RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 RGS12O14924 1447 aa14.89□□□□□ -0.03
PHGDH-201ENST00000369407 ARHGEF40Q8TER5 1519 aa14.88□□□□□ -0.03
PHGDH-201ENST00000369407 SPDYE4A6NLX3 237 aa14.88□□□□□ -0.03
PHGDH-201ENST00000369407 NPM1P06748 294 aaKnown RBP eCLIP14.88□□□□□ -0.03
PHGDH-201ENST00000369407 PAXIP1Q6ZW49 1069 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-201ENST00000369407 SMAP1Q8IYB5 467 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-201ENST00000369407 SYAP1Q96A49 352 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-201ENST00000369407 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
PHGDH-201ENST00000369407 GTF2E1P29083 439 aaPredicted RBP14.87□□□□□ -0.03
PHGDH-201ENST00000369407 SRCIN1Q9C0H9 1055 aa14.87□□□□□ -0.03
PHGDH-201ENST00000369407 CUL4AQ13619 759 aa14.87□□□□□ -0.03
PHGDH-201ENST00000369407 SPC24Q8NBT2 197 aa14.87□□□□□ -0.03
PHGDH-201ENST00000369407 POGZQ7Z3K3 1410 aa14.87□□□□□ -0.03
PHGDH-201ENST00000369407 FIBPO43427 364 aa14.87□□□□□ -0.03
PHGDH-201ENST00000369407 IL1RAPL2Q9NP60 686 aa14.87□□□□□ -0.03
PHGDH-201ENST00000369407 ASXL2Q76L83 1435 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 MCCP23508 829 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 ATP2B3Q16720 1220 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 PPP4R3BQ5MIZ7 849 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 GIMAP6Q6P9H5 292 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 MTERF4Q7Z6M4 381 aaKnown RBP14.86□□□□□ -0.03
PHGDH-201ENST00000369407 PIBF1Q8WXW3 757 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 SIGLEC1Q9BZZ2 1709 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 PNMA6EA0A0J9YXQ4 647 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 FOXO3O43524 673 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 HMMRO75330 724 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 CHMLP26374 656 aa14.86□□□□□ -0.03
PHGDH-201ENST00000369407 CPA1P15085 419 aa14.85□□□□□ -0.03
PHGDH-201ENST00000369407 FRMPD1Q5SYB0 1578 aa14.85□□□□□ -0.03
PHGDH-201ENST00000369407 MX1P20591 662 aa14.85□□□□□ -0.03
PHGDH-201ENST00000369407 COG3Q96JB2 828 aa14.85□□□□□ -0.03
PHGDH-201ENST00000369407 CHMP3Q9Y3E7 222 aa14.85□□□□□ -0.03
PHGDH-201ENST00000369407 REREQ9P2R6 1566 aa14.84□□□□□ -0.03
PHGDH-201ENST00000369407 MAP2P11137 1827 aaKnown RBP14.84□□□□□ -0.03
PHGDH-201ENST00000369407 NUTM2FA1L443 756 aa14.84□□□□□ -0.03
PHGDH-201ENST00000369407 AP5Z1O43299 807 aa14.84□□□□□ -0.03
PHGDH-201ENST00000369407 ZSCAN20P17040 1043 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-201ENST00000369407 NUTM1Q86Y26 1132 aa14.84□□□□□ -0.03
PHGDH-201ENST00000369407 CHL1O00533 1208 aa14.83□□□□□ -0.03
PHGDH-201ENST00000369407 PHF14O94880 888 aa14.83□□□□□ -0.03
PHGDH-201ENST00000369407 LRRCC1Q9C099 1032 aa14.83□□□□□ -0.03
PHGDH-201ENST00000369407 YEATS2Q9ULM3 1422 aa14.83□□□□□ -0.04
PHGDH-201ENST00000369407 KIF24Q5T7B8 1368 aa14.83□□□□□ -0.04
PHGDH-201ENST00000369407 MCM2P49736 904 aa14.83□□□□□ -0.04
PHGDH-201ENST00000369407 DDX54Q8TDD1 881 aaKnown RBP14.83□□□□□ -0.04
PHGDH-201ENST00000369407 PYCARDQ9ULZ3 195 aa14.83□□□□□ -0.04
PHGDH-201ENST00000369407 ZBTB22O15209 634 aa14.83□□□□□ -0.04
PHGDH-201ENST00000369407 BCL2L12Q9HB09 334 aa14.83□□□□□ -0.04
PHGDH-201ENST00000369407 WDR33Q9C0J8 1336 aaKnown RBP14.82□□□□□ -0.04
PHGDH-201ENST00000369407 OSBPL3Q9H4L5 887 aa14.82□□□□□ -0.04
PHGDH-201ENST00000369407 KIF3AQ9Y496 699 aa14.82□□□□□ -0.04
PHGDH-201ENST00000369407 EIF4A2Q14240 407 aaKnown RBP14.82□□□□□ -0.04
PHGDH-201ENST00000369407 CCDC183Q5T5S1 534 aa14.82□□□□□ -0.04
PHGDH-201ENST00000369407 ANKRD26Q9UPS8 1709 aa14.82□□□□□ -0.04
PHGDH-201ENST00000369407 GNAI2P04899 355 aa14.81□□□□□ -0.04
PHGDH-201ENST00000369407 CDC42BPGQ6DT37 1551 aa14.81□□□□□ -0.04
PHGDH-201ENST00000369407 INTS4Q96HW7 963 aaKnown RBP14.81□□□□□ -0.04
PHGDH-201ENST00000369407 RPAP1Q9BWH6 1393 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-201ENST00000369407 PTPRCP08575 1304 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 DMTNQ08495 405 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 TXNDC2Q86VQ3 553 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 PRIMPOLQ96LW4 560 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 TCHHQ07283 1943 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 DLG5Q8TDM6 1919 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 KDM4AO75164 1064 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 CDK11BP21127 795 aaKnown RBP14.8□□□□□ -0.04
PHGDH-201ENST00000369407 HSP90AB2PQ58FF8 381 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 KCNF1Q9H3M0 494 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 SLC52A1Q9NWF4 448 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 TSPYL4Q9UJ04 414 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 HECW2Q9P2P5 1572 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 PIK3C2BO00750 1634 aa14.8□□□□□ -0.04
PHGDH-201ENST00000369407 RIOK3O14730 519 aaKnown RBP14.79□□□□□ -0.04
PHGDH-201ENST00000369407 U2AF2P26368 475 aaKnown RBP eCLIP14.79□□□□□ -0.044e-10■■□□□ 11.5
PHGDH-201ENST00000369407 SYT1P21579 422 aa14.79□□□□□ -0.04
PHGDH-201ENST00000369407 FKBP5Q13451 457 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-201ENST00000369407 LRRFIP2Q9Y608 721 aaKnown RBP14.79□□□□□ -0.04
PHGDH-201ENST00000369407 LARGE1O95461 756 aa14.79□□□□□ -0.04
PHGDH-201ENST00000369407 HMGN5P82970 282 aaKnown RBP14.79□□□□□ -0.04
PHGDH-201ENST00000369407 DNM1Q05193 864 aaKnown RBP14.79□□□□□ -0.04
PHGDH-201ENST00000369407 RASEFQ8IZ41 740 aa14.79□□□□□ -0.04
PHGDH-201ENST00000369407 KIF20BQ96Q89 1820 aa14.79□□□□□ -0.04
PHGDH-201ENST00000369407 SALL3Q9BXA9 1300 aa14.78□□□□□ -0.04
PHGDH-201ENST00000369407 ZSCAN22P10073 491 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-201ENST00000369407 AK2P54819 239 aa14.78□□□□□ -0.04
PHGDH-201ENST00000369407 FAM184AQ8NB25 1140 aa14.78□□□□□ -0.04
PHGDH-201ENST00000369407 SPG7Q9UQ90 795 aa14.78□□□□□ -0.04
PHGDH-201ENST00000369407 STX6O43752 255 aa14.77□□□□□ -0.04
PHGDH-201ENST00000369407 UVSSAQ2YD98 709 aa14.77□□□□□ -0.04
PHGDH-201ENST00000369407 NUDT16Q96DE0 195 aaKnown RBP14.77□□□□□ -0.04
PHGDH-201ENST00000369407 CAMK4Q16566 473 aa14.77□□□□□ -0.05
PHGDH-201ENST00000369407 PDCL2Q8N4E4 241 aa14.77□□□□□ -0.05
PHGDH-201ENST00000369407 ANAPC15P60006 121 aa14.77□□□□□ -0.05
PHGDH-201ENST00000369407 CCDC83Q8IWF9 413 aa14.77□□□□□ -0.05
PHGDH-201ENST00000369407 MYO5BQ9ULV0 1848 aa14.76□□□□□ -0.05
PHGDH-201ENST00000369407 CCT4P50991 539 aaKnown RBP14.76□□□□□ -0.05
PHGDH-201ENST00000369407 FAM173BQ6P4H8 233 aa14.76□□□□□ -0.05
PHGDH-201ENST00000369407 RUFY3Q7L099 469 aa14.76□□□□□ -0.05
PHGDH-201ENST00000369407 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
PHGDH-201ENST00000369407 CHMP4AQ9BY43 222 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms