RNA–Protein interactions for RNA: ENST00000371437.4

NDUFA1-201, Transcript of NADH:ubiquinone oxidoreductase subunit A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA1, Length 766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1-201ENST00000371437 KDRP35968 1356 aa25.36■■□□□ 1.65
NDUFA1-201ENST00000371437 SSFA2P28290 1259 aa25.36■■□□□ 1.65
NDUFA1-201ENST00000371437 MYH14Q7Z406 1995 aaKnown RBP25.36■■□□□ 1.65
NDUFA1-201ENST00000371437 BRCA1P38398 1863 aaKnown RBP25.35■■□□□ 1.65
NDUFA1-201ENST00000371437 TMOD3Q9NYL9 352 aa25.35■■□□□ 1.65
NDUFA1-201ENST00000371437 IGSF1Q8N6C5 1336 aa25.35■■□□□ 1.65
NDUFA1-201ENST00000371437 EIF4A2Q14240 407 aaKnown RBP25.34■■□□□ 1.65
NDUFA1-201ENST00000371437 IFNL2Q8IZJ0 200 aa25.34■■□□□ 1.65
NDUFA1-201ENST00000371437 PLEKHG2Q9H7P9 1386 aa25.33■■□□□ 1.65
NDUFA1-201ENST00000371437 ATG3Q9NT62 314 aa25.32■■□□□ 1.64
NDUFA1-201ENST00000371437 VIRMAQ69YN4 1812 aaKnown RBP25.3■■□□□ 1.64
NDUFA1-201ENST00000371437 GNPATO15228 680 aa25.3■■□□□ 1.64
NDUFA1-201ENST00000371437 ATP6V1AP38606 617 aa25.3■■□□□ 1.64
NDUFA1-201ENST00000371437 EIF4G2P78344 907 aaKnown RBP eCLIP25.3■■□□□ 1.64
NDUFA1-201ENST00000371437 WWC3Q9ULE0 1092 aa25.3■■□□□ 1.64
NDUFA1-201ENST00000371437 SLC4A9Q96Q91 983 aa25.29■■□□□ 1.64
NDUFA1-201ENST00000371437 TJP1Q07157 1748 aa25.28■■□□□ 1.64
NDUFA1-201ENST00000371437 KDM6AO15550 1401 aaPredicted RBP25.28■■□□□ 1.64
NDUFA1-201ENST00000371437 PXDNLA1KZ92 1463 aa25.28■■□□□ 1.64
NDUFA1-201ENST00000371437 SCN11AQ9UI33 1791 aa25.27■■□□□ 1.64
NDUFA1-201ENST00000371437 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
NDUFA1-201ENST00000371437 HSPA5P11021 654 aaKnown RBP25.25■■□□□ 1.63
NDUFA1-201ENST00000371437 ARFGEF1Q9Y6D6 1849 aa25.24■■□□□ 1.63
NDUFA1-201ENST00000371437 GPBP1L1Q9HC44 474 aaPredicted RBP25.24■■□□□ 1.63
NDUFA1-201ENST00000371437 C10orf71Q711Q0 1435 aa25.23■■□□□ 1.63
NDUFA1-201ENST00000371437 POLR3GLQ9BT43 218 aa25.23■■□□□ 1.63
NDUFA1-201ENST00000371437 ADAMTS7Q9UKP4 1686 aa25.23■■□□□ 1.63
NDUFA1-201ENST00000371437 MMP10P09238 476 aa25.22■■□□□ 1.63
NDUFA1-201ENST00000371437 ERVV-2B6SEH9 535 aa25.21■■□□□ 1.63
NDUFA1-201ENST00000371437 ZNF526Q8TF50 670 aaPredicted RBP25.21■■□□□ 1.63
NDUFA1-201ENST00000371437 CNTNAP4Q9C0A0 1308 aa25.19■■□□□ 1.62
NDUFA1-201ENST00000371437 DCAF5Q96JK2 942 aa25.19■■□□□ 1.62
NDUFA1-201ENST00000371437 CEP350Q5VT06 3117 aa25.19■■□□□ 1.62
NDUFA1-201ENST00000371437 PANK3Q9H999 370 aa25.18■■□□□ 1.62
NDUFA1-201ENST00000371437 RTCBQ9Y3I0 505 aaKnown RBP25.18■■□□□ 1.62
NDUFA1-201ENST00000371437 TRAPPC3LQ5T215 181 aa25.17■■□□□ 1.62
NDUFA1-201ENST00000371437 RC3H1Q5TC82 1133 aaKnown RBP25.17■■□□□ 1.62
NDUFA1-201ENST00000371437 ARHGEF1Q92888 912 aaKnown RBP25.17■■□□□ 1.62
NDUFA1-201ENST00000371437 RBM42Q9BTD8 480 aaKnown RBP25.17■■□□□ 1.62
NDUFA1-201ENST00000371437 HSP90AB1P08238 724 aaKnown RBP25.16■■□□□ 1.62
NDUFA1-201ENST00000371437 AEBP1Q8IUX7 1158 aa25.16■■□□□ 1.62
NDUFA1-201ENST00000371437 KIF3CO14782 793 aa25.15■■□□□ 1.62
NDUFA1-201ENST00000371437 GYS1P13807 737 aa25.15■■□□□ 1.62
NDUFA1-201ENST00000371437 PLEKHO1Q53GL0 409 aaPredicted RBP25.15■■□□□ 1.62
NDUFA1-201ENST00000371437 ZNF530Q6P9A1 599 aaPredicted RBP25.15■■□□□ 1.62
NDUFA1-201ENST00000371437 ADRA2BP18089 450 aa25.14■■□□□ 1.62
NDUFA1-201ENST00000371437 RPS6KA4O75676 772 aa25.13■■□□□ 1.61
NDUFA1-201ENST00000371437 HSPA6P17066 643 aa25.13■■□□□ 1.61
NDUFA1-201ENST00000371437 TGFB2P61812 414 aa25.13■■□□□ 1.61
NDUFA1-201ENST00000371437 NLGN1Q8N2Q7 840 aa25.13■■□□□ 1.61
NDUFA1-201ENST00000371437 AMOTQ4VCS5 1084 aa25.12■■□□□ 1.61
NDUFA1-201ENST00000371437 SBF1O95248 1867 aa25.12■■□□□ 1.61
NDUFA1-201ENST00000371437 A0A0G2JLW4 131 aa25.11■■□□□ 1.61
NDUFA1-201ENST00000371437 CABP4P57796 275 aa25.11■■□□□ 1.61
NDUFA1-201ENST00000371437 AFDNP55196 1824 aaKnown RBP25.11■■□□□ 1.61
NDUFA1-201ENST00000371437 BCS1LQ9Y276 419 aa25.09■■□□□ 1.61
NDUFA1-201ENST00000371437 DPEP1P16444 411 aa25.08■■□□□ 1.61
NDUFA1-201ENST00000371437 MTHFSP49914 203 aa25.08■■□□□ 1.61
NDUFA1-201ENST00000371437 CCDC87Q9NVE4 849 aa25.08■■□□□ 1.61
NDUFA1-201ENST00000371437 MRC1P22897 1456 aa25.08■■□□□ 1.6
NDUFA1-201ENST00000371437 ZNF316A6NFI3 1004 aaPredicted RBP25.07■■□□□ 1.6
NDUFA1-201ENST00000371437 RFC4P35249 363 aa25.07■■□□□ 1.6
NDUFA1-201ENST00000371437 UBR2Q8IWV8 1755 aa25.06■■□□□ 1.6
NDUFA1-201ENST00000371437 DLEC1Q9Y238 1755 aa25.06■■□□□ 1.6
NDUFA1-201ENST00000371437 PTCD1O75127 700 aaKnown RBP25.06■■□□□ 1.6
NDUFA1-201ENST00000371437 KCNA3P22001 575 aa25.06■■□□□ 1.6
NDUFA1-201ENST00000371437 IL13P35225 146 aa25.06■■□□□ 1.6
NDUFA1-201ENST00000371437 CRKLP46109 303 aaKnown RBP25.06■■□□□ 1.6
NDUFA1-201ENST00000371437 SULT6B1Q6IMI4 303 aa25.06■■□□□ 1.6
NDUFA1-201ENST00000371437 MORC1Q86VD1 984 aa25.06■■□□□ 1.6
NDUFA1-201ENST00000371437 NFATC2IPQ8NCF5 419 aa25.06■■□□□ 1.6
NDUFA1-201ENST00000371437 NRXN2Q9P2S2 1712 aa25.06■■□□□ 1.6
NDUFA1-201ENST00000371437 SRP68Q9UHB9 627 aaKnown RBP25.05■■□□□ 1.6
NDUFA1-201ENST00000371437 PARP3Q9Y6F1 533 aa25.05■■□□□ 1.6
NDUFA1-201ENST00000371437 C1orf141Q5JVX7 400 aa25.04■■□□□ 1.6
NDUFA1-201ENST00000371437 IFFO2Q5TF58 517 aa25.04■■□□□ 1.6
NDUFA1-201ENST00000371437 USP42Q9H9J4 1324 aaKnown RBP25.04■■□□□ 1.6
NDUFA1-201ENST00000371437 KCPQ6ZWJ8 1503 aa25.03■■□□□ 1.6
NDUFA1-201ENST00000371437 DDR1Q08345 913 aa25.03■■□□□ 1.6
NDUFA1-201ENST00000371437 FKBP8Q14318 412 aa25.02■■□□□ 1.6
NDUFA1-201ENST00000371437 WDR90Q96KV7 1748 aa25.02■■□□□ 1.6
NDUFA1-201ENST00000371437 FCHSD2O94868 740 aa25.01■■□□□ 1.59
NDUFA1-201ENST00000371437 INTS5Q6P9B9 1019 aaKnown RBP25.01■■□□□ 1.59
NDUFA1-201ENST00000371437 AMER1Q5JTC6 1135 aaPredicted RBP25■■□□□ 1.59
NDUFA1-201ENST00000371437 ARHGAP27Q6ZUM4 889 aa25■■□□□ 1.59
NDUFA1-201ENST00000371437 CCDC88AQ3V6T2 1871 aa25■■□□□ 1.59
NDUFA1-201ENST00000371437 NMRK2Q9NPI5 230 aa24.98■■□□□ 1.59
NDUFA1-201ENST00000371437 SIPA1L3O60292 1781 aaPredicted RBP24.98■■□□□ 1.59
NDUFA1-201ENST00000371437 TNRC6CQ9HCJ0 1690 aaKnown RBP24.97■■□□□ 1.59
NDUFA1-201ENST00000371437 AKAP4Q5JQC9 854 aa24.97■■□□□ 1.59
NDUFA1-201ENST00000371437 DNAJC10Q8IXB1 793 aa24.97■■□□□ 1.59
NDUFA1-201ENST00000371437 SLC52A2Q9HAB3 445 aa24.96■■□□□ 1.59
NDUFA1-201ENST00000371437 LGR6Q9HBX8 967 aa24.96■■□□□ 1.59
NDUFA1-201ENST00000371437 KNSTRNQ9Y448 316 aa24.96■■□□□ 1.59
NDUFA1-201ENST00000371437 SOS1Q07889 1333 aaPredicted RBP24.95■■□□□ 1.58
NDUFA1-201ENST00000371437 POLRMTO00411 1230 aaKnown RBP24.95■■□□□ 1.58
NDUFA1-201ENST00000371437 TM4SF1P30408 202 aa24.95■■□□□ 1.58
NDUFA1-201ENST00000371437 PIM2Q9P1W9 311 aa24.95■■□□□ 1.58
NDUFA1-201ENST00000371437 KIF7Q2M1P5 1343 aa24.94■■□□□ 1.58
NDUFA1-201ENST00000371437 TOMM70O94826 608 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms