ENST00000372422 BCL2L13Q9BXK5 485 aa19.23■□□□□ 0.67
YIPF3-202ENST00000372422 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
YIPF3-202ENST00000372422 CANXP27824 592 aaKnown RBP19.23■□□□□ 0.67
YIPF3-202ENST00000372422 RRP1P56182 461 aaKnown RBP19.23■□□□□ 0.67
YIPF3-202ENST00000372422 EIF2S2P20042 333 aaKnown RBP19.22■□□□□ 0.67
YIPF3-202ENST00000372422 BRPF1P55201 1214 aaPredicted RBP19.22■□□□□ 0.67
YIPF3-202ENST00000372422 RBM42Q9BTD8 480 aaKnown RBP19.22■□□□□ 0.67
YIPF3-202ENST00000372422 TEX13AQ9BXU3 409 aaPredicted RBP19.22■□□□□ 0.67
YIPF3-202ENST00000372422 BCL11BQ9C0K0 894 aaPredicted RBP19.22■□□□□ 0.67
YIPF3-202ENST00000372422 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
YIPF3-202ENST00000372422 PALLDQ8WX93 1383 aa19.21■□□□□ 0.67
YIPF3-202ENST00000372422 IPO8O15397 1037 aaKnown RBP19.2■□□□□ 0.66
YIPF3-202ENST00000372422 MRPL50Q8N5N7 158 aaKnown RBP19.19■□□□□ 0.66
YIPF3-202ENST00000372422 FRAT1Q92837 279 aaPredicted RBP19.19■□□□□ 0.66
YIPF3-202ENST00000372422 TCERG1O14776 1098 aaKnown RBP19.19■□□□□ 0.66
YIPF3-202ENST00000372422 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
YIPF3-202ENST00000372422 NECTIN2Q92692 538 aa19.19■□□□□ 0.66
YIPF3-202ENST00000372422 DBF4Q9UBU7 674 aaPredicted RBP19.19■□□□□ 0.66
YIPF3-202ENST00000372422 SBF2Q86WG5 1849 aa19.18■□□□□ 0.66
YIPF3-202ENST00000372422 PRAMEF22A3QJZ6 481 aa19.18■□□□□ 0.66
YIPF3-202ENST00000372422 ZKSCAN2Q63HK3 967 aa19.18■□□□□ 0.66
YIPF3-202ENST00000372422 ERBB4Q15303 1308 aa19.17■□□□□ 0.66
YIPF3-202ENST00000372422 LOC102724428A0A0B4J2F2 783 aa19.17■□□□□ 0.66
YIPF3-202ENST00000372422 STARD3NLO95772 234 aa19.17■□□□□ 0.66
YIPF3-202ENST00000372422 MS4A1P11836 297 aa19.17■□□□□ 0.66
YIPF3-202ENST00000372422 SIK1P57059 783 aa19.17■□□□□ 0.66
YIPF3-202ENST00000372422 ERICH6BQ5W0A0 696 aa19.16■□□□□ 0.66
YIPF3-202ENST00000372422 NOB1Q9ULX3 412 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms