RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 ST18O60284 1047 aa19.43■□□□□ 0.7
SYNCRIP-202ENST00000369622 PRPF40AO75400 957 aaKnown RBP19.42■□□□□ 0.7
SYNCRIP-202ENST00000369622 U2AF2P26368 475 aaKnown RBP eCLIP19.42■□□□□ 0.79e-7■■■□□ 16.7
SYNCRIP-202ENST00000369622 FOXD4L6Q3SYB3 417 aaPredicted RBP19.42■□□□□ 0.7
SYNCRIP-202ENST00000369622 FOXD4L3Q6VB84 417 aaPredicted RBP19.42■□□□□ 0.7
SYNCRIP-202ENST00000369622 PRR36Q9H6K5 1346 aa19.42■□□□□ 0.7
SYNCRIP-202ENST00000369622 CHL1O00533 1208 aa19.41■□□□□ 0.7
SYNCRIP-202ENST00000369622 HAP1P54257 671 aaPredicted RBP19.41■□□□□ 0.7
SYNCRIP-202ENST00000369622 TPRNQ4KMQ1 711 aa19.41■□□□□ 0.7
SYNCRIP-202ENST00000369622 ANKRD26Q9UPS8 1709 aa19.41■□□□□ 0.7
SYNCRIP-202ENST00000369622 PTMSP20962 102 aa19.41■□□□□ 0.7
SYNCRIP-202ENST00000369622 KIF20BQ96Q89 1820 aa19.41■□□□□ 0.7
SYNCRIP-202ENST00000369622 AK9Q5TCS8 1911 aa19.41■□□□□ 0.7
SYNCRIP-202ENST00000369622 ZSCAN23Q3MJ62 389 aa19.41■□□□□ 0.7
SYNCRIP-202ENST00000369622 CPSF1Q10570 1443 aaKnown RBP19.4■□□□□ 0.7
SYNCRIP-202ENST00000369622 RILPL2Q969X0 211 aa19.4■□□□□ 0.7
SYNCRIP-202ENST00000369622 ZBTB9Q96C00 473 aa19.4■□□□□ 0.7
SYNCRIP-202ENST00000369622 CPS1P31327 1500 aa19.4■□□□□ 0.7
SYNCRIP-202ENST00000369622 ACEP12821 1306 aa19.4■□□□□ 0.7
SYNCRIP-202ENST00000369622 TRIM6-TRIM34B2RNG4 842 aa19.4■□□□□ 0.7
SYNCRIP-202ENST00000369622 KCNJ4P48050 445 aa19.4■□□□□ 0.7
SYNCRIP-202ENST00000369622 NUCB2P80303 420 aa19.4■□□□□ 0.7
SYNCRIP-202ENST00000369622 HMMRO75330 724 aa19.39■□□□□ 0.69
SYNCRIP-202ENST00000369622 NEK4P51957 841 aa19.39■□□□□ 0.69
SYNCRIP-202ENST00000369622 A2ML1A8K2U0 1454 aa19.39■□□□□ 0.69
SYNCRIP-202ENST00000369622 REC8O95072 547 aa19.39■□□□□ 0.69
SYNCRIP-202ENST00000369622 KLHL40Q2TBA0 621 aa19.38■□□□□ 0.69
SYNCRIP-202ENST00000369622 TTC21BQ7Z4L5 1316 aa19.38■□□□□ 0.69
SYNCRIP-202ENST00000369622 CDK12Q9NYV4 1490 aaPredicted RBP19.38■□□□□ 0.69
SYNCRIP-202ENST00000369622 RTL1A6NKG5 1358 aa19.38■□□□□ 0.69
SYNCRIP-202ENST00000369622 AATKQ6ZMQ8 1374 aa19.38■□□□□ 0.69
SYNCRIP-202ENST00000369622 TRERF1Q96PN7 1200 aa19.38■□□□□ 0.69
SYNCRIP-202ENST00000369622 NUTM2GQ5VZR2 741 aa19.37■□□□□ 0.69
SYNCRIP-202ENST00000369622 SLC26A8Q96RN1 970 aa19.37■□□□□ 0.69
SYNCRIP-202ENST00000369622 ERC2O15083 957 aa19.37■□□□□ 0.69
SYNCRIP-202ENST00000369622 FKBP5Q13451 457 aaPredicted RBP19.37■□□□□ 0.69
SYNCRIP-202ENST00000369622 MYRIPQ8NFW9 859 aa19.37■□□□□ 0.69
SYNCRIP-202ENST00000369622 MTHFSDQ2M296 383 aaKnown RBP19.36■□□□□ 0.69
SYNCRIP-202ENST00000369622 CLTCQ00610 1675 aaKnown RBP19.36■□□□□ 0.69
SYNCRIP-202ENST00000369622 LTV1Q96GA3 475 aaPredicted RBP19.36■□□□□ 0.69
SYNCRIP-202ENST00000369622 STK31Q9BXU1 1019 aa19.36■□□□□ 0.69
SYNCRIP-202ENST00000369622 AMPHP49418 695 aa19.35■□□□□ 0.69
SYNCRIP-202ENST00000369622 CDC42BPGQ6DT37 1551 aa19.35■□□□□ 0.69
SYNCRIP-202ENST00000369622 PDE1AP54750 535 aa19.35■□□□□ 0.69
SYNCRIP-202ENST00000369622 SYCE3A1L190 88 aa19.35■□□□□ 0.69
SYNCRIP-202ENST00000369622 HDGFP51858 240 aaKnown RBP19.35■□□□□ 0.69
SYNCRIP-202ENST00000369622 ANO2Q9NQ90 1003 aa19.35■□□□□ 0.69
SYNCRIP-202ENST00000369622 PTPRCP08575 1304 aa19.34■□□□□ 0.69
SYNCRIP-202ENST00000369622 RICTORQ6R327 1708 aa19.34■□□□□ 0.69
SYNCRIP-202ENST00000369622 ATP10DQ9P241 1426 aa19.34■□□□□ 0.69
SYNCRIP-202ENST00000369622 PDCL2Q8N4E4 241 aa19.34■□□□□ 0.69
SYNCRIP-202ENST00000369622 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.34■□□□□ 0.693e-9■■■□□ 16.3
SYNCRIP-202ENST00000369622 PDLIM2Q96JY6 352 aa19.33■□□□□ 0.69
SYNCRIP-202ENST00000369622 LMBRD1Q9NUN5 540 aa19.33■□□□□ 0.69
SYNCRIP-202ENST00000369622 IRX5P78411 483 aaPredicted RBP19.33■□□□□ 0.68
SYNCRIP-202ENST00000369622 KIAA2012Q0VF49 1180 aa19.33■□□□□ 0.68
SYNCRIP-202ENST00000369622 ZFP91Q96JP5 570 aaPredicted RBP19.33■□□□□ 0.68
SYNCRIP-202ENST00000369622 HS1BP3Q53T59 392 aa19.33■□□□□ 0.68
SYNCRIP-202ENST00000369622 NGDNQ8NEJ9 315 aaKnown RBP19.33■□□□□ 0.68
SYNCRIP-202ENST00000369622 BCL2L12Q9HB09 334 aa19.33■□□□□ 0.68
SYNCRIP-202ENST00000369622 MAP3K19Q56UN5 1328 aa19.32■□□□□ 0.68
SYNCRIP-202ENST00000369622 GNAI2P04899 355 aa19.32■□□□□ 0.68
SYNCRIP-202ENST00000369622 CCDC39Q9UFE4 941 aa19.32■□□□□ 0.68
SYNCRIP-202ENST00000369622 UPF3BQ9BZI7 483 aaKnown RBP19.31■□□□□ 0.68
SYNCRIP-202ENST00000369622 IL1RAPL2Q9NP60 686 aa19.31■□□□□ 0.68
SYNCRIP-202ENST00000369622 C14orf37Q86TY3 774 aa19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 CWC22Q9HCG8 908 aaKnown RBP19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 PNMA6EA0A0J9YXQ4 647 aa19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 MAP4K4O95819 1239 aaPredicted RBP19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 KIF3AQ9Y496 699 aa19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 KIF24Q5T7B8 1368 aa19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 DLG5Q8TDM6 1919 aa19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 CCT4P50991 539 aaKnown RBP19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 LRRCC1Q9C099 1032 aa19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 TTC12Q9H892 705 aaPredicted RBP19.3■□□□□ 0.68
SYNCRIP-202ENST00000369622 RGS12O14924 1447 aa19.29■□□□□ 0.68
SYNCRIP-202ENST00000369622 ROBO2Q9HCK4 1378 aa19.29■□□□□ 0.68
SYNCRIP-202ENST00000369622 TMX3Q96JJ7 454 aa19.29■□□□□ 0.68
SYNCRIP-202ENST00000369622 ZDHHC9Q9Y397 364 aa19.29■□□□□ 0.68
SYNCRIP-202ENST00000369622 KNDC1Q76NI1 1749 aa19.29■□□□□ 0.68
SYNCRIP-202ENST00000369622 ZNF445P59923 1031 aa19.28■□□□□ 0.68
SYNCRIP-202ENST00000369622 GPT2Q8TD30 523 aa19.28■□□□□ 0.68
SYNCRIP-202ENST00000369622 PALD1Q9ULE6 856 aa19.28■□□□□ 0.68
SYNCRIP-202ENST00000369622 NSFL1CQ9UNZ2 370 aaKnown RBP19.28■□□□□ 0.68
SYNCRIP-202ENST00000369622 ERICH4A6NGS2 130 aa19.27■□□□□ 0.68
SYNCRIP-202ENST00000369622 FLIIQ13045 1269 aa19.27■□□□□ 0.68
SYNCRIP-202ENST00000369622 MX1P20591 662 aa19.27■□□□□ 0.68
SYNCRIP-202ENST00000369622 EYA1Q99502 592 aa19.27■□□□□ 0.68
SYNCRIP-202ENST00000369622 LRRFIP2Q9Y608 721 aaKnown RBP19.27■□□□□ 0.68
SYNCRIP-202ENST00000369622 MCCP23508 829 aa19.26■□□□□ 0.67
SYNCRIP-202ENST00000369622 CLEC17AQ6ZS10 378 aa19.26■□□□□ 0.67
SYNCRIP-202ENST00000369622 DLC1Q96QB1 1528 aa19.26■□□□□ 0.67
SYNCRIP-202ENST00000369622 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
SYNCRIP-202ENST00000369622 KIAA0232Q92628 1395 aa19.26■□□□□ 0.67
SYNCRIP-202ENST00000369622 CYP2E1P05181 493 aaPredicted RBP19.26■□□□□ 0.67
SYNCRIP-202ENST00000369622 NUTM1Q86Y26 1132 aa19.26■□□□□ 0.67
SYNCRIP-202ENST00000369622 CHMP4CQ96CF2 233 aa19.26■□□□□ 0.67
SYNCRIP-202ENST00000369622 GDPD2Q9HCC8 539 aa19.26■□□□□ 0.67
SYNCRIP-202ENST00000369622 EIF2S2P20042 333 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms