RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 CNGB1Q14028 1251 aaPredicted RBP6.56□□□□□ -1.36
UBE3D-202ENST00000369746 TCP11L2Q8N4U5 519 aa6.56□□□□□ -1.36
UBE3D-202ENST00000369746 YTHDC2Q9H6S0 1430 aaKnown RBP6.56□□□□□ -1.36
UBE3D-202ENST00000369746 TNS2Q63HR2 1409 aa6.56□□□□□ -1.36
UBE3D-202ENST00000369746 TOMM70O94826 608 aa6.56□□□□□ -1.36
UBE3D-202ENST00000369746 SUGT1Q9Y2Z0 365 aa6.56□□□□□ -1.36
UBE3D-202ENST00000369746 PEX14O75381 377 aa6.56□□□□□ -1.36
UBE3D-202ENST00000369746 POLD1P28340 1107 aa6.56□□□□□ -1.36
UBE3D-202ENST00000369746 HSP90AA2PQ14568 343 aaPredicted RBP6.56□□□□□ -1.36
UBE3D-202ENST00000369746 SPATA32Q96LK8 384 aa6.56□□□□□ -1.36
UBE3D-202ENST00000369746 PHF14O94880 888 aa6.55□□□□□ -1.36
UBE3D-202ENST00000369746 FOXD4Q12950 439 aaPredicted RBP6.55□□□□□ -1.36
UBE3D-202ENST00000369746 MYH16Q9H6N6 1097 aa6.55□□□□□ -1.36
UBE3D-202ENST00000369746 PKD1L3Q7Z443 1732 aa6.55□□□□□ -1.36
UBE3D-202ENST00000369746 COL5A2P05997 1499 aaPredicted RBP6.55□□□□□ -1.36
UBE3D-202ENST00000369746 RIOK3O14730 519 aaKnown RBP6.55□□□□□ -1.36
UBE3D-202ENST00000369746 TERF2IPQ9NYB0 399 aa6.55□□□□□ -1.36
UBE3D-202ENST00000369746 SPATA31E1Q6ZUB1 1445 aa6.54□□□□□ -1.36
UBE3D-202ENST00000369746 PDE3BQ13370 1112 aa6.54□□□□□ -1.36
UBE3D-202ENST00000369746 ESCO1Q5FWF5 840 aa6.54□□□□□ -1.36
UBE3D-202ENST00000369746 NME8Q8N427 588 aa6.54□□□□□ -1.36
UBE3D-202ENST00000369746 ARFGEF1Q9Y6D6 1849 aa6.54□□□□□ -1.36
UBE3D-202ENST00000369746 ANKRD13AQ8IZ07 590 aa6.54□□□□□ -1.36
UBE3D-202ENST00000369746 HS6ST3Q8IZP7 471 aa6.54□□□□□ -1.36
UBE3D-202ENST00000369746 CLGNO14967 610 aa6.53□□□□□ -1.36
UBE3D-202ENST00000369746 RBM26Q5T8P6 1007 aaKnown RBP6.53□□□□□ -1.36
UBE3D-202ENST00000369746 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
UBE3D-202ENST00000369746 TNS4Q8IZW8 715 aa6.53□□□□□ -1.36
UBE3D-202ENST00000369746 FHDC1Q9C0D6 1143 aaPredicted RBP6.53□□□□□ -1.36
UBE3D-202ENST00000369746 PRDM4Q9UKN5 801 aa6.53□□□□□ -1.36
UBE3D-202ENST00000369746 RRP7BPQ9NSQ0 103 aa6.52□□□□□ -1.37
UBE3D-202ENST00000369746 ANKRD62A6NC57 917 aa6.52□□□□□ -1.37
UBE3D-202ENST00000369746 FAM98CQ17RN3 349 aaKnown RBP6.52□□□□□ -1.37
UBE3D-202ENST00000369746 ZNF622Q969S3 477 aaKnown RBP eCLIP6.52□□□□□ -1.37
UBE3D-202ENST00000369746 NSD2O96028 1365 aa6.52□□□□□ -1.37
UBE3D-202ENST00000369746 TESPA1A2RU30 521 aaPredicted RBP6.51□□□□□ -1.37
UBE3D-202ENST00000369746 RINLQ6ZS11 566 aa6.51□□□□□ -1.37
UBE3D-202ENST00000369746 IGSF5Q9NSI5 407 aa6.51□□□□□ -1.37
UBE3D-202ENST00000369746 BTG4Q9NY30 223 aa6.51□□□□□ -1.37
UBE3D-202ENST00000369746 RPS6KL1Q9Y6S9 549 aa6.51□□□□□ -1.37
UBE3D-202ENST00000369746 ADGRB1O14514 1584 aa6.51□□□□□ -1.37
UBE3D-202ENST00000369746 KIAA1551Q9HCM1 1747 aa6.51□□□□□ -1.37
UBE3D-202ENST00000369746 KIF3CO14782 793 aa6.51□□□□□ -1.37
UBE3D-202ENST00000369746 MYCNP04198 464 aaPredicted RBP6.51□□□□□ -1.37
UBE3D-202ENST00000369746 MPNDQ8N594 471 aa6.51□□□□□ -1.37
UBE3D-202ENST00000369746 RGPD8O14715 1765 aaPredicted RBP6.51□□□□□ -1.37
UBE3D-202ENST00000369746 TUBGCP6Q96RT7 1819 aa6.5□□□□□ -1.37
UBE3D-202ENST00000369746 RAB11FIP3O75154 756 aa6.5□□□□□ -1.37
UBE3D-202ENST00000369746 AKT1S1Q96B36 256 aa6.5□□□□□ -1.37
UBE3D-202ENST00000369746 SH3BP1Q9Y3L3 701 aa6.5□□□□□ -1.37
UBE3D-202ENST00000369746 NUP155O75694 1391 aa6.5□□□□□ -1.37
UBE3D-202ENST00000369746 TRAK2O60296 914 aa6.5□□□□□ -1.37
UBE3D-202ENST00000369746 TRIM37O94972 964 aa6.5□□□□□ -1.37
UBE3D-202ENST00000369746 GORABQ5T7V8 394 aa6.5□□□□□ -1.37
UBE3D-202ENST00000369746 ZNF830Q96NB3 372 aaPredicted RBP6.5□□□□□ -1.37
UBE3D-202ENST00000369746 HDAC5Q9UQL6 1122 aa6.5□□□□□ -1.37
UBE3D-202ENST00000369746 VIRMAQ69YN4 1812 aaKnown RBP6.5□□□□□ -1.37
UBE3D-202ENST00000369746 MAP4K4O95819 1239 aaPredicted RBP6.49□□□□□ -1.37
UBE3D-202ENST00000369746 HSP90AA1P07900 732 aaKnown RBP6.49□□□□□ -1.37
UBE3D-202ENST00000369746 GCC1Q96CN9 775 aa6.49□□□□□ -1.37
UBE3D-202ENST00000369746 BTAF1O14981 1849 aa6.49□□□□□ -1.37
UBE3D-202ENST00000369746 PLEKHG3A1L390 1219 aa6.49□□□□□ -1.37
UBE3D-202ENST00000369746 RALBP1Q15311 655 aa6.49□□□□□ -1.37
UBE3D-202ENST00000369746 KCNV2Q8TDN2 545 aa6.49□□□□□ -1.37
UBE3D-202ENST00000369746 VTI1AQ96AJ9 217 aa6.49□□□□□ -1.37
UBE3D-202ENST00000369746 SMG6Q86US8 1419 aaKnown RBP6.49□□□□□ -1.37
UBE3D-202ENST00000369746 IPO9Q96P70 1041 aaKnown RBP6.48□□□□□ -1.37
UBE3D-202ENST00000369746 PDCL3Q9H2J4 239 aa6.48□□□□□ -1.37
UBE3D-202ENST00000369746 C14orf93Q9H972 538 aaKnown RBP6.48□□□□□ -1.37
UBE3D-202ENST00000369746 KDM6AO15550 1401 aaPredicted RBP6.48□□□□□ -1.37
UBE3D-202ENST00000369746 FAM117AQ9C073 453 aa6.48□□□□□ -1.37
UBE3D-202ENST00000369746 CARNS1A5YM72 827 aa6.48□□□□□ -1.37
UBE3D-202ENST00000369746 CCER2I3L3R5 266 aa6.48□□□□□ -1.37
UBE3D-202ENST00000369746 FOXO3O43524 673 aa6.48□□□□□ -1.37
UBE3D-202ENST00000369746 GPR162Q16538 588 aa6.48□□□□□ -1.37
UBE3D-202ENST00000369746 PPFIA4O75335 1185 aa6.47□□□□□ -1.37
UBE3D-202ENST00000369746 NKX1-1Q15270 411 aaPredicted RBP6.47□□□□□ -1.37
UBE3D-202ENST00000369746 TXNRD1Q16881 649 aa6.47□□□□□ -1.37
UBE3D-202ENST00000369746 ARMCX6Q7L4S7 300 aa6.47□□□□□ -1.37
UBE3D-202ENST00000369746 PNMA2Q9UL42 364 aa6.47□□□□□ -1.37
UBE3D-202ENST00000369746 INSRP06213 1382 aa6.47□□□□□ -1.37
UBE3D-202ENST00000369746 GIMAP6Q6P9H5 292 aa6.47□□□□□ -1.37
UBE3D-202ENST00000369746 HIRIP3Q9BW71 556 aaPredicted RBP6.47□□□□□ -1.37
UBE3D-202ENST00000369746 CARD10Q9BWT7 1032 aa6.47□□□□□ -1.37
UBE3D-202ENST00000369746 BRCA1P38398 1863 aaKnown RBP6.46□□□□□ -1.37
UBE3D-202ENST00000369746 APPP05067 770 aa6.46□□□□□ -1.38
UBE3D-202ENST00000369746 ANP32BQ92688 251 aaKnown RBP6.46□□□□□ -1.38
UBE3D-202ENST00000369746 KLHL42Q9P2K6 505 aa6.46□□□□□ -1.38
UBE3D-202ENST00000369746 C5P01031 1676 aa6.46□□□□□ -1.38
UBE3D-202ENST00000369746 PAX3P23760 479 aa6.46□□□□□ -1.38
UBE3D-202ENST00000369746 DDX17Q92841 729 aaKnown RBP6.46□□□□□ -1.38
UBE3D-202ENST00000369746 MAP7D2Q96T17 732 aa6.46□□□□□ -1.38
UBE3D-202ENST00000369746 PRDM11Q9NQV5 511 aa6.46□□□□□ -1.38
UBE3D-202ENST00000369746 WWC3Q9ULE0 1092 aa6.46□□□□□ -1.38
UBE3D-202ENST00000369746 MMP14P50281 582 aa6.45□□□□□ -1.38
UBE3D-202ENST00000369746 TSHZ1Q6ZSZ6 1077 aa6.45□□□□□ -1.38
UBE3D-202ENST00000369746 SMC1BQ8NDV3 1235 aa6.45□□□□□ -1.38
UBE3D-202ENST00000369746 KIAA1522Q9P206 1035 aaPredicted RBP6.45□□□□□ -1.38
UBE3D-202ENST00000369746 GSE1Q14687 1217 aa6.45□□□□□ -1.38
UBE3D-202ENST00000369746 UTP14CQ5TAP6 766 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms