RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 OVOS2A0A0J9YW53 1432 aa21.4■■□□□ 1.02
CHUK-201ENST00000370397 OVOS2Q6IE36 1432 aa21.4■■□□□ 1.02
CHUK-201ENST00000370397 SSH2Q76I76 1423 aa21.4■■□□□ 1.02
CHUK-201ENST00000370397 NCKAP5LQ9HCH0 1330 aa21.4■■□□□ 1.02
CHUK-201ENST00000370397 TRHP20396 242 aaPredicted RBP21.4■■□□□ 1.02
CHUK-201ENST00000370397 CSPP1Q1MSJ5 1256 aa21.4■■□□□ 1.02
CHUK-201ENST00000370397 IL25Q9H293 177 aa21.4■■□□□ 1.02
CHUK-201ENST00000370397 TECPR2O15040 1411 aa21.4■■□□□ 1.02
CHUK-201ENST00000370397 WASLO00401 505 aaPredicted RBP21.4■■□□□ 1.02
CHUK-201ENST00000370397 NEK4P51957 841 aa21.4■■□□□ 1.02
CHUK-201ENST00000370397 CASC1Q6TDU7 716 aa21.4■■□□□ 1.02
CHUK-201ENST00000370397 PLEKHG5O94827 1062 aa21.39■■□□□ 1.01
CHUK-201ENST00000370397 EIF4A2Q14240 407 aaKnown RBP21.39■■□□□ 1.01
CHUK-201ENST00000370397 SASS6Q6UVJ0 657 aa21.39■■□□□ 1.01
CHUK-201ENST00000370397 FAM13BQ9NYF5 915 aa21.39■■□□□ 1.01
CHUK-201ENST00000370397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.39■■□□□ 1.01
CHUK-201ENST00000370397 GADD45BO75293 160 aaPredicted RBP21.38■■□□□ 1.01
CHUK-201ENST00000370397 ANAPC15P60006 121 aa21.38■■□□□ 1.01
CHUK-201ENST00000370397 TSHZ3Q63HK5 1081 aa21.37■■□□□ 1.01
CHUK-201ENST00000370397 G2E3Q7L622 706 aa21.37■■□□□ 1.01
CHUK-201ENST00000370397 TMEM87AQ8NBN3 555 aa21.37■■□□□ 1.01
CHUK-201ENST00000370397 MCM10Q7L590 875 aa21.37■■□□□ 1.01
CHUK-201ENST00000370397 APBB1O00213 710 aa21.37■■□□□ 1.01
CHUK-201ENST00000370397 MCM2P49736 904 aa21.37■■□□□ 1.01
CHUK-201ENST00000370397 ARHGEF10O15013 1369 aa21.37■■□□□ 1.01
CHUK-201ENST00000370397 METP08581 1390 aa21.37■■□□□ 1.01
CHUK-201ENST00000370397 RNF214Q8ND24 703 aa21.36■■□□□ 1.01
CHUK-201ENST00000370397 CHMLP26374 656 aa21.36■■□□□ 1.01
CHUK-201ENST00000370397 FOXD4L5Q5VV16 416 aaPredicted RBP21.35■■□□□ 1.01
CHUK-201ENST00000370397 FOXD4L4Q8WXT5 416 aaPredicted RBP21.35■■□□□ 1.01
CHUK-201ENST00000370397 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.35■■□□□ 1.01
CHUK-201ENST00000370397 TSPY26PQ9H489 355 aa21.35■■□□□ 1.01
CHUK-201ENST00000370397 STAP2Q9UGK3 403 aa21.35■■□□□ 1.01
CHUK-201ENST00000370397 PRR36Q9H6K5 1346 aa21.34■■□□□ 1.01
CHUK-201ENST00000370397 UNC5CLQ8IV45 518 aa21.34■■□□□ 1.01
CHUK-201ENST00000370397 ZNF710Q8N1W2 664 aa21.34■■□□□ 1.01
CHUK-201ENST00000370397 GTF2F1P35269 517 aaKnown RBP eCLIP21.34■■□□□ 1.01
CHUK-201ENST00000370397 JARID2Q92833 1246 aaPredicted RBP21.33■■□□□ 1
CHUK-201ENST00000370397 COG3Q96JB2 828 aa21.33■■□□□ 1
CHUK-201ENST00000370397 SLC4A2P04920 1241 aa21.32■■□□□ 1
CHUK-201ENST00000370397 SULT6B1Q6IMI4 303 aa21.32■■□□□ 1
CHUK-201ENST00000370397 MYRIPQ8NFW9 859 aa21.32■■□□□ 1
CHUK-201ENST00000370397 NUDT16Q96DE0 195 aaKnown RBP21.32■■□□□ 1
CHUK-201ENST00000370397 F6X3S4 739 aa21.31■■□□□ 1
CHUK-201ENST00000370397 USP48Q86UV5 1035 aa21.31■■□□□ 1
CHUK-201ENST00000370397 PNMA6EA0A0J9YXQ4 647 aa21.31■■□□□ 1
CHUK-201ENST00000370397 EXOC6BQ9Y2D4 811 aa21.31■■□□□ 1
CHUK-201ENST00000370397 FUCA2Q9BTY2 467 aa21.31■■□□□ 1
CHUK-201ENST00000370397 PIBF1Q8WXW3 757 aa21.3■■□□□ 1
CHUK-201ENST00000370397 GDPD2Q9HCC8 539 aa21.3■■□□□ 1
CHUK-201ENST00000370397 USP31Q70CQ4 1352 aa21.3■■□□□ 1
CHUK-201ENST00000370397 HAP1P54257 671 aaPredicted RBP21.3■■□□□ 1
CHUK-201ENST00000370397 SPTLC3Q9NUV7 552 aa21.3■■□□□ 1
CHUK-201ENST00000370397 MX1P20591 662 aa21.29■■□□□ 1
CHUK-201ENST00000370397 MTERF4Q7Z6M4 381 aaKnown RBP21.29■■□□□ 1
CHUK-201ENST00000370397 MARF1Q9Y4F3 1742 aaKnown RBP21.29■■□□□ 1
CHUK-201ENST00000370397 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.29■■□□□ 1
CHUK-201ENST00000370397 HMMRO75330 724 aa21.28■■□□□ 1
CHUK-201ENST00000370397 KIAA2012Q0VF49 1180 aa21.28■■□□□ 1
CHUK-201ENST00000370397 TTC14Q96N46 770 aa21.28■■□□□ 1
CHUK-201ENST00000370397 CEP170BQ9Y4F5 1589 aaPredicted RBP21.28■■□□□ 1
CHUK-201ENST00000370397 EPB41L2O43491 1005 aaKnown RBP21.28■■□□□ 1
CHUK-201ENST00000370397 HSPA4P34932 840 aa21.28■■□□□ 1
CHUK-201ENST00000370397 CCT4P50991 539 aaKnown RBP21.28■■□□□ 1
CHUK-201ENST00000370397 UVSSAQ2YD98 709 aa21.28■■□□□ 1
CHUK-201ENST00000370397 SMAP1Q8IYB5 467 aaPredicted RBP21.28■■□□□ 1
CHUK-201ENST00000370397 SRCIN1Q9C0H9 1055 aa21.28■■□□□ 1
CHUK-201ENST00000370397 PXDNLA1KZ92 1463 aa21.28■■□□□ 1
CHUK-201ENST00000370397 KDRP35968 1356 aa21.28■■□□□ 1
CHUK-201ENST00000370397 CHD2O14647 1828 aaKnown RBP21.28■■□□□ 1
CHUK-201ENST00000370397 CCDC61Q9Y6R9 512 aa21.27■■□□□ 1
CHUK-201ENST00000370397 MIS18AQ9NYP9 233 aa21.27■□□□□ 0.99
CHUK-201ENST00000370397 AP5Z1O43299 807 aa21.26■□□□□ 0.99
CHUK-201ENST00000370397 LRRCC1Q9C099 1032 aa21.26■□□□□ 0.99
CHUK-201ENST00000370397 AOX1Q06278 1338 aa21.25■□□□□ 0.99
CHUK-201ENST00000370397 UPF3BQ9BZI7 483 aaKnown RBP21.25■□□□□ 0.99
CHUK-201ENST00000370397 GNAI2P04899 355 aa21.25■□□□□ 0.99
CHUK-201ENST00000370397 SIRT1Q96EB6 747 aa21.25■□□□□ 0.99
CHUK-201ENST00000370397 FOXO3O43524 673 aa21.25■□□□□ 0.99
CHUK-201ENST00000370397 ATP8B2P98198 1209 aa21.25■□□□□ 0.99
CHUK-201ENST00000370397 FAM184AQ8NB25 1140 aa21.25■□□□□ 0.99
CHUK-201ENST00000370397 NWD1Q149M9 1564 aa21.25■□□□□ 0.99
CHUK-201ENST00000370397 ZNF830Q96NB3 372 aaPredicted RBP21.24■□□□□ 0.99
CHUK-201ENST00000370397 MAP3K19Q56UN5 1328 aa21.24■□□□□ 0.99
CHUK-201ENST00000370397 FKBP5Q13451 457 aaPredicted RBP21.24■□□□□ 0.99
CHUK-201ENST00000370397 HSP90AB2PQ58FF8 381 aa21.24■□□□□ 0.99
CHUK-201ENST00000370397 CCDC94Q9BW85 323 aaPredicted RBP21.24■□□□□ 0.99
CHUK-201ENST00000370397 HMGN5P82970 282 aaKnown RBP21.23■□□□□ 0.99
CHUK-201ENST00000370397 WDR33Q9C0J8 1336 aaKnown RBP21.23■□□□□ 0.99
CHUK-201ENST00000370397 NOLC1Q14978 699 aaKnown RBP eCLIP21.23■□□□□ 0.99
CHUK-201ENST00000370397 USP25Q9UHP3 1055 aa21.23■□□□□ 0.99
CHUK-201ENST00000370397 SYAP1Q96A49 352 aaPredicted RBP21.22■□□□□ 0.99
CHUK-201ENST00000370397 PRIMPOLQ96LW4 560 aa21.22■□□□□ 0.99
CHUK-201ENST00000370397 ANO2Q9NQ90 1003 aa21.22■□□□□ 0.99
CHUK-201ENST00000370397 TSC1Q92574 1164 aa21.22■□□□□ 0.99
CHUK-201ENST00000370397 C17orf53Q8N3J3 647 aaPredicted RBP21.22■□□□□ 0.99
CHUK-201ENST00000370397 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
CHUK-201ENST00000370397 TTC21BQ7Z4L5 1316 aa21.21■□□□□ 0.99
CHUK-201ENST00000370397 USP6P35125 1406 aa21.21■□□□□ 0.99
CHUK-201ENST00000370397 MTHFSDQ2M296 383 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms