RNA–Protein interactions for RNA: ENST00000368521.9

C1orf43-206, Transcript of chromosome 1 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf43, Length 1,708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-206ENST00000368521 ABCC6O95255 1503 aa18.52■□□□□ 0.56
C1orf43-206ENST00000368521 KDM3BQ7LBC6 1761 aa18.52■□□□□ 0.56
C1orf43-206ENST00000368521 CDC45O75419 566 aa18.52■□□□□ 0.55
C1orf43-206ENST00000368521 GNAI2P04899 355 aa18.52■□□□□ 0.55
C1orf43-206ENST00000368521 KRT28Q7Z3Y7 464 aa18.52■□□□□ 0.55
C1orf43-206ENST00000368521 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
C1orf43-206ENST00000368521 ALS2Q96Q42 1657 aa18.5■□□□□ 0.55
C1orf43-206ENST00000368521 EIF4A1P60842 406 aaKnown RBP18.5■□□□□ 0.55
C1orf43-206ENST00000368521 TTC22Q5TAA0 569 aa18.5■□□□□ 0.55
C1orf43-206ENST00000368521 RBM33Q96EV2 1170 aaKnown RBP18.5■□□□□ 0.55
C1orf43-206ENST00000368521 ADAMTS7Q9UKP4 1686 aa18.49■□□□□ 0.55
C1orf43-206ENST00000368521 FKBP5Q13451 457 aaPredicted RBP18.49■□□□□ 0.55
C1orf43-206ENST00000368521 TBC1D9Q6ZT07 1266 aa18.49■□□□□ 0.55
C1orf43-206ENST00000368521 USHBP1Q8N6Y0 703 aa18.48■□□□□ 0.55
C1orf43-206ENST00000368521 ATP8B2P98198 1209 aa18.47■□□□□ 0.55
C1orf43-206ENST00000368521 HDGFL1Q5TGJ6 251 aa18.47■□□□□ 0.55
C1orf43-206ENST00000368521 ANKRD24Q8TF21 1146 aa18.47■□□□□ 0.55
C1orf43-206ENST00000368521 HEG1Q9ULI3 1381 aa18.47■□□□□ 0.55
C1orf43-206ENST00000368521 F6X3S4 739 aa18.46■□□□□ 0.55
C1orf43-206ENST00000368521 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
C1orf43-206ENST00000368521 SLC4A10Q6U841 1118 aa18.46■□□□□ 0.55
C1orf43-206ENST00000368521 GSPT1P15170 499 aaKnown RBP18.46■□□□□ 0.55
C1orf43-206ENST00000368521 RNMTO43148 476 aaKnown RBP18.45■□□□□ 0.54
C1orf43-206ENST00000368521 TEFQ10587 303 aa18.45■□□□□ 0.54
C1orf43-206ENST00000368521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.542e-6■■■■□ 24.3
C1orf43-206ENST00000368521 IBTKQ9P2D0 1353 aaPredicted RBP18.44■□□□□ 0.54
C1orf43-206ENST00000368521 ATF3P18847 181 aa18.44■□□□□ 0.54
C1orf43-206ENST00000368521 C1orf141Q5JVX7 400 aa18.44■□□□□ 0.54
C1orf43-206ENST00000368521 HSCBQ8IWL3 235 aa18.44■□□□□ 0.54
C1orf43-206ENST00000368521 LGR6Q9HBX8 967 aa18.44■□□□□ 0.54
C1orf43-206ENST00000368521 RGPD2P0DJD1 1756 aa18.44■□□□□ 0.54
C1orf43-206ENST00000368521 TMEM94Q12767 1356 aa18.43■□□□□ 0.54
C1orf43-206ENST00000368521 ERBB3P21860 1342 aa18.43■□□□□ 0.54
C1orf43-206ENST00000368521 CADPS2Q86UW7 1296 aa18.43■□□□□ 0.54
C1orf43-206ENST00000368521 LRRC59Q96AG4 307 aaKnown RBP18.43■□□□□ 0.54
C1orf43-206ENST00000368521 BTBD11A6QL63 1104 aa18.42■□□□□ 0.54
C1orf43-206ENST00000368521 KIF2CQ99661 725 aa18.42■□□□□ 0.54
C1orf43-206ENST00000368521 USP44Q9H0E7 712 aa18.42■□□□□ 0.54
C1orf43-206ENST00000368521 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
C1orf43-206ENST00000368521 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
C1orf43-206ENST00000368521 CASC1Q6TDU7 716 aa18.41■□□□□ 0.54
C1orf43-206ENST00000368521 CHMP5Q9NZZ3 219 aa18.41■□□□□ 0.54
C1orf43-206ENST00000368521 SRCIN1Q9C0H9 1055 aa18.4■□□□□ 0.54
C1orf43-206ENST00000368521 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
C1orf43-206ENST00000368521 AOX1Q06278 1338 aa18.4■□□□□ 0.54
C1orf43-206ENST00000368521 SSH3Q8TE77 659 aa18.4■□□□□ 0.54
C1orf43-206ENST00000368521 DBF4Q9UBU7 674 aaPredicted RBP18.4■□□□□ 0.54
C1orf43-206ENST00000368521 CIZ1Q9ULV3 898 aaPredicted RBP18.4■□□□□ 0.54
C1orf43-206ENST00000368521 AXIN2Q9Y2T1 843 aa18.4■□□□□ 0.54
C1orf43-206ENST00000368521 PXDNQ92626 1479 aa18.39■□□□□ 0.54
C1orf43-206ENST00000368521 FRAT2O75474 233 aaPredicted RBP18.39■□□□□ 0.53
C1orf43-206ENST00000368521 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.53
C1orf43-206ENST00000368521 C16orf71Q8IYS4 520 aaPredicted RBP18.39■□□□□ 0.53
C1orf43-206ENST00000368521 LRRCC1Q9C099 1032 aa18.39■□□□□ 0.53
C1orf43-206ENST00000368521 STAP2Q9UGK3 403 aa18.39■□□□□ 0.53
C1orf43-206ENST00000368521 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
C1orf43-206ENST00000368521 RAB11FIP3O75154 756 aa18.38■□□□□ 0.53
C1orf43-206ENST00000368521 SDSP20132 328 aa18.38■□□□□ 0.53
C1orf43-206ENST00000368521 DDIT3P35638 169 aa18.38■□□□□ 0.53
C1orf43-206ENST00000368521 PDE1AP54750 535 aa18.38■□□□□ 0.53
C1orf43-206ENST00000368521 XPCQ01831 940 aaPredicted RBP18.38■□□□□ 0.53
C1orf43-206ENST00000368521 COL18A1P39060 1754 aa18.38■□□□□ 0.53
C1orf43-206ENST00000368521 TNS3Q68CZ2 1445 aa18.38■□□□□ 0.53
C1orf43-206ENST00000368521 CPDO75976 1380 aa18.37■□□□□ 0.53
C1orf43-206ENST00000368521 POLA2Q14181 598 aa18.37■□□□□ 0.53
C1orf43-206ENST00000368521 GSE1Q14687 1217 aa18.37■□□□□ 0.53
C1orf43-206ENST00000368521 IL27Q8NEV9 243 aa18.37■□□□□ 0.53
C1orf43-206ENST00000368521 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
C1orf43-206ENST00000368521 STRCP1A6NGW2 1772 aa18.37■□□□□ 0.53
C1orf43-206ENST00000368521 GIGYF1O75420 1035 aaPredicted RBP18.37■□□□□ 0.53
C1orf43-206ENST00000368521 BEND3Q5T5X7 828 aa18.37■□□□□ 0.53
C1orf43-206ENST00000368521 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
C1orf43-206ENST00000368521 SLKQ9H2G2 1235 aaPredicted RBP18.37■□□□□ 0.53
C1orf43-206ENST00000368521 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
C1orf43-206ENST00000368521 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
C1orf43-206ENST00000368521 ALDH1L1O75891 902 aa18.36■□□□□ 0.53
C1orf43-206ENST00000368521 LMOD2Q6P5Q4 547 aa18.36■□□□□ 0.53
C1orf43-206ENST00000368521 USP26Q9BXU7 913 aa18.36■□□□□ 0.53
C1orf43-206ENST00000368521 ZBTB7CA1YPR0 619 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 REC8O95072 547 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 RABEP1Q15276 862 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 OTUD7AQ8TE49 926 aaPredicted RBP18.35■□□□□ 0.53
C1orf43-206ENST00000368521 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 LRRFIP2Q9Y608 721 aaKnown RBP18.35■□□□□ 0.53
C1orf43-206ENST00000368521 STRCQ7RTU9 1775 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 PNMA6EA0A0J9YXQ4 647 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 SMARCA5O60264 1052 aaPredicted RBP18.35■□□□□ 0.53
C1orf43-206ENST00000368521 MTX1Q13505 466 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 RAPGEF4Q8WZA2 1011 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 HYPKQ9NX55 129 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 SPG7Q9UQ90 795 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 CRYBG1Q9Y4K1 1723 aa18.35■□□□□ 0.53
C1orf43-206ENST00000368521 HSP90AB4PQ58FF6 505 aa18.34■□□□□ 0.53
C1orf43-206ENST00000368521 NECTIN2Q92692 538 aa18.34■□□□□ 0.53
C1orf43-206ENST00000368521 SPATA31A3Q5VYP0 1347 aa18.34■□□□□ 0.53
C1orf43-206ENST00000368521 KCNQ3O43525 872 aa18.33■□□□□ 0.52
C1orf43-206ENST00000368521 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
C1orf43-206ENST00000368521 ADCY9O60503 1353 aa18.33■□□□□ 0.52
C1orf43-206ENST00000368521 MRC1P22897 1456 aa18.32■□□□□ 0.52
C1orf43-206ENST00000368521 PI4KAP2A4QPH2 592 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms