RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
TMEM254-201ENST00000372273 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
TMEM254-201ENST00000372273 MAPK8IP3Q9UPT6 1336 aa12.6□□□□□ -0.39
TMEM254-201ENST00000372273 TNS1Q9HBL0 1735 aaKnown RBP12.6□□□□□ -0.39
TMEM254-201ENST00000372273 TOGARAM1Q9Y4F4 1720 aa12.6□□□□□ -0.39
TMEM254-201ENST00000372273 PDGFDQ9GZP0 370 aaPredicted RBP12.6□□□□□ -0.39
TMEM254-201ENST00000372273 ANO8Q9HCE9 1232 aaPredicted RBP12.6□□□□□ -0.39
TMEM254-201ENST00000372273 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
TMEM254-201ENST00000372273 MAP3K5Q99683 1374 aa12.59□□□□□ -0.39
TMEM254-201ENST00000372273 ERVV-2B6SEH9 535 aa12.59□□□□□ -0.39
TMEM254-201ENST00000372273 APAF1O14727 1248 aa12.59□□□□□ -0.39
TMEM254-201ENST00000372273 HSP90AB1P08238 724 aaKnown RBP12.59□□□□□ -0.39
TMEM254-201ENST00000372273 RIPK4P57078 832 aa12.59□□□□□ -0.39
TMEM254-201ENST00000372273 SLC52A2Q9HAB3 445 aa12.59□□□□□ -0.39
TMEM254-201ENST00000372273 KCNQ3O43525 872 aa12.58□□□□□ -0.39
TMEM254-201ENST00000372273 SLC4A9Q96Q91 983 aa12.58□□□□□ -0.39
TMEM254-201ENST00000372273 RBM42Q9BTD8 480 aaKnown RBP12.58□□□□□ -0.39
TMEM254-201ENST00000372273 PALLDQ8WX93 1383 aa12.58□□□□□ -0.4
TMEM254-201ENST00000372273 NEFMP07197 916 aa12.58□□□□□ -0.4
TMEM254-201ENST00000372273 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
TMEM254-201ENST00000372273 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
TMEM254-201ENST00000372273 NFE2L2Q16236 605 aa12.58□□□□□ -0.4
TMEM254-201ENST00000372273 RTF1Q92541 710 aaKnown RBP12.57□□□□□ -0.4
TMEM254-201ENST00000372273 RUNDC1Q96C34 613 aa12.57□□□□□ -0.4
TMEM254-201ENST00000372273 CCNL1Q9UK58 526 aaPredicted RBP12.57□□□□□ -0.4
TMEM254-201ENST00000372273 NHSQ6T4R5 1651 aa12.56□□□□□ -0.4
TMEM254-201ENST00000372273 BTAF1O14981 1849 aa12.56□□□□□ -0.4
TMEM254-201ENST00000372273 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
TMEM254-201ENST00000372273 SIK1P57059 783 aa12.56□□□□□ -0.4
TMEM254-201ENST00000372273 TEFQ10587 303 aa12.56□□□□□ -0.4
TMEM254-201ENST00000372273 AMIGO3Q86WK7 504 aa12.56□□□□□ -0.4
TMEM254-201ENST00000372273 ITPK1Q13572 414 aa12.55□□□□□ -0.4
TMEM254-201ENST00000372273 ZNF827Q17R98 1081 aa12.55□□□□□ -0.4
TMEM254-201ENST00000372273 ATP6V1AP38606 617 aa12.55□□□□□ -0.4
TMEM254-201ENST00000372273 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
TMEM254-201ENST00000372273 CEMIPQ8WUJ3 1361 aa12.55□□□□□ -0.4
TMEM254-201ENST00000372273 PLEKHG2Q9H7P9 1386 aa12.55□□□□□ -0.4
TMEM254-201ENST00000372273 PNNQ9H307 717 aaKnown RBP12.54□□□□□ -0.4
TMEM254-201ENST00000372273 ZBED9Q6R2W3 1325 aa12.54□□□□□ -0.4
TMEM254-201ENST00000372273 PRAMEF22A3QJZ6 481 aa12.53□□□□□ -0.4
TMEM254-201ENST00000372273 BTBD11A6QL63 1104 aa12.53□□□□□ -0.4
TMEM254-201ENST00000372273 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
TMEM254-201ENST00000372273 ZNF496Q96IT1 587 aaPredicted RBP12.53□□□□□ -0.4
TMEM254-201ENST00000372273 ITGB4P16144 1822 aa12.53□□□□□ -0.4
TMEM254-201ENST00000372273 ZNF790Q6PG37 636 aa12.52□□□□□ -0.4
TMEM254-201ENST00000372273 LAS1LQ9Y4W2 734 aaKnown RBP12.52□□□□□ -0.4
TMEM254-201ENST00000372273 SLC15A2Q16348 729 aa12.51□□□□□ -0.41
TMEM254-201ENST00000372273 SLC27A3Q5K4L6 730 aa12.51□□□□□ -0.41
TMEM254-201ENST00000372273 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
TMEM254-201ENST00000372273 PHF14O94880 888 aa12.5□□□□□ -0.41
TMEM254-201ENST00000372273 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
TMEM254-201ENST00000372273 PIP4K2AP48426 406 aaPredicted RBP12.5□□□□□ -0.41
TMEM254-201ENST00000372273 TAF7Q15545 349 aaPredicted RBP12.5□□□□□ -0.41
TMEM254-201ENST00000372273 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
TMEM254-201ENST00000372273 NBPF14Q5TI25 921 aa12.5□□□□□ -0.41
TMEM254-201ENST00000372273 DNAJC10Q8IXB1 793 aa12.5□□□□□ -0.41
TMEM254-201ENST00000372273 TTC5Q8N0Z6 440 aa12.5□□□□□ -0.41
TMEM254-201ENST00000372273 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
TMEM254-201ENST00000372273 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
TMEM254-201ENST00000372273 SCN11AQ9UI33 1791 aa12.49□□□□□ -0.41
TMEM254-201ENST00000372273 MRC1P22897 1456 aa12.48□□□□□ -0.41
TMEM254-201ENST00000372273 STK32BQ9NY57 414 aa12.48□□□□□ -0.41
TMEM254-201ENST00000372273 MSH5O43196 834 aa12.47□□□□□ -0.41
TMEM254-201ENST00000372273 ZBTB7AO95365 584 aa12.47□□□□□ -0.41
TMEM254-201ENST00000372273 USP16Q9Y5T5 823 aa12.47□□□□□ -0.41
TMEM254-201ENST00000372273 GNPATO15228 680 aa12.47□□□□□ -0.41
TMEM254-201ENST00000372273 TSPYL4Q9UJ04 414 aa12.47□□□□□ -0.41
TMEM254-201ENST00000372273 NUP188Q5SRE5 1749 aa12.47□□□□□ -0.41
TMEM254-201ENST00000372273 ADAMTS7Q9UKP4 1686 aa12.46□□□□□ -0.41
TMEM254-201ENST00000372273 PNPLA7Q6ZV29 1317 aa12.46□□□□□ -0.41
TMEM254-201ENST00000372273 DLG5Q8TDM6 1919 aa12.46□□□□□ -0.41
TMEM254-201ENST00000372273 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.41
TMEM254-201ENST00000372273 WWC1Q8IX03 1113 aa12.46□□□□□ -0.41
TMEM254-201ENST00000372273 RREB1Q92766 1687 aa12.46□□□□□ -0.42
TMEM254-201ENST00000372273 COL23A1Q86Y22 540 aaPredicted RBP12.46□□□□□ -0.42
TMEM254-201ENST00000372273 AK7Q96M32 723 aa12.46□□□□□ -0.42
TMEM254-201ENST00000372273 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.42
TMEM254-201ENST00000372273 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.42
TMEM254-201ENST00000372273 KCPQ6ZWJ8 1503 aa12.45□□□□□ -0.42
TMEM254-201ENST00000372273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
TMEM254-201ENST00000372273 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
TMEM254-201ENST00000372273 A1BGP04217 495 aa12.45□□□□□ -0.42
TMEM254-201ENST00000372273 CYP19A1P11511 503 aaPredicted RBP12.45□□□□□ -0.42
TMEM254-201ENST00000372273 ERICH6BQ5W0A0 696 aa12.45□□□□□ -0.42
TMEM254-201ENST00000372273 INTS5Q6P9B9 1019 aaKnown RBP12.45□□□□□ -0.42
TMEM254-201ENST00000372273 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
TMEM254-201ENST00000372273 TSR2Q969E8 191 aaKnown RBP12.45□□□□□ -0.42
TMEM254-201ENST00000372273 FMNL2Q96PY5 1086 aa12.45□□□□□ -0.42
TMEM254-201ENST00000372273 ZNF330Q9Y3S2 320 aaPredicted RBP12.45□□□□□ -0.42
TMEM254-201ENST00000372273 LY75O60449 1722 aa12.44□□□□□ -0.42
TMEM254-201ENST00000372273 CANXP27824 592 aaKnown RBP12.44□□□□□ -0.42
TMEM254-201ENST00000372273 LMOD3Q0VAK6 560 aa12.44□□□□□ -0.42
TMEM254-201ENST00000372273 MSL1Q68DK7 614 aa12.44□□□□□ -0.42
TMEM254-201ENST00000372273 MBIPQ9NS73 344 aa12.44□□□□□ -0.42
TMEM254-201ENST00000372273 ZBTB1Q9Y2K1 713 aa12.44□□□□□ -0.42
TMEM254-201ENST00000372273 EIF4A1P60842 406 aaKnown RBP12.44□□□□□ -0.42
TMEM254-201ENST00000372273 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
TMEM254-201ENST00000372273 CHL1O00533 1208 aa12.43□□□□□ -0.42
TMEM254-201ENST00000372273 VIRMAQ69YN4 1812 aaKnown RBP12.43□□□□□ -0.42
TMEM254-201ENST00000372273 PAPPAQ13219 1627 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms