RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 SPON1Q9HCB6 807 aa24.63■■□□□ 1.53
CHTOP-202ENST00000368687 KCNQ4P56696 695 aa24.62■■□□□ 1.53
CHTOP-202ENST00000368687 ZNF827Q17R98 1081 aa24.62■■□□□ 1.53
CHTOP-202ENST00000368687 RNMTO43148 476 aaKnown RBP24.61■■□□□ 1.53
CHTOP-202ENST00000368687 SLC52A2Q9HAB3 445 aa24.61■■□□□ 1.53
CHTOP-202ENST00000368687 LOC102724428A0A0B4J2F2 783 aa24.6■■□□□ 1.53
CHTOP-202ENST00000368687 SIK1P57059 783 aa24.6■■□□□ 1.53
CHTOP-202ENST00000368687 ATG3Q9NT62 314 aa24.6■■□□□ 1.53
CHTOP-202ENST00000368687 ASAP1Q9ULH1 1129 aa24.6■■□□□ 1.53
CHTOP-202ENST00000368687 ZBTB7AO95365 584 aa24.59■■□□□ 1.53
CHTOP-202ENST00000368687 NFATC2IPQ8NCF5 419 aa24.59■■□□□ 1.53
CHTOP-202ENST00000368687 AKT1S1Q96B36 256 aa24.59■■□□□ 1.53
CHTOP-202ENST00000368687 PHACTR3Q96KR7 559 aa24.57■■□□□ 1.52
CHTOP-202ENST00000368687 C4BP0C0L5 1744 aa24.56■■□□□ 1.52
CHTOP-202ENST00000368687 HTATSF1O43719 755 aaKnown RBP24.56■■□□□ 1.52
CHTOP-202ENST00000368687 TFCP2L1Q9NZI6 479 aa24.56■■□□□ 1.52
CHTOP-202ENST00000368687 MAPK8IP3Q9UPT6 1336 aa24.56■■□□□ 1.52
CHTOP-202ENST00000368687 CICQ96RK0 1608 aaPredicted RBP24.55■■□□□ 1.52
CHTOP-202ENST00000368687 TEFQ10587 303 aa24.55■■□□□ 1.52
CHTOP-202ENST00000368687 RTF1Q92541 710 aaKnown RBP24.55■■□□□ 1.52
CHTOP-202ENST00000368687 LGR6Q9HBX8 967 aa24.55■■□□□ 1.52
CHTOP-202ENST00000368687 CEMIPQ8WUJ3 1361 aa24.54■■□□□ 1.52
CHTOP-202ENST00000368687 ATP6V1AP38606 617 aa24.54■■□□□ 1.52
CHTOP-202ENST00000368687 WDR43Q15061 677 aaKnown RBP eCLIP24.54■■□□□ 1.527e-6■■■■■ 27.3
CHTOP-202ENST00000368687 FLAD1Q8NFF5 587 aa24.54■■□□□ 1.52
CHTOP-202ENST00000368687 TUBGCP6Q96RT7 1819 aa24.54■■□□□ 1.52
CHTOP-202ENST00000368687 PTGER2P43116 358 aa24.53■■□□□ 1.52
CHTOP-202ENST00000368687 ATF5Q9Y2D1 282 aaPredicted RBP24.53■■□□□ 1.52
CHTOP-202ENST00000368687 SIPA1L3O60292 1781 aaPredicted RBP24.52■■□□□ 1.52
CHTOP-202ENST00000368687 ANP32CO43423 234 aa24.52■■□□□ 1.52
CHTOP-202ENST00000368687 SLC16A10Q8TF71 515 aa24.52■■□□□ 1.52
CHTOP-202ENST00000368687 AK7Q96M32 723 aa24.52■■□□□ 1.52
CHTOP-202ENST00000368687 PLEKHF1Q96S99 279 aa24.52■■□□□ 1.52
CHTOP-202ENST00000368687 PPP1R1BQ9UD71 204 aaPredicted RBP24.52■■□□□ 1.52
CHTOP-202ENST00000368687 RBM42Q9BTD8 480 aaKnown RBP24.51■■□□□ 1.51
CHTOP-202ENST00000368687 COL5A3P25940 1745 aaPredicted RBP24.5■■□□□ 1.51
CHTOP-202ENST00000368687 MTFR1LQ9H019 292 aa24.5■■□□□ 1.51
CHTOP-202ENST00000368687 DLG5Q8TDM6 1919 aa24.49■■□□□ 1.51
CHTOP-202ENST00000368687 IL17REQ8NFR9 667 aa24.49■■□□□ 1.51
CHTOP-202ENST00000368687 UBR2Q8IWV8 1755 aa24.49■■□□□ 1.51
CHTOP-202ENST00000368687 UBR3Q6ZT12 1888 aa24.48■■□□□ 1.51
CHTOP-202ENST00000368687 PNPLA7Q6ZV29 1317 aa24.48■■□□□ 1.51
CHTOP-202ENST00000368687 TTC5Q8N0Z6 440 aa24.48■■□□□ 1.51
CHTOP-202ENST00000368687 SGIP1Q9BQI5 828 aa24.48■■□□□ 1.51
CHTOP-202ENST00000368687 NFE2L2Q16236 605 aa24.47■■□□□ 1.51
CHTOP-202ENST00000368687 PTCD1O75127 700 aaKnown RBP24.46■■□□□ 1.51
CHTOP-202ENST00000368687 SSFA2P28290 1259 aa24.46■■□□□ 1.51
CHTOP-202ENST00000368687 ITPK1Q13572 414 aa24.46■■□□□ 1.51
CHTOP-202ENST00000368687 RC3H1Q5TC82 1133 aaKnown RBP24.46■■□□□ 1.51
CHTOP-202ENST00000368687 VSIG10Q8N0Z9 540 aa24.46■■□□□ 1.51
CHTOP-202ENST00000368687 LINC00116Q8NCU8 138 aa24.46■■□□□ 1.51
CHTOP-202ENST00000368687 CNTNAP4Q9C0A0 1308 aa24.45■■□□□ 1.5
CHTOP-202ENST00000368687 KCPQ6ZWJ8 1503 aa24.45■■□□□ 1.5
CHTOP-202ENST00000368687 LMOD3Q0VAK6 560 aa24.44■■□□□ 1.5
CHTOP-202ENST00000368687 TJP1Q07157 1748 aa24.44■■□□□ 1.5
CHTOP-202ENST00000368687 COL24A1Q17RW2 1714 aa24.42■■□□□ 1.5
CHTOP-202ENST00000368687 ADRA2BP18089 450 aa24.42■■□□□ 1.5
CHTOP-202ENST00000368687 ZNF790Q6PG37 636 aa24.42■■□□□ 1.5
CHTOP-202ENST00000368687 RUNDC1Q96C34 613 aa24.42■■□□□ 1.5
CHTOP-202ENST00000368687 SLC4A9Q96Q91 983 aa24.42■■□□□ 1.5
CHTOP-202ENST00000368687 BTBD11A6QL63 1104 aa24.41■■□□□ 1.5
CHTOP-202ENST00000368687 GNPATO15228 680 aa24.41■■□□□ 1.5
CHTOP-202ENST00000368687 SLC39A6Q13433 755 aa24.41■■□□□ 1.5
CHTOP-202ENST00000368687 MCM10Q7L590 875 aa24.41■■□□□ 1.5
CHTOP-202ENST00000368687 MSH5O43196 834 aa24.4■■□□□ 1.5
CHTOP-202ENST00000368687 PNISRQ8TF01 805 aaKnown RBP24.4■■□□□ 1.5
CHTOP-202ENST00000368687 TEX13AQ9BXU3 409 aaPredicted RBP24.4■■□□□ 1.5
CHTOP-202ENST00000368687 RTCBQ9Y3I0 505 aaKnown RBP24.4■■□□□ 1.5
CHTOP-202ENST00000368687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.39■■□□□ 1.49
CHTOP-202ENST00000368687 COL23A1Q86Y22 540 aaPredicted RBP24.39■■□□□ 1.49
CHTOP-202ENST00000368687 ADAMTS8Q9UP79 889 aa24.39■■□□□ 1.49
CHTOP-202ENST00000368687 POLD1P28340 1107 aa24.38■■□□□ 1.49
CHTOP-202ENST00000368687 FMNL2Q96PY5 1086 aa24.38■■□□□ 1.49
CHTOP-202ENST00000368687 MYH14Q7Z406 1995 aaKnown RBP24.37■■□□□ 1.49
CHTOP-202ENST00000368687 TAF7Q15545 349 aaPredicted RBP24.37■■□□□ 1.49
CHTOP-202ENST00000368687 FHDC1Q9C0D6 1143 aaPredicted RBP24.37■■□□□ 1.49
CHTOP-202ENST00000368687 STARD3NLO95772 234 aa24.36■■□□□ 1.49
CHTOP-202ENST00000368687 TMPOP42166 694 aaKnown RBP24.36■■□□□ 1.49
CHTOP-202ENST00000368687 CRKLP46109 303 aaKnown RBP24.36■■□□□ 1.49
CHTOP-202ENST00000368687 RIPK4P57078 832 aa24.36■■□□□ 1.49
CHTOP-202ENST00000368687 AMIGO3Q86WK7 504 aa24.36■■□□□ 1.49
CHTOP-202ENST00000368687 ARXQ96QS3 562 aa24.36■■□□□ 1.49
CHTOP-202ENST00000368687 HEG1Q9ULI3 1381 aa24.36■■□□□ 1.49
CHTOP-202ENST00000368687 RPS6KA4O75676 772 aa24.35■■□□□ 1.49
CHTOP-202ENST00000368687 PHF14O94880 888 aa24.35■■□□□ 1.49
CHTOP-202ENST00000368687 TRAPPC3LQ5T215 181 aa24.35■■□□□ 1.49
CHTOP-202ENST00000368687 DCTN1Q14203 1278 aa24.34■■□□□ 1.49
CHTOP-202ENST00000368687 ZNF496Q96IT1 587 aaPredicted RBP24.34■■□□□ 1.49
CHTOP-202ENST00000368687 DNAJC10Q8IXB1 793 aa24.33■■□□□ 1.49
CHTOP-202ENST00000368687 CCDC146Q8IYE0 955 aa24.33■■□□□ 1.49
CHTOP-202ENST00000368687 SYT17Q9BSW7 474 aa24.33■■□□□ 1.49
CHTOP-202ENST00000368687 MRS2Q9HD23 443 aa24.33■■□□□ 1.49
CHTOP-202ENST00000368687 CCDC87Q9NVE4 849 aa24.33■■□□□ 1.49
CHTOP-202ENST00000368687 KDM3BQ7LBC6 1761 aa24.32■■□□□ 1.48
CHTOP-202ENST00000368687 CYP19A1P11511 503 aaPredicted RBP24.32■■□□□ 1.48
CHTOP-202ENST00000368687 SMIM5Q71RC9 77 aa24.32■■□□□ 1.48
CHTOP-202ENST00000368687 BABAM1Q9NWV8 329 aa24.32■■□□□ 1.48
CHTOP-202ENST00000368687 RFC4P35249 363 aa24.3■■□□□ 1.48
CHTOP-202ENST00000368687 C4AP0C0L4 1744 aa24.3■■□□□ 1.48
CHTOP-202ENST00000368687 MSL1Q68DK7 614 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms