RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 C8orf58Q8NAV2 365 aa18.83■□□□□ 0.61
SEMA6C-202ENST00000368912 TRIM6-TRIM34B2RNG4 842 aa18.83■□□□□ 0.6
SEMA6C-202ENST00000368912 GNAI1P63096 354 aa18.83■□□□□ 0.6
SEMA6C-202ENST00000368912 WDR63Q8IWG1 891 aa18.83■□□□□ 0.6
SEMA6C-202ENST00000368912 TRIM34Q9BYJ4 488 aa18.83■□□□□ 0.6
SEMA6C-202ENST00000368912 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.6
SEMA6C-202ENST00000368912 RARSP54136 660 aaKnown RBP18.82■□□□□ 0.6
SEMA6C-202ENST00000368912 PTMAP06454 111 aaKnown RBP18.82■□□□□ 0.6
SEMA6C-202ENST00000368912 FLT4P35916 1363 aa18.82■□□□□ 0.6
SEMA6C-202ENST00000368912 FAM177BA6PVY3 158 aa18.81■□□□□ 0.6
SEMA6C-202ENST00000368912 LGR6Q9HBX8 967 aa18.81■□□□□ 0.6
SEMA6C-202ENST00000368912 SLIT1O75093 1534 aa18.81■□□□□ 0.6
SEMA6C-202ENST00000368912 NRXN3Q9Y4C0 1643 aa18.81■□□□□ 0.6
SEMA6C-202ENST00000368912 PIP4K2AP48426 406 aaPredicted RBP18.81■□□□□ 0.6
SEMA6C-202ENST00000368912 JARID2Q92833 1246 aaPredicted RBP18.81■□□□□ 0.6
SEMA6C-202ENST00000368912 MYCNP04198 464 aaPredicted RBP18.81■□□□□ 0.6
SEMA6C-202ENST00000368912 MYOM1P52179 1685 aa18.8■□□□□ 0.6
SEMA6C-202ENST00000368912 TECPR2O15040 1411 aa18.8■□□□□ 0.6
SEMA6C-202ENST00000368912 TULP1O00294 542 aaPredicted RBP18.8■□□□□ 0.6
SEMA6C-202ENST00000368912 AIMP1Q12904 312 aaKnown RBP18.8■□□□□ 0.6
SEMA6C-202ENST00000368912 CHRM1P11229 460 aaPredicted RBP18.8■□□□□ 0.6
SEMA6C-202ENST00000368912 SLC39A6Q13433 755 aa18.8■□□□□ 0.6
SEMA6C-202ENST00000368912 ZKSCAN2Q63HK3 967 aa18.8■□□□□ 0.6
SEMA6C-202ENST00000368912 TBC1D2Q9BYX2 928 aa18.8■□□□□ 0.6
SEMA6C-202ENST00000368912 ADGRL3Q9HAR2 1447 aa18.8■□□□□ 0.6
SEMA6C-202ENST00000368912 IP6K1Q92551 441 aa18.79■□□□□ 0.6
SEMA6C-202ENST00000368912 PIK3R4Q99570 1358 aa18.79■□□□□ 0.6
SEMA6C-202ENST00000368912 BLMP54132 1417 aaPredicted RBP18.79■□□□□ 0.6
SEMA6C-202ENST00000368912 RLBP1P12271 317 aa18.79■□□□□ 0.6
SEMA6C-202ENST00000368912 ATP2B3Q16720 1220 aa18.79■□□□□ 0.6
SEMA6C-202ENST00000368912 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.78■□□□□ 0.6
SEMA6C-202ENST00000368912 GAS2L2Q8NHY3 880 aa18.78■□□□□ 0.6
SEMA6C-202ENST00000368912 ANTXR1Q9H6X2 564 aa18.78■□□□□ 0.6
SEMA6C-202ENST00000368912 BCCIPQ9P287 314 aaKnown RBP eCLIP18.78■□□□□ 0.6
SEMA6C-202ENST00000368912 GNAT3A8MTJ3 354 aa18.78■□□□□ 0.6
SEMA6C-202ENST00000368912 DIP2AQ14689 1571 aa18.78■□□□□ 0.6
SEMA6C-202ENST00000368912 SEC24BO95487 1268 aa18.77■□□□□ 0.6
SEMA6C-202ENST00000368912 SLC4A2P04920 1241 aa18.77■□□□□ 0.6
SEMA6C-202ENST00000368912 DLC1Q96QB1 1528 aa18.77■□□□□ 0.6
SEMA6C-202ENST00000368912 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.6
SEMA6C-202ENST00000368912 F6X3S4 739 aa18.77■□□□□ 0.59
SEMA6C-202ENST00000368912 PLEKHO1Q53GL0 409 aaPredicted RBP18.77■□□□□ 0.59
SEMA6C-202ENST00000368912 STK31Q9BXU1 1019 aa18.76■□□□□ 0.59
SEMA6C-202ENST00000368912 RNF216Q9NWF9 866 aaPredicted RBP18.76■□□□□ 0.59
SEMA6C-202ENST00000368912 KCNG1Q9UIX4 513 aa18.76■□□□□ 0.59
SEMA6C-202ENST00000368912 PTCH1Q13635 1447 aa18.76■□□□□ 0.59
SEMA6C-202ENST00000368912 PTCD1O75127 700 aaKnown RBP18.76■□□□□ 0.59
SEMA6C-202ENST00000368912 TATP17735 454 aaPredicted RBP18.76■□□□□ 0.59
SEMA6C-202ENST00000368912 CCDC66A2RUB6 948 aa18.75■□□□□ 0.59
SEMA6C-202ENST00000368912 FAM193AP78312 1265 aa18.75■□□□□ 0.59
SEMA6C-202ENST00000368912 FKBP5Q13451 457 aaPredicted RBP18.75■□□□□ 0.59
SEMA6C-202ENST00000368912 KIAA0232Q92628 1395 aa18.74■□□□□ 0.59
SEMA6C-202ENST00000368912 PTMSP20962 102 aa18.74■□□□□ 0.59
SEMA6C-202ENST00000368912 BTG4Q9NY30 223 aa18.74■□□□□ 0.59
SEMA6C-202ENST00000368912 MED14O60244 1454 aa18.74■□□□□ 0.59
SEMA6C-202ENST00000368912 SBNO1A3KN83 1393 aa18.74■□□□□ 0.59
SEMA6C-202ENST00000368912 CLGNO14967 610 aa18.74■□□□□ 0.59
SEMA6C-202ENST00000368912 KCNQ3O43525 872 aa18.74■□□□□ 0.59
SEMA6C-202ENST00000368912 ARHGEF25Q86VW2 580 aa18.73■□□□□ 0.59
SEMA6C-202ENST00000368912 PDCL2Q8N4E4 241 aa18.73■□□□□ 0.59
SEMA6C-202ENST00000368912 ZNF521Q96K83 1311 aa18.73■□□□□ 0.59
SEMA6C-202ENST00000368912 C1orf167Q5SNV9 1468 aa18.73■□□□□ 0.59
SEMA6C-202ENST00000368912 IPO8O15397 1037 aaKnown RBP18.72■□□□□ 0.59
SEMA6C-202ENST00000368912 GBP4Q96PP9 640 aa18.72■□□□□ 0.59
SEMA6C-202ENST00000368912 TMEM57Q8N5G2 664 aa18.72■□□□□ 0.59
SEMA6C-202ENST00000368912 BTBD11A6QL63 1104 aa18.72■□□□□ 0.59
SEMA6C-202ENST00000368912 TIGD1Q96MW7 591 aa18.72■□□□□ 0.59
SEMA6C-202ENST00000368912 ERICH4A6NGS2 130 aa18.71■□□□□ 0.59
SEMA6C-202ENST00000368912 MYL6BP14649 208 aa18.71■□□□□ 0.59
SEMA6C-202ENST00000368912 TRIM27P14373 513 aa18.71■□□□□ 0.59
SEMA6C-202ENST00000368912 CFAP44Q96MT7 982 aa18.71■□□□□ 0.59
SEMA6C-202ENST00000368912 ADAMTSL3P82987 1691 aa18.7■□□□□ 0.58
SEMA6C-202ENST00000368912 HOMEZQ8IX15 550 aa18.7■□□□□ 0.58
SEMA6C-202ENST00000368912 C8orf37Q96NL8 207 aa18.7■□□□□ 0.58
SEMA6C-202ENST00000368912 LARP1Q6PKG0 1096 aaKnown RBP18.7■□□□□ 0.58
SEMA6C-202ENST00000368912 IL17REQ8NFR9 667 aa18.7■□□□□ 0.58
SEMA6C-202ENST00000368912 PPP1R9BQ96SB3 815 aa18.7■□□□□ 0.58
SEMA6C-202ENST00000368912 HDGFL1Q5TGJ6 251 aa18.69■□□□□ 0.58
SEMA6C-202ENST00000368912 MEX3CQ5U5Q3 659 aaKnown RBP18.69■□□□□ 0.58
SEMA6C-202ENST00000368912 GOLGA6L22H0YM25 854 aa18.69■□□□□ 0.58
SEMA6C-202ENST00000368912 NOL7Q9UMY1 257 aaKnown RBP18.69■□□□□ 0.58
SEMA6C-202ENST00000368912 HSCBQ8IWL3 235 aa18.68■□□□□ 0.58
SEMA6C-202ENST00000368912 NFATC2IPQ8NCF5 419 aa18.68■□□□□ 0.58
SEMA6C-202ENST00000368912 DDX49Q9Y6V7 483 aaKnown RBP18.68■□□□□ 0.58
SEMA6C-202ENST00000368912 U2AF2P26368 475 aaKnown RBP eCLIP18.68■□□□□ 0.58
SEMA6C-202ENST00000368912 NGLY1Q96IV0 654 aa18.68■□□□□ 0.58
SEMA6C-202ENST00000368912 CDC42BPGQ6DT37 1551 aa18.67■□□□□ 0.58
SEMA6C-202ENST00000368912 SKOR2Q2VWA4 1001 aaPredicted RBP18.67■□□□□ 0.58
SEMA6C-202ENST00000368912 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
SEMA6C-202ENST00000368912 TTC5Q8N0Z6 440 aa18.67■□□□□ 0.58
SEMA6C-202ENST00000368912 ZNF500O60304 480 aaPredicted RBP18.67■□□□□ 0.58
SEMA6C-202ENST00000368912 IFT57Q9NWB7 429 aa18.67■□□□□ 0.58
SEMA6C-202ENST00000368912 MPNDQ8N594 471 aa18.67■□□□□ 0.58
SEMA6C-202ENST00000368912 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
SEMA6C-202ENST00000368912 RBM42Q9BTD8 480 aaKnown RBP18.66■□□□□ 0.58
SEMA6C-202ENST00000368912 AATKQ6ZMQ8 1374 aa18.66■□□□□ 0.58
SEMA6C-202ENST00000368912 VAMP4O75379 141 aa18.66■□□□□ 0.58
SEMA6C-202ENST00000368912 G2E3Q7L622 706 aa18.66■□□□□ 0.58
SEMA6C-202ENST00000368912 TOM1O60784 492 aa18.65■□□□□ 0.58
SEMA6C-202ENST00000368912 TAF7Q15545 349 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms