RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 TMX3Q96JJ7 454 aa12.77□□□□□ -0.37
LYSMD1-201ENST00000368908 MAP2P11137 1827 aaKnown RBP12.77□□□□□ -0.37
LYSMD1-201ENST00000368908 LMOD3Q0VAK6 560 aa12.77□□□□□ -0.37
LYSMD1-201ENST00000368908 FKBP5Q13451 457 aaPredicted RBP12.77□□□□□ -0.37
LYSMD1-201ENST00000368908 NOLC1Q14978 699 aaKnown RBP eCLIP12.77□□□□□ -0.37
LYSMD1-201ENST00000368908 OSBPL3Q9H4L5 887 aa12.77□□□□□ -0.37
LYSMD1-201ENST00000368908 MBIPQ9NS73 344 aa12.77□□□□□ -0.37
LYSMD1-201ENST00000368908 TMEM87AQ8NBN3 555 aa12.76□□□□□ -0.37
LYSMD1-201ENST00000368908 XRN1Q8IZH2 1706 aaKnown RBP12.76□□□□□ -0.37
LYSMD1-201ENST00000368908 RTL1A6NKG5 1358 aa12.76□□□□□ -0.37
LYSMD1-201ENST00000368908 RGS12O14924 1447 aa12.76□□□□□ -0.37
LYSMD1-201ENST00000368908 SSH2Q76I76 1423 aa12.76□□□□□ -0.37
LYSMD1-201ENST00000368908 ANAPC15P60006 121 aa12.76□□□□□ -0.37
LYSMD1-201ENST00000368908 DNTTIP2Q5QJE6 756 aaKnown RBP12.76□□□□□ -0.37
LYSMD1-201ENST00000368908 PRDM10Q9NQV6 1147 aa12.76□□□□□ -0.37
LYSMD1-201ENST00000368908 STRCP1A6NGW2 1772 aa12.75□□□□□ -0.37
LYSMD1-201ENST00000368908 LETM1O95202 739 aaPredicted RBP12.75□□□□□ -0.37
LYSMD1-201ENST00000368908 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
LYSMD1-201ENST00000368908 CDK12Q9NYV4 1490 aaPredicted RBP12.75□□□□□ -0.37
LYSMD1-201ENST00000368908 CEP85Q6P2H3 762 aa12.74□□□□□ -0.37
LYSMD1-201ENST00000368908 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
LYSMD1-201ENST00000368908 C16orf71Q8IYS4 520 aaPredicted RBP12.74□□□□□ -0.37
LYSMD1-201ENST00000368908 HAP1P54257 671 aaPredicted RBP12.74□□□□□ -0.37
LYSMD1-201ENST00000368908 SRPK2P78362 688 aaKnown RBP12.74□□□□□ -0.37
LYSMD1-201ENST00000368908 TPM3P06753 285 aa12.73□□□□□ -0.37
LYSMD1-201ENST00000368908 MCCP23508 829 aa12.73□□□□□ -0.37
LYSMD1-201ENST00000368908 OTUD7AQ8TE49 926 aaPredicted RBP12.73□□□□□ -0.37
LYSMD1-201ENST00000368908 ZHX1Q9UKY1 873 aaPredicted RBP12.73□□□□□ -0.37
LYSMD1-201ENST00000368908 ATP7BP35670 1465 aa12.73□□□□□ -0.37
LYSMD1-201ENST00000368908 KCNA6P17658 529 aa12.73□□□□□ -0.37
LYSMD1-201ENST00000368908 NEK4P51957 841 aa12.73□□□□□ -0.37
LYSMD1-201ENST00000368908 CCDC183Q5T5S1 534 aa12.73□□□□□ -0.37
LYSMD1-201ENST00000368908 WDR33Q9C0J8 1336 aaKnown RBP12.72□□□□□ -0.37
LYSMD1-201ENST00000368908 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
LYSMD1-201ENST00000368908 SLC26A8Q96RN1 970 aa12.72□□□□□ -0.37
LYSMD1-201ENST00000368908 DIAPH3Q9NSV4 1193 aa12.72□□□□□ -0.37
LYSMD1-201ENST00000368908 YTHDC2Q9H6S0 1430 aaKnown RBP12.72□□□□□ -0.37
LYSMD1-201ENST00000368908 EPB41L2O43491 1005 aaKnown RBP12.72□□□□□ -0.37
LYSMD1-201ENST00000368908 C8orf58Q8NAV2 365 aa12.72□□□□□ -0.37
LYSMD1-201ENST00000368908 ARID3AQ99856 593 aa12.72□□□□□ -0.37
LYSMD1-201ENST00000368908 TCHHQ07283 1943 aa12.72□□□□□ -0.37
LYSMD1-201ENST00000368908 PHACTR3Q96KR7 559 aa12.71□□□□□ -0.37
LYSMD1-201ENST00000368908 RPAP1Q9BWH6 1393 aaPredicted RBP12.71□□□□□ -0.37
LYSMD1-201ENST00000368908 ZNF335Q9H4Z2 1342 aaPredicted RBP12.71□□□□□ -0.37
LYSMD1-201ENST00000368908 THUMPD2Q9BTF0 503 aaKnown RBP12.71□□□□□ -0.37
LYSMD1-201ENST00000368908 POLKQ9UBT6 870 aa12.71□□□□□ -0.37
LYSMD1-201ENST00000368908 MSH6P52701 1360 aa12.71□□□□□ -0.38
LYSMD1-201ENST00000368908 PTPRCP08575 1304 aa12.71□□□□□ -0.38
LYSMD1-201ENST00000368908 HMMRO75330 724 aa12.7□□□□□ -0.38
LYSMD1-201ENST00000368908 ADCY5O95622 1261 aa12.7□□□□□ -0.38
LYSMD1-201ENST00000368908 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
LYSMD1-201ENST00000368908 ANKRD7Q92527 254 aa12.7□□□□□ -0.38
LYSMD1-201ENST00000368908 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
LYSMD1-201ENST00000368908 USP25Q9UHP3 1055 aa12.7□□□□□ -0.38
LYSMD1-201ENST00000368908 PTPRUQ92729 1446 aa12.7□□□□□ -0.38
LYSMD1-201ENST00000368908 TECPR2O15040 1411 aa12.7□□□□□ -0.38
LYSMD1-201ENST00000368908 ESYT1Q9BSJ8 1104 aa12.7□□□□□ -0.38
LYSMD1-201ENST00000368908 METP08581 1390 aa12.7□□□□□ -0.38
LYSMD1-201ENST00000368908 MX1P20591 662 aa12.69□□□□□ -0.38
LYSMD1-201ENST00000368908 PDE1AP54750 535 aa12.69□□□□□ -0.38
LYSMD1-201ENST00000368908 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
LYSMD1-201ENST00000368908 USP48Q86UV5 1035 aa12.69□□□□□ -0.38
LYSMD1-201ENST00000368908 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
LYSMD1-201ENST00000368908 KIAA0232Q92628 1395 aa12.69□□□□□ -0.38
LYSMD1-201ENST00000368908 NRKQ7Z2Y5 1582 aa12.69□□□□□ -0.38
LYSMD1-201ENST00000368908 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
LYSMD1-201ENST00000368908 ATP2B3Q16720 1220 aa12.69□□□□□ -0.38
LYSMD1-201ENST00000368908 PDCL2Q8N4E4 241 aa12.69□□□□□ -0.38
LYSMD1-201ENST00000368908 ELL2O00472 640 aaPredicted RBP12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 CTIFO43310 598 aaKnown RBP12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 SMARCA5O60264 1052 aaPredicted RBP12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 KDM4AO75164 1064 aa12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 GADD45BO75293 160 aaPredicted RBP12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 IL13P35225 146 aa12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 CBX1P83916 185 aa12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 CHAF1AQ13111 956 aaPredicted RBP12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 SYCP1Q15431 976 aa12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 AATKQ6ZMQ8 1374 aa12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 SALL3Q9BXA9 1300 aa12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 XIRP1Q702N8 1843 aaKnown RBP12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 SAFB2Q14151 953 aaKnown RBP eCLIP12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 TAF3Q5VWG9 929 aa12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 KIAA1524Q8TCG1 905 aa12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 FEZ1Q99689 392 aa12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 TTC12Q9H892 705 aaPredicted RBP12.68□□□□□ -0.38
LYSMD1-201ENST00000368908 UBE2HP62256 183 aa12.67□□□□□ -0.38
LYSMD1-201ENST00000368908 TSC1Q92574 1164 aa12.67□□□□□ -0.38
LYSMD1-201ENST00000368908 N4BP2Q86UW6 1770 aaPredicted RBP12.67□□□□□ -0.38
LYSMD1-201ENST00000368908 HMOX1P09601 288 aa12.66□□□□□ -0.38
LYSMD1-201ENST00000368908 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
LYSMD1-201ENST00000368908 ZNF830Q96NB3 372 aaPredicted RBP12.66□□□□□ -0.38
LYSMD1-201ENST00000368908 FUCA2Q9BTY2 467 aa12.66□□□□□ -0.38
LYSMD1-201ENST00000368908 STK26Q9P289 416 aa12.66□□□□□ -0.38
LYSMD1-201ENST00000368908 SIRT1Q96EB6 747 aa12.66□□□□□ -0.38
LYSMD1-201ENST00000368908 AMOTL2Q9Y2J4 779 aa12.66□□□□□ -0.38
LYSMD1-201ENST00000368908 GOLGA6L6A8MZA4 724 aa12.65□□□□□ -0.38
LYSMD1-201ENST00000368908 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
LYSMD1-201ENST00000368908 HCLS1P14317 486 aaPredicted RBP12.65□□□□□ -0.38
LYSMD1-201ENST00000368908 MEIS3Q99687 375 aa12.65□□□□□ -0.38
LYSMD1-201ENST00000368908 SRCIN1Q9C0H9 1055 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms