RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 RPAP2Q8IXW5 612 aaPredicted RBP15.72■□□□□ 0.11
CHD1L-202ENST00000369258 PDCL3Q9H2J4 239 aa15.72■□□□□ 0.11
CHD1L-202ENST00000369258 LRRFIP2Q9Y608 721 aaKnown RBP15.72■□□□□ 0.11
CHD1L-202ENST00000369258 HS1BP3Q53T59 392 aa15.72■□□□□ 0.11
CHD1L-202ENST00000369258 KIF24Q5T7B8 1368 aa15.72■□□□□ 0.11
CHD1L-202ENST00000369258 TMEM131LA2VDJ0 1609 aa15.72■□□□□ 0.11
CHD1L-202ENST00000369258 ACEP12821 1306 aa15.72■□□□□ 0.11
CHD1L-202ENST00000369258 DIP2CQ9Y2E4 1556 aa15.72■□□□□ 0.11
CHD1L-202ENST00000369258 CHMP3Q9Y3E7 222 aa15.72■□□□□ 0.11
CHD1L-202ENST00000369258 EIF2S2P20042 333 aaKnown RBP15.71■□□□□ 0.11
CHD1L-202ENST00000369258 FAM69CQ0P6D2 419 aa15.71■□□□□ 0.11
CHD1L-202ENST00000369258 COL9A3Q14050 684 aaPredicted RBP15.71■□□□□ 0.11
CHD1L-202ENST00000369258 PHAXQ9H814 394 aaKnown RBP15.71■□□□□ 0.11
CHD1L-202ENST00000369258 ARHGAP31Q2M1Z3 1444 aa15.71■□□□□ 0.1
CHD1L-202ENST00000369258 KIF20BQ96Q89 1820 aa15.7■□□□□ 0.1
CHD1L-202ENST00000369258 NOL7Q9UMY1 257 aaKnown RBP15.7■□□□□ 0.1
CHD1L-202ENST00000369258 TCHHQ07283 1943 aa15.7■□□□□ 0.1
CHD1L-202ENST00000369258 SPG7Q9UQ90 795 aa15.69■□□□□ 0.1
CHD1L-202ENST00000369258 RIMS1Q86UR5 1692 aaKnown RBP15.69■□□□□ 0.1
CHD1L-202ENST00000369258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.69■□□□□ 0.1
CHD1L-202ENST00000369258 HAP1P54257 671 aaPredicted RBP15.69■□□□□ 0.1
CHD1L-202ENST00000369258 C14orf37Q86TY3 774 aa15.69■□□□□ 0.1
CHD1L-202ENST00000369258 RTF1Q92541 710 aaKnown RBP15.69■□□□□ 0.1
CHD1L-202ENST00000369258 PDLIM2Q96JY6 352 aa15.69■□□□□ 0.1
CHD1L-202ENST00000369258 ESYT1Q9BSJ8 1104 aa15.69■□□□□ 0.1
CHD1L-202ENST00000369258 PTMAP06454 111 aaKnown RBP15.68■□□□□ 0.1
CHD1L-202ENST00000369258 MX1P20591 662 aa15.68■□□□□ 0.1
CHD1L-202ENST00000369258 LRSAM1Q6UWE0 723 aa15.67■□□□□ 0.1
CHD1L-202ENST00000369258 TERF1P54274 439 aa15.67■□□□□ 0.1
CHD1L-202ENST00000369258 PRDM10Q9NQV6 1147 aa15.67■□□□□ 0.1
CHD1L-202ENST00000369258 TTC21BQ7Z4L5 1316 aa15.67■□□□□ 0.1
CHD1L-202ENST00000369258 UQCRHLA0A096LP55 91 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 ZNF500O60304 480 aaPredicted RBP15.66■□□□□ 0.1
CHD1L-202ENST00000369258 UQCRHP07919 91 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 CHMLP26374 656 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 CEBPAP49715 358 aaPredicted RBP15.66■□□□□ 0.1
CHD1L-202ENST00000369258 FLIIQ13045 1269 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 LRRCC1Q9C099 1032 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 USP25Q9UHP3 1055 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 CNPY2Q9Y2B0 182 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 CLTCQ00610 1675 aaKnown RBP15.66■□□□□ 0.1
CHD1L-202ENST00000369258 CPSF1Q10570 1443 aaKnown RBP15.66■□□□□ 0.1
CHD1L-202ENST00000369258 EDC4Q6P2E9 1401 aaKnown RBP15.66■□□□□ 0.1
CHD1L-202ENST00000369258 USP48Q86UV5 1035 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 TTC12Q9H892 705 aaPredicted RBP15.66■□□□□ 0.1
CHD1L-202ENST00000369258 HMMRO75330 724 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 GNAI2P04899 355 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 EYA1Q99502 592 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 ZKSCAN5Q9Y2L8 839 aa15.66■□□□□ 0.1
CHD1L-202ENST00000369258 SETD1BQ9UPS6 1966 aaKnown RBP15.65■□□□□ 0.1
CHD1L-202ENST00000369258 PREX1Q8TCU6 1659 aa15.65■□□□□ 0.1
CHD1L-202ENST00000369258 RASEFQ8IZ41 740 aa15.65■□□□□ 0.1
CHD1L-202ENST00000369258 TCEANC2Q96MN5 208 aa15.65■□□□□ 0.1
CHD1L-202ENST00000369258 FIBPO43427 364 aa15.65■□□□□ 0.1
CHD1L-202ENST00000369258 CWC27Q6UX04 472 aaKnown RBP15.65■□□□□ 0.1
CHD1L-202ENST00000369258 ATP7BP35670 1465 aa15.64■□□□□ 0.09
CHD1L-202ENST00000369258 MBD3O95983 291 aa15.64■□□□□ 0.09
CHD1L-202ENST00000369258 AMPHP49418 695 aa15.64■□□□□ 0.09
CHD1L-202ENST00000369258 FAM173BQ6P4H8 233 aa15.64■□□□□ 0.09
CHD1L-202ENST00000369258 ROBO2Q9HCK4 1378 aa15.64■□□□□ 0.09
CHD1L-202ENST00000369258 SURF6O75683 361 aaKnown RBP15.64■□□□□ 0.09
CHD1L-202ENST00000369258 LARGE1O95461 756 aa15.64■□□□□ 0.09
CHD1L-202ENST00000369258 DNTTIP2Q5QJE6 756 aaKnown RBP15.64■□□□□ 0.09
CHD1L-202ENST00000369258 HCLS1P14317 486 aaPredicted RBP15.63■□□□□ 0.09
CHD1L-202ENST00000369258 CCDC39Q9UFE4 941 aa15.63■□□□□ 0.09
CHD1L-202ENST00000369258 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
CHD1L-202ENST00000369258 NBPF7P0C2Y1 421 aaPredicted RBP15.63■□□□□ 0.09
CHD1L-202ENST00000369258 STK31Q9BXU1 1019 aa15.63■□□□□ 0.09
CHD1L-202ENST00000369258 PTPRCP08575 1304 aa15.63■□□□□ 0.09
CHD1L-202ENST00000369258 KCNQ3O43525 872 aa15.63■□□□□ 0.09
CHD1L-202ENST00000369258 CSPP1Q1MSJ5 1256 aa15.63■□□□□ 0.09
CHD1L-202ENST00000369258 BRD1O95696 1058 aa15.62■□□□□ 0.09
CHD1L-202ENST00000369258 AATKQ6ZMQ8 1374 aa15.62■□□□□ 0.09
CHD1L-202ENST00000369258 MCM5P33992 734 aa15.62■□□□□ 0.09
CHD1L-202ENST00000369258 SRCIN1Q9C0H9 1055 aa15.62■□□□□ 0.09
CHD1L-202ENST00000369258 USP44Q9H0E7 712 aa15.62■□□□□ 0.09
CHD1L-202ENST00000369258 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.62■□□□□ 0.09
CHD1L-202ENST00000369258 A2ML1A8K2U0 1454 aa15.61■□□□□ 0.09
CHD1L-202ENST00000369258 MCCP23508 829 aa15.61■□□□□ 0.09
CHD1L-202ENST00000369258 MCM2P49736 904 aa15.61■□□□□ 0.09
CHD1L-202ENST00000369258 TSPOAP1O95153 1857 aa15.61■□□□□ 0.09
CHD1L-202ENST00000369258 PPFIA3O75145 1194 aa15.61■□□□□ 0.09
CHD1L-202ENST00000369258 NGDNQ8NEJ9 315 aaKnown RBP15.61■□□□□ 0.09
CHD1L-202ENST00000369258 GIMAP6Q6P9H5 292 aa15.6■□□□□ 0.09
CHD1L-202ENST00000369258 PPP1R42Q7Z4L9 355 aa15.6■□□□□ 0.09
CHD1L-202ENST00000369258 FERMT3Q86UX7 667 aa15.6■□□□□ 0.09
CHD1L-202ENST00000369258 NECAB1Q8N987 351 aa15.6■□□□□ 0.09
CHD1L-202ENST00000369258 IL17REQ8NFR9 667 aa15.6■□□□□ 0.09
CHD1L-202ENST00000369258 CRB1P82279 1406 aa15.6■□□□□ 0.09
CHD1L-202ENST00000369258 SOS1Q07889 1333 aaPredicted RBP15.6■□□□□ 0.09
CHD1L-202ENST00000369258 LTKP29376 864 aa15.6■□□□□ 0.09
CHD1L-202ENST00000369258 MAP7D2Q96T17 732 aa15.6■□□□□ 0.09
CHD1L-202ENST00000369258 TSPY26PQ9H489 355 aa15.6■□□□□ 0.09
CHD1L-202ENST00000369258 ESF1Q9H501 851 aaKnown RBP15.6■□□□□ 0.09
CHD1L-202ENST00000369258 PA2G4Q9UQ80 394 aaKnown RBP15.6■□□□□ 0.09
CHD1L-202ENST00000369258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.6■□□□□ 0.09
CHD1L-202ENST00000369258 SRGAP3O43295 1099 aa15.59■□□□□ 0.09
CHD1L-202ENST00000369258 SPC24Q8NBT2 197 aa15.59■□□□□ 0.09
CHD1L-202ENST00000369258 SYAP1Q96A49 352 aaPredicted RBP15.59■□□□□ 0.09
CHD1L-202ENST00000369258 OSBPL3Q9H4L5 887 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms