RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 PPP1R1BQ9UD71 204 aaPredicted RBP19.45■□□□□ 0.7
SSR4-203ENST00000370086 NFATC2IPQ8NCF5 419 aa19.44■□□□□ 0.7
SSR4-203ENST00000370086 SGIP1Q9BQI5 828 aa19.44■□□□□ 0.7
SSR4-203ENST00000370086 LGR6Q9HBX8 967 aa19.44■□□□□ 0.7
SSR4-203ENST00000370086 ITPK1Q13572 414 aa19.43■□□□□ 0.7
SSR4-203ENST00000370086 COL23A1Q86Y22 540 aaPredicted RBP19.43■□□□□ 0.7
SSR4-203ENST00000370086 LINC00116Q8NCU8 138 aa19.43■□□□□ 0.7
SSR4-203ENST00000370086 COL5A3P25940 1745 aaPredicted RBP19.42■□□□□ 0.7
SSR4-203ENST00000370086 ATP6V1AP38606 617 aa19.42■□□□□ 0.7
SSR4-203ENST00000370086 SLC16A10Q8TF71 515 aa19.42■□□□□ 0.7
SSR4-203ENST00000370086 SLC4A9Q96Q91 983 aa19.42■□□□□ 0.7
SSR4-203ENST00000370086 RSPH6AQ9H0K4 717 aa19.42■□□□□ 0.7
SSR4-203ENST00000370086 MRC1P22897 1456 aa19.41■□□□□ 0.7
SSR4-203ENST00000370086 RNMTO43148 476 aaKnown RBP19.41■□□□□ 0.7
SSR4-203ENST00000370086 AMIGO3Q86WK7 504 aa19.41■□□□□ 0.7
SSR4-203ENST00000370086 NUDCQ9Y266 331 aa19.41■□□□□ 0.7
SSR4-203ENST00000370086 HMGB2P26583 209 aaKnown RBP19.4■□□□□ 0.7
SSR4-203ENST00000370086 SMIM5Q71RC9 77 aa19.4■□□□□ 0.7
SSR4-203ENST00000370086 RBM42Q9BTD8 480 aaKnown RBP19.4■□□□□ 0.7
SSR4-203ENST00000370086 SLC52A2Q9HAB3 445 aa19.4■□□□□ 0.7
SSR4-203ENST00000370086 U2AF1L5P0DN76 240 aaPredicted RBP19.39■□□□□ 0.69
SSR4-203ENST00000370086 PRKAR2BP31323 418 aa19.39■□□□□ 0.69
SSR4-203ENST00000370086 ZEB1P37275 1124 aaPredicted RBP19.39■□□□□ 0.69
SSR4-203ENST00000370086 U2AF1Q01081 240 aaKnown RBP eCLIP19.39■□□□□ 0.69
SSR4-203ENST00000370086 PHACTR3Q96KR7 559 aa19.39■□□□□ 0.69
SSR4-203ENST00000370086 AK7Q96M32 723 aa19.39■□□□□ 0.69
SSR4-203ENST00000370086 TJP1Q07157 1748 aa19.39■□□□□ 0.69
SSR4-203ENST00000370086 MSH5O43196 834 aa19.38■□□□□ 0.69
SSR4-203ENST00000370086 SIPA1L3O60292 1781 aaPredicted RBP19.38■□□□□ 0.69
SSR4-203ENST00000370086 MYH14Q7Z406 1995 aaKnown RBP19.38■□□□□ 0.69
SSR4-203ENST00000370086 MAP3K5Q99683 1374 aa19.37■□□□□ 0.69
SSR4-203ENST00000370086 GAS2L2Q8NHY3 880 aa19.37■□□□□ 0.69
SSR4-203ENST00000370086 CICQ96RK0 1608 aaPredicted RBP19.36■□□□□ 0.69
SSR4-203ENST00000370086 PTCD1O75127 700 aaKnown RBP19.36■□□□□ 0.69
SSR4-203ENST00000370086 ARXQ96QS3 562 aa19.36■□□□□ 0.69
SSR4-203ENST00000370086 UBR2Q8IWV8 1755 aa19.35■□□□□ 0.69
SSR4-203ENST00000370086 GNAT3A8MTJ3 354 aa19.35■□□□□ 0.69
SSR4-203ENST00000370086 FCHSD2O94868 740 aa19.35■□□□□ 0.69
SSR4-203ENST00000370086 PHF14O94880 888 aa19.35■□□□□ 0.69
SSR4-203ENST00000370086 FLAD1Q8NFF5 587 aa19.35■□□□□ 0.69
SSR4-203ENST00000370086 IL17REQ8NFR9 667 aa19.35■□□□□ 0.69
SSR4-203ENST00000370086 RALBP1Q15311 655 aa19.34■□□□□ 0.69
SSR4-203ENST00000370086 FHDC1Q9C0D6 1143 aaPredicted RBP19.34■□□□□ 0.69
SSR4-203ENST00000370086 DLG5Q8TDM6 1919 aa19.33■□□□□ 0.69
SSR4-203ENST00000370086 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.33■□□□□ 0.68
SSR4-203ENST00000370086 GNPATO15228 680 aa19.33■□□□□ 0.68
SSR4-203ENST00000370086 SSFA2P28290 1259 aa19.33■□□□□ 0.68
SSR4-203ENST00000370086 SLC39A6Q13433 755 aa19.33■□□□□ 0.68
SSR4-203ENST00000370086 MSL1Q68DK7 614 aa19.33■□□□□ 0.68
SSR4-203ENST00000370086 KCPQ6ZWJ8 1503 aa19.33■□□□□ 0.68
SSR4-203ENST00000370086 POLD1P28340 1107 aa19.32■□□□□ 0.68
SSR4-203ENST00000370086 RC3H1Q5TC82 1133 aaKnown RBP19.31■□□□□ 0.68
SSR4-203ENST00000370086 SYT17Q9BSW7 474 aa19.31■□□□□ 0.68
SSR4-203ENST00000370086 C4AP0C0L4 1744 aa19.31■□□□□ 0.68
SSR4-203ENST00000370086 CNTNAP4Q9C0A0 1308 aa19.3■□□□□ 0.68
SSR4-203ENST00000370086 CEMIPQ8WUJ3 1361 aa19.3■□□□□ 0.68
SSR4-203ENST00000370086 CRKLP46109 303 aaKnown RBP19.28■□□□□ 0.68
SSR4-203ENST00000370086 TEFQ10587 303 aa19.28■□□□□ 0.68
SSR4-203ENST00000370086 PLEKHF1Q96S99 279 aa19.28■□□□□ 0.68
SSR4-203ENST00000370086 RTCBQ9Y3I0 505 aaKnown RBP19.28■□□□□ 0.68
SSR4-203ENST00000370086 MYBBP1AQ9BQG0 1328 aaKnown RBP19.27■□□□□ 0.68
SSR4-203ENST00000370086 RPS6KA4O75676 772 aa19.27■□□□□ 0.68
SSR4-203ENST00000370086 DNAJC10Q8IXB1 793 aa19.27■□□□□ 0.68
SSR4-203ENST00000370086 TRAPPC3LQ5T215 181 aa19.26■□□□□ 0.67
SSR4-203ENST00000370086 ARHGEF1Q92888 912 aaKnown RBP19.26■□□□□ 0.67
SSR4-203ENST00000370086 INTS5Q6P9B9 1019 aaKnown RBP19.25■□□□□ 0.67
SSR4-203ENST00000370086 MCM10Q7L590 875 aa19.25■□□□□ 0.67
SSR4-203ENST00000370086 KLHL34Q8N239 644 aa19.25■□□□□ 0.67
SSR4-203ENST00000370086 DCTN1Q14203 1278 aa19.24■□□□□ 0.67
SSR4-203ENST00000370086 ZNF790Q6PG37 636 aa19.24■□□□□ 0.67
SSR4-203ENST00000370086 RTF1Q92541 710 aaKnown RBP19.24■□□□□ 0.67
SSR4-203ENST00000370086 CYP19A1P11511 503 aaPredicted RBP19.23■□□□□ 0.67
SSR4-203ENST00000370086 ADRA2BP18089 450 aa19.23■□□□□ 0.67
SSR4-203ENST00000370086 TTC5Q8N0Z6 440 aa19.23■□□□□ 0.67
SSR4-203ENST00000370086 VSIG10Q8N0Z9 540 aa19.23■□□□□ 0.67
SSR4-203ENST00000370086 PRKRIP1Q9H875 184 aaPredicted RBP19.23■□□□□ 0.67
SSR4-203ENST00000370086 KCNQ3O43525 872 aa19.22■□□□□ 0.67
SSR4-203ENST00000370086 HTATSF1O43719 755 aaKnown RBP19.22■□□□□ 0.67
SSR4-203ENST00000370086 ZNF496Q96IT1 587 aaPredicted RBP19.22■□□□□ 0.67
SSR4-203ENST00000370086 BTBD11A6QL63 1104 aa19.21■□□□□ 0.67
SSR4-203ENST00000370086 NLGN2Q8NFZ4 835 aa19.21■□□□□ 0.67
SSR4-203ENST00000370086 CCDC87Q9NVE4 849 aa19.21■□□□□ 0.67
SSR4-203ENST00000370086 HEG1Q9ULI3 1381 aa19.2■□□□□ 0.66
SSR4-203ENST00000370086 NEFMP07197 916 aa19.2■□□□□ 0.66
SSR4-203ENST00000370086 RFC4P35249 363 aa19.2■□□□□ 0.66
SSR4-203ENST00000370086 DCAF8L1A6NGE4 600 aa19.19■□□□□ 0.66
SSR4-203ENST00000370086 GYS1P13807 737 aa19.19■□□□□ 0.66
SSR4-203ENST00000370086 NFE2L2Q16236 605 aa19.19■□□□□ 0.66
SSR4-203ENST00000370086 PNNQ9H307 717 aaKnown RBP19.19■□□□□ 0.66
SSR4-203ENST00000370086 ZNF316A6NFI3 1004 aaPredicted RBP19.18■□□□□ 0.66
SSR4-203ENST00000370086 SRP68Q9UHB9 627 aaKnown RBP19.18■□□□□ 0.66
SSR4-203ENST00000370086 ZBTB1Q9Y2K1 713 aa19.18■□□□□ 0.66
SSR4-203ENST00000370086 UTRNP46939 3433 aa19.18■□□□□ 0.66
SSR4-203ENST00000370086 SOS1Q07889 1333 aaPredicted RBP19.18■□□□□ 0.66
SSR4-203ENST00000370086 KDM3BQ7LBC6 1761 aa19.17■□□□□ 0.66
SSR4-203ENST00000370086 KIF13BQ9NQT8 1826 aa19.17■□□□□ 0.66
SSR4-203ENST00000370086 MMP10P09238 476 aa19.17■□□□□ 0.66
SSR4-203ENST00000370086 NLGN1Q8N2Q7 840 aa19.17■□□□□ 0.66
SSR4-203ENST00000370086 FMNL2Q96PY5 1086 aa19.17■□□□□ 0.66
SSR4-203ENST00000370086 MAPK8IP3Q9UPT6 1336 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms