RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 SYTL4Q96C24 671 aaPredicted RBP17.08■□□□□ 0.33
TTC39A-204ENST00000371750 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.33
TTC39A-204ENST00000371750 IL16Q14005 1332 aa17.08■□□□□ 0.32
TTC39A-204ENST00000371750 UBR2Q8IWV8 1755 aa17.08■□□□□ 0.32
TTC39A-204ENST00000371750 PRIM1P49642 420 aaKnown RBP17.08■□□□□ 0.32
TTC39A-204ENST00000371750 GOLGA2Q08379 1002 aa17.08■□□□□ 0.32
TTC39A-204ENST00000371750 NFATC2IPQ8NCF5 419 aa17.08■□□□□ 0.32
TTC39A-204ENST00000371750 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
TTC39A-204ENST00000371750 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
TTC39A-204ENST00000371750 KCNQ2O43526 872 aa17.07■□□□□ 0.32
TTC39A-204ENST00000371750 IFT57Q9NWB7 429 aa17.07■□□□□ 0.32
TTC39A-204ENST00000371750 KAT6BQ8WYB5 2073 aa17.07■□□□□ 0.32
TTC39A-204ENST00000371750 TNS1Q9HBL0 1735 aaKnown RBP17.07■□□□□ 0.32
TTC39A-204ENST00000371750 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
TTC39A-204ENST00000371750 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
TTC39A-204ENST00000371750 ZNF853P0CG23 659 aa17.06■□□□□ 0.32
TTC39A-204ENST00000371750 PTF1AQ7RTS3 328 aa17.06■□□□□ 0.32
TTC39A-204ENST00000371750 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
TTC39A-204ENST00000371750 PIGBQ92521 554 aa17.05■□□□□ 0.32
TTC39A-204ENST00000371750 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
TTC39A-204ENST00000371750 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
TTC39A-204ENST00000371750 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
TTC39A-204ENST00000371750 KCPQ6ZWJ8 1503 aa17.05■□□□□ 0.32
TTC39A-204ENST00000371750 BTBD11A6QL63 1104 aa17.04■□□□□ 0.32
TTC39A-204ENST00000371750 GNAI1P63096 354 aa17.04■□□□□ 0.32
TTC39A-204ENST00000371750 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
TTC39A-204ENST00000371750 TSPYL4Q9UJ04 414 aa17.04■□□□□ 0.32
TTC39A-204ENST00000371750 CHL1O00533 1208 aa17.04■□□□□ 0.32
TTC39A-204ENST00000371750 SLFN5Q08AF3 891 aa17.04■□□□□ 0.32
TTC39A-204ENST00000371750 E9PSI1 815 aa17.03■□□□□ 0.32
TTC39A-204ENST00000371750 SLC39A6Q13433 755 aa17.03■□□□□ 0.32
TTC39A-204ENST00000371750 KCNQ3O43525 872 aa17.03■□□□□ 0.32
TTC39A-204ENST00000371750 C5P01031 1676 aa17.02■□□□□ 0.32
TTC39A-204ENST00000371750 TRIM37O94972 964 aa17.01■□□□□ 0.31
TTC39A-204ENST00000371750 MYH16Q9H6N6 1097 aa17.01■□□□□ 0.31
TTC39A-204ENST00000371750 BABAM1Q9NWV8 329 aa17.01■□□□□ 0.31
TTC39A-204ENST00000371750 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
TTC39A-204ENST00000371750 LY75O60449 1722 aa17■□□□□ 0.31
TTC39A-204ENST00000371750 DUSP27Q5VZP5 1158 aa17■□□□□ 0.31
TTC39A-204ENST00000371750 ZNF790Q6PG37 636 aa17■□□□□ 0.31
TTC39A-204ENST00000371750 ATG3Q9NT62 314 aa17■□□□□ 0.31
TTC39A-204ENST00000371750 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
TTC39A-204ENST00000371750 BCL11BQ9C0K0 894 aaPredicted RBP16.99■□□□□ 0.31
TTC39A-204ENST00000371750 LAMB4A4D0S4 1761 aa16.99■□□□□ 0.31
TTC39A-204ENST00000371750 TJP1Q07157 1748 aa16.99■□□□□ 0.31
TTC39A-204ENST00000371750 PALLDQ8WX93 1383 aa16.99■□□□□ 0.31
TTC39A-204ENST00000371750 KRT24Q2M2I5 525 aa16.99■□□□□ 0.31
TTC39A-204ENST00000371750 TTC5Q8N0Z6 440 aa16.99■□□□□ 0.31
TTC39A-204ENST00000371750 CICQ96RK0 1608 aaPredicted RBP16.98■□□□□ 0.31
TTC39A-204ENST00000371750 EIF4A1P60842 406 aaKnown RBP16.97■□□□□ 0.31
TTC39A-204ENST00000371750 ZNF496Q96IT1 587 aaPredicted RBP16.97■□□□□ 0.31
TTC39A-204ENST00000371750 EXOSC9Q06265 439 aaKnown RBP16.96■□□□□ 0.31
TTC39A-204ENST00000371750 RGPD3A6NKT7 1758 aaPredicted RBP16.96■□□□□ 0.31
TTC39A-204ENST00000371750 RGPD4Q7Z3J3 1758 aa16.96■□□□□ 0.31
TTC39A-204ENST00000371750 PTCD1O75127 700 aaKnown RBP16.96■□□□□ 0.3
TTC39A-204ENST00000371750 ZNF831Q5JPB2 1677 aa16.95■□□□□ 0.3
TTC39A-204ENST00000371750 C8orf58Q8NAV2 365 aa16.95■□□□□ 0.3
TTC39A-204ENST00000371750 HEG1Q9ULI3 1381 aa16.95■□□□□ 0.3
TTC39A-204ENST00000371750 TSPYL6Q8N831 410 aa16.94■□□□□ 0.3
TTC39A-204ENST00000371750 FMNL2Q96PY5 1086 aa16.94■□□□□ 0.3
TTC39A-204ENST00000371750 COL5A3P25940 1745 aaPredicted RBP16.94■□□□□ 0.3
TTC39A-204ENST00000371750 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
TTC39A-204ENST00000371750 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
TTC39A-204ENST00000371750 PRAMEF22A3QJZ6 481 aa16.93■□□□□ 0.3
TTC39A-204ENST00000371750 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
TTC39A-204ENST00000371750 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
TTC39A-204ENST00000371750 ILDR2Q71H61 639 aa16.92■□□□□ 0.3
TTC39A-204ENST00000371750 TAF1LQ8IZX4 1826 aa16.91■□□□□ 0.3
TTC39A-204ENST00000371750 LOC102724428A0A0B4J2F2 783 aa16.91■□□□□ 0.3
TTC39A-204ENST00000371750 APBA3O96018 575 aa16.91■□□□□ 0.3
TTC39A-204ENST00000371750 SIK1P57059 783 aa16.91■□□□□ 0.3
TTC39A-204ENST00000371750 TWISTNBQ3B726 338 aaPredicted RBP16.91■□□□□ 0.3
TTC39A-204ENST00000371750 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
TTC39A-204ENST00000371750 RREB1Q92766 1687 aa16.9■□□□□ 0.3
TTC39A-204ENST00000371750 KCNQ4P56696 695 aa16.89■□□□□ 0.29
TTC39A-204ENST00000371750 SNRPA1P09661 255 aaKnown RBP16.89■□□□□ 0.29
TTC39A-204ENST00000371750 DNAJC10Q8IXB1 793 aa16.89■□□□□ 0.29
TTC39A-204ENST00000371750 ATP6V1AP38606 617 aa16.88■□□□□ 0.29
TTC39A-204ENST00000371750 ITPK1Q13572 414 aa16.88■□□□□ 0.29
TTC39A-204ENST00000371750 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
TTC39A-204ENST00000371750 CCNL1Q9UK58 526 aaPredicted RBP16.88■□□□□ 0.29
TTC39A-204ENST00000371750 VAMP4O75379 141 aa16.87■□□□□ 0.29
TTC39A-204ENST00000371750 HOXB7P09629 217 aa16.87■□□□□ 0.29
TTC39A-204ENST00000371750 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
TTC39A-204ENST00000371750 USP16Q9Y5T5 823 aa16.87■□□□□ 0.29
TTC39A-204ENST00000371750 C4BP0C0L5 1744 aa16.87■□□□□ 0.29
TTC39A-204ENST00000371750 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
TTC39A-204ENST00000371750 PLSCR1O15162 318 aa16.86■□□□□ 0.29
TTC39A-204ENST00000371750 SF3B2Q13435 895 aaKnown RBP16.86■□□□□ 0.29
TTC39A-204ENST00000371750 HDGFL1Q5TGJ6 251 aa16.86■□□□□ 0.29
TTC39A-204ENST00000371750 SOS1Q07889 1333 aaPredicted RBP16.86■□□□□ 0.29
TTC39A-204ENST00000371750 EIF2S2P20042 333 aaKnown RBP16.86■□□□□ 0.29
TTC39A-204ENST00000371750 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
TTC39A-204ENST00000371750 CT47B1P0C2W7 299 aaPredicted RBP16.85■□□□□ 0.29
TTC39A-204ENST00000371750 TXNRD1Q16881 649 aa16.85■□□□□ 0.29
TTC39A-204ENST00000371750 LINC00116Q8NCU8 138 aa16.85■□□□□ 0.29
TTC39A-204ENST00000371750 LRRC4BQ9NT99 713 aa16.85■□□□□ 0.29
TTC39A-204ENST00000371750 EN1Q05925 392 aaPredicted RBP16.84■□□□□ 0.29
TTC39A-204ENST00000371750 DEFB132Q7Z7B7 95 aa16.84■□□□□ 0.29
TTC39A-204ENST00000371750 PROM2Q8N271 834 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms