RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 PLEKHH1Q9ULM0 1364 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 ERCC3P19447 782 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 B4GALNT4Q76KP1 1039 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 HECW1Q76N89 1606 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 KIF5BP33176 963 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 GSDMDP57764 484 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 NUP133Q8WUM0 1156 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 DHX37Q8IY37 1157 aaKnown RBP11.73□□□□□ -0.53
SIM1-202ENST00000369208 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 SLF2Q8IX21 1173 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 CFAP57Q96MR6 1250 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 ZNF396Q96N95 335 aaPredicted RBP11.72□□□□□ -0.53
SIM1-202ENST00000369208 FGD6Q6ZV73 1430 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 EBAG9O00559 213 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 SPECC1LQ69YQ0 1117 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 WDR63Q8IWG1 891 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 TMEM87AQ8NBN3 555 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 ARFGAP3Q9NP61 516 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 AQRO60306 1485 aaKnown RBP eCLIP11.72□□□□□ -0.53
SIM1-202ENST00000369208 CCT4P50991 539 aaKnown RBP11.72□□□□□ -0.53
SIM1-202ENST00000369208 NCAPD3P42695 1498 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 PPP4R3AQ6IN85 833 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 KLHL10Q6JEL2 608 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 RTEL1-TNFRSF6BF6WH68 1400 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 CDKL5O76039 1030 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 ZNF530Q6P9A1 599 aaPredicted RBP11.72□□□□□ -0.53
SIM1-202ENST00000369208 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
SIM1-202ENST00000369208 EFCAB5A4FU69 1503 aa11.72□□□□□ -0.53
SIM1-202ENST00000369208 EPRSP07814 1512 aaKnown RBP11.72□□□□□ -0.53
SIM1-202ENST00000369208 ANKRD1Q15327 319 aa11.71□□□□□ -0.53
SIM1-202ENST00000369208 DAAM2Q86T65 1068 aa11.71□□□□□ -0.53
SIM1-202ENST00000369208 CNTLNQ9NXG0 1405 aa11.71□□□□□ -0.53
SIM1-202ENST00000369208 CCDC172P0C7W6 258 aa11.71□□□□□ -0.53
SIM1-202ENST00000369208 SPDYE4A6NLX3 237 aa11.71□□□□□ -0.53
SIM1-202ENST00000369208 XPCQ01831 940 aaPredicted RBP11.71□□□□□ -0.53
SIM1-202ENST00000369208 COG6Q9Y2V7 657 aa11.71□□□□□ -0.53
SIM1-202ENST00000369208 MTMR7Q9Y216 660 aa11.71□□□□□ -0.53
SIM1-202ENST00000369208 DBN1Q16643 649 aa11.71□□□□□ -0.54
SIM1-202ENST00000369208 SMARCC1Q92922 1105 aaPredicted RBP11.71□□□□□ -0.54
SIM1-202ENST00000369208 WDR33Q9C0J8 1336 aaKnown RBP11.71□□□□□ -0.54
SIM1-202ENST00000369208 GNAI2P04899 355 aa11.71□□□□□ -0.54
SIM1-202ENST00000369208 ATAD2Q6PL18 1390 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 CDC45O75419 566 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 NUCKS1Q9H1E3 243 aaKnown RBP11.7□□□□□ -0.54
SIM1-202ENST00000369208 PRKRIP1Q9H875 184 aaPredicted RBP11.7□□□□□ -0.54
SIM1-202ENST00000369208 NOL7Q9UMY1 257 aaKnown RBP11.7□□□□□ -0.54
SIM1-202ENST00000369208 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 ZFYP08048 801 aaPredicted RBP11.7□□□□□ -0.54
SIM1-202ENST00000369208 GGNBP2Q9H3C7 697 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 LRRFIP2Q9Y608 721 aaKnown RBP11.7□□□□□ -0.54
SIM1-202ENST00000369208 ZKSCAN8Q15776 578 aaPredicted RBP11.7□□□□□ -0.54
SIM1-202ENST00000369208 C10orf67Q8IYJ2 551 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 CASKIN1Q8WXD9 1431 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 MPHOSPH6Q99547 160 aaKnown RBP11.7□□□□□ -0.54
SIM1-202ENST00000369208 K7ELQ4 463 aaPredicted RBP11.7□□□□□ -0.54
SIM1-202ENST00000369208 CCDC148Q8NFR7 591 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 FAM184BQ9ULE4 1060 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 CCDC69A6NI79 296 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 SURF6O75683 361 aaKnown RBP11.7□□□□□ -0.54
SIM1-202ENST00000369208 HDGFL1Q5TGJ6 251 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 PRAM1Q96QH2 718 aa11.7□□□□□ -0.54
SIM1-202ENST00000369208 KINO60870 393 aaKnown RBP11.69□□□□□ -0.54
SIM1-202ENST00000369208 MYRIPQ8NFW9 859 aa11.69□□□□□ -0.54
SIM1-202ENST00000369208 CTNNA3Q9UI47 895 aa11.69□□□□□ -0.54
SIM1-202ENST00000369208 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
SIM1-202ENST00000369208 CCDC83Q8IWF9 413 aa11.69□□□□□ -0.54
SIM1-202ENST00000369208 CEP83Q9Y592 693 aa11.69□□□□□ -0.54
SIM1-202ENST00000369208 NEBLO76041 1014 aa11.69□□□□□ -0.54
SIM1-202ENST00000369208 RLBP1P12271 317 aa11.69□□□□□ -0.54
SIM1-202ENST00000369208 MICALL1Q8N3F8 863 aa11.69□□□□□ -0.54
SIM1-202ENST00000369208 ANKS4BQ8N8V4 417 aa11.68□□□□□ -0.54
SIM1-202ENST00000369208 ANKRD30BQ9BXX2 1392 aa11.68□□□□□ -0.54
SIM1-202ENST00000369208 EIF5P55010 431 aaKnown RBP11.68□□□□□ -0.54
SIM1-202ENST00000369208 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
SIM1-202ENST00000369208 SMTNL1A8MU46 457 aa11.68□□□□□ -0.54
SIM1-202ENST00000369208 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
SIM1-202ENST00000369208 HDAC1Q13547 482 aaPredicted RBP11.68□□□□□ -0.54
SIM1-202ENST00000369208 ZNF76P36508 570 aa11.68□□□□□ -0.54
SIM1-202ENST00000369208 SPATS2Q86XZ4 545 aaKnown RBP11.68□□□□□ -0.54
SIM1-202ENST00000369208 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
SIM1-202ENST00000369208 EHMT1Q9H9B1 1298 aa11.68□□□□□ -0.54
SIM1-202ENST00000369208 YY1AP1Q9H869 796 aa11.68□□□□□ -0.54
SIM1-202ENST00000369208 RPUSD2Q8IZ73 545 aaKnown RBP11.67□□□□□ -0.54
SIM1-202ENST00000369208 DHX29Q7Z478 1369 aaKnown RBP11.67□□□□□ -0.54
SIM1-202ENST00000369208 CCDC183Q5T5S1 534 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 WASF1Q92558 559 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 NAA25Q14CX7 972 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 CASQ1P31415 396 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 ARHGAP25P42331 645 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
SIM1-202ENST00000369208 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
SIM1-202ENST00000369208 TRERF1Q96PN7 1200 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 SRCIN1Q9C0H9 1055 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 ATF7IPQ6VMQ6 1270 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 SPC24Q8NBT2 197 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 CDK19Q9BWU1 502 aa11.67□□□□□ -0.54
SIM1-202ENST00000369208 CAVIN4Q5BKX8 364 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms