RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.48□□□□□ -0.09
TSPAN1-201ENST00000372003 RGPD1P0DJD0 1748 aa14.48□□□□□ -0.09
TSPAN1-201ENST00000372003 THSD7AQ9UPZ6 1657 aa14.48□□□□□ -0.09
TSPAN1-201ENST00000372003 CLUAP1Q96AJ1 413 aa14.48□□□□□ -0.09
TSPAN1-201ENST00000372003 TNS2Q63HR2 1409 aa14.48□□□□□ -0.09
TSPAN1-201ENST00000372003 PCDH11XQ9BZA7 1347 aa14.47□□□□□ -0.09
TSPAN1-201ENST00000372003 PCDH11YQ9BZA8 1340 aa14.47□□□□□ -0.09
TSPAN1-201ENST00000372003 PLEKHF1Q96S99 279 aa14.47□□□□□ -0.09
TSPAN1-201ENST00000372003 APAF1O14727 1248 aa14.46□□□□□ -0.09
TSPAN1-201ENST00000372003 PHKG2P15735 406 aa14.46□□□□□ -0.09
TSPAN1-201ENST00000372003 C1orf141Q5JVX7 400 aa14.46□□□□□ -0.09
TSPAN1-201ENST00000372003 IFNL2Q8IZJ0 200 aa14.46□□□□□ -0.09
TSPAN1-201ENST00000372003 ACSBG1Q96GR2 724 aa14.45□□□□□ -0.1
TSPAN1-201ENST00000372003 UPF2Q9HAU5 1272 aaKnown RBP14.45□□□□□ -0.1
TSPAN1-201ENST00000372003 LRRC37A3O60309 1634 aa14.45□□□□□ -0.1
TSPAN1-201ENST00000372003 IGHDP01880 384 aa14.44□□□□□ -0.1
TSPAN1-201ENST00000372003 FAM196AQ6ZSG2 479 aa14.44□□□□□ -0.1
TSPAN1-201ENST00000372003 GAS2L2Q8NHY3 880 aa14.44□□□□□ -0.1
TSPAN1-201ENST00000372003 RUNDC1Q96C34 613 aa14.44□□□□□ -0.1
TSPAN1-201ENST00000372003 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
TSPAN1-201ENST00000372003 MPRIPQ6WCQ1 1025 aa14.44□□□□□ -0.1
TSPAN1-201ENST00000372003 UBE2Q2Q8WVN8 375 aa14.44□□□□□ -0.1
TSPAN1-201ENST00000372003 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
TSPAN1-201ENST00000372003 PARP4Q9UKK3 1724 aaKnown RBP14.43□□□□□ -0.1
TSPAN1-201ENST00000372003 BCAR3O75815 825 aa14.43□□□□□ -0.1
TSPAN1-201ENST00000372003 AKAP4Q5JQC9 854 aa14.43□□□□□ -0.1
TSPAN1-201ENST00000372003 RRP7AQ9Y3A4 280 aaKnown RBP14.43□□□□□ -0.1
TSPAN1-201ENST00000372003 TRIM37O94972 964 aa14.42□□□□□ -0.1
TSPAN1-201ENST00000372003 ANTXR1Q9H6X2 564 aa14.42□□□□□ -0.1
TSPAN1-201ENST00000372003 SPINK5Q9NQ38 1064 aaPredicted RBP14.42□□□□□ -0.1
TSPAN1-201ENST00000372003 GNAT3A8MTJ3 354 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 KCNQ2O43526 872 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 WDR63Q8IWG1 891 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 WNK3Q9BYP7 1800 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 HSP90AB1P08238 724 aaKnown RBP14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 PRIM1P49642 420 aaKnown RBP14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 RIPK4P57078 832 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 NKX1-1Q15270 411 aaPredicted RBP14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 NFE2L2Q16236 605 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 CCDC27Q2M243 656 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 PTF1AQ7RTS3 328 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 WWC1Q8IX03 1113 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 TBC1D32Q96NH3 1257 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 PLEKHG2Q9H7P9 1386 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 LGR6Q9HBX8 967 aa14.41□□□□□ -0.1
TSPAN1-201ENST00000372003 BRWD3Q6RI45 1802 aa14.4□□□□□ -0.1
TSPAN1-201ENST00000372003 TMPOP42166 694 aaKnown RBP14.4□□□□□ -0.1
TSPAN1-201ENST00000372003 DCAF5Q96JK2 942 aa14.4□□□□□ -0.1
TSPAN1-201ENST00000372003 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
TSPAN1-201ENST00000372003 DCTN1Q14203 1278 aa14.39□□□□□ -0.11
TSPAN1-201ENST00000372003 RTF1Q92541 710 aaKnown RBP14.39□□□□□ -0.11
TSPAN1-201ENST00000372003 MAP3K5Q99683 1374 aa14.38□□□□□ -0.11
TSPAN1-201ENST00000372003 RNMTO43148 476 aaKnown RBP14.38□□□□□ -0.11
TSPAN1-201ENST00000372003 CT47B1P0C2W7 299 aaPredicted RBP14.38□□□□□ -0.11
TSPAN1-201ENST00000372003 CABP4P57796 275 aa14.38□□□□□ -0.11
TSPAN1-201ENST00000372003 MCM10Q7L590 875 aa14.38□□□□□ -0.11
TSPAN1-201ENST00000372003 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
TSPAN1-201ENST00000372003 IL17REQ8NFR9 667 aa14.37□□□□□ -0.11
TSPAN1-201ENST00000372003 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.37□□□□□ -0.11
TSPAN1-201ENST00000372003 ISY1Q9ULR0 285 aaKnown RBP14.37□□□□□ -0.11
TSPAN1-201ENST00000372003 PKD1L3Q7Z443 1732 aa14.37□□□□□ -0.11
TSPAN1-201ENST00000372003 RARSP54136 660 aaKnown RBP14.37□□□□□ -0.11
TSPAN1-201ENST00000372003 NFATC2IPQ8NCF5 419 aa14.37□□□□□ -0.11
TSPAN1-201ENST00000372003 BCL11BQ9C0K0 894 aaPredicted RBP14.37□□□□□ -0.11
TSPAN1-201ENST00000372003 KDM6AO15550 1401 aaPredicted RBP14.36□□□□□ -0.11
TSPAN1-201ENST00000372003 SF3B2Q13435 895 aaKnown RBP14.36□□□□□ -0.11
TSPAN1-201ENST00000372003 THUMPD2Q9BTF0 503 aaKnown RBP14.36□□□□□ -0.11
TSPAN1-201ENST00000372003 TMOD3Q9NYL9 352 aa14.36□□□□□ -0.11
TSPAN1-201ENST00000372003 COG6Q9Y2V7 657 aa14.36□□□□□ -0.11
TSPAN1-201ENST00000372003 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
TSPAN1-201ENST00000372003 ERVV-2B6SEH9 535 aa14.35□□□□□ -0.11
TSPAN1-201ENST00000372003 APBA3O96018 575 aa14.35□□□□□ -0.11
TSPAN1-201ENST00000372003 PIGBQ92521 554 aa14.35□□□□□ -0.11
TSPAN1-201ENST00000372003 UPF1Q92900 1129 aaKnown RBP eCLIP14.35□□□□□ -0.11
TSPAN1-201ENST00000372003 BCL9O00512 1426 aa14.35□□□□□ -0.11
TSPAN1-201ENST00000372003 FSD2A1L4K1 749 aa14.34□□□□□ -0.11
TSPAN1-201ENST00000372003 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
TSPAN1-201ENST00000372003 SEC24BO95487 1268 aa14.34□□□□□ -0.11
TSPAN1-201ENST00000372003 TEFQ10587 303 aa14.34□□□□□ -0.11
TSPAN1-201ENST00000372003 PANK1Q8TE04 598 aa14.33□□□□□ -0.11
TSPAN1-201ENST00000372003 SLC52A2Q9HAB3 445 aa14.33□□□□□ -0.11
TSPAN1-201ENST00000372003 TRIM35Q9UPQ4 493 aa14.33□□□□□ -0.11
TSPAN1-201ENST00000372003 LMOD3Q0VAK6 560 aa14.33□□□□□ -0.12
TSPAN1-201ENST00000372003 TBC1D2Q9BYX2 928 aa14.33□□□□□ -0.12
TSPAN1-201ENST00000372003 PDZRN3Q9UPQ7 1066 aa14.33□□□□□ -0.12
TSPAN1-201ENST00000372003 EP400Q96L91 3159 aa14.32□□□□□ -0.12
TSPAN1-201ENST00000372003 MYH16Q9H6N6 1097 aa14.32□□□□□ -0.12
TSPAN1-201ENST00000372003 CHMP5Q9NZZ3 219 aa14.32□□□□□ -0.12
TSPAN1-201ENST00000372003 GOLGA6L3A6NEY3 463 aa14.31□□□□□ -0.12
TSPAN1-201ENST00000372003 DEFB132Q7Z7B7 95 aa14.31□□□□□ -0.12
TSPAN1-201ENST00000372003 CCDC125Q86Z20 511 aa14.31□□□□□ -0.12
TSPAN1-201ENST00000372003 MIS18AQ9NYP9 233 aa14.31□□□□□ -0.12
TSPAN1-201ENST00000372003 ASAP1Q9ULH1 1129 aa14.31□□□□□ -0.12
TSPAN1-201ENST00000372003 MCM4P33991 863 aa14.3□□□□□ -0.12
TSPAN1-201ENST00000372003 EN1Q05925 392 aaPredicted RBP14.3□□□□□ -0.12
TSPAN1-201ENST00000372003 SLC39A6Q13433 755 aa14.3□□□□□ -0.12
TSPAN1-201ENST00000372003 PCDHB15Q9Y5E8 787 aa14.3□□□□□ -0.12
TSPAN1-201ENST00000372003 CEMIPQ8WUJ3 1361 aa14.3□□□□□ -0.12
TSPAN1-201ENST00000372003 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
TSPAN1-201ENST00000372003 MVPQ14764 893 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms