RNA–Protein interactions for RNA: ENST00000368393.7

MUC1-208, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-208ENST00000368393 ITGB4P16144 1822 aa17.41■□□□□ 0.38
MUC1-208ENST00000368393 RREB1Q92766 1687 aa17.41■□□□□ 0.38
MUC1-208ENST00000368393 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
MUC1-208ENST00000368393 MCM10Q7L590 875 aa17.4■□□□□ 0.38
MUC1-208ENST00000368393 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
MUC1-208ENST00000368393 PNNQ9H307 717 aaKnown RBP17.39■□□□□ 0.37
MUC1-208ENST00000368393 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
MUC1-208ENST00000368393 PAPPAQ13219 1627 aa17.39■□□□□ 0.37
MUC1-208ENST00000368393 PALLDQ8WX93 1383 aa17.39■□□□□ 0.37
MUC1-208ENST00000368393 KCNQ4P56696 695 aa17.38■□□□□ 0.37
MUC1-208ENST00000368393 CABP4P57796 275 aa17.38■□□□□ 0.37
MUC1-208ENST00000368393 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
MUC1-208ENST00000368393 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
MUC1-208ENST00000368393 APAF1O14727 1248 aa17.37■□□□□ 0.37
MUC1-208ENST00000368393 LY75O60449 1722 aa17.37■□□□□ 0.37
MUC1-208ENST00000368393 KCPQ6ZWJ8 1503 aa17.37■□□□□ 0.37
MUC1-208ENST00000368393 KCNQ3O43525 872 aa17.36■□□□□ 0.37
MUC1-208ENST00000368393 RIPK4P57078 832 aa17.36■□□□□ 0.37
MUC1-208ENST00000368393 SLC39A6Q13433 755 aa17.36■□□□□ 0.37
MUC1-208ENST00000368393 ITPK1Q13572 414 aa17.36■□□□□ 0.37
MUC1-208ENST00000368393 NUP188Q5SRE5 1749 aa17.35■□□□□ 0.37
MUC1-208ENST00000368393 SIPA1L3O60292 1781 aaPredicted RBP17.35■□□□□ 0.37
MUC1-208ENST00000368393 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
MUC1-208ENST00000368393 SLC27A3Q5K4L6 730 aa17.35■□□□□ 0.37
MUC1-208ENST00000368393 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
MUC1-208ENST00000368393 LOC102724428A0A0B4J2F2 783 aa17.34■□□□□ 0.37
MUC1-208ENST00000368393 SIK1P57059 783 aa17.34■□□□□ 0.37
MUC1-208ENST00000368393 SMARCC1Q92922 1105 aaPredicted RBP17.34■□□□□ 0.37
MUC1-208ENST00000368393 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
MUC1-208ENST00000368393 ZNF827Q17R98 1081 aa17.33■□□□□ 0.36
MUC1-208ENST00000368393 AMIGO3Q86WK7 504 aa17.33■□□□□ 0.36
MUC1-208ENST00000368393 DLG5Q8TDM6 1919 aa17.33■□□□□ 0.36
MUC1-208ENST00000368393 HEG1Q9ULI3 1381 aa17.32■□□□□ 0.36
MUC1-208ENST00000368393 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
MUC1-208ENST00000368393 CCDC27Q2M243 656 aa17.31■□□□□ 0.36
MUC1-208ENST00000368393 ZNF790Q6PG37 636 aa17.31■□□□□ 0.36
MUC1-208ENST00000368393 LINC00116Q8NCU8 138 aa17.31■□□□□ 0.36
MUC1-208ENST00000368393 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
MUC1-208ENST00000368393 ZNF831Q5JPB2 1677 aa17.3■□□□□ 0.36
MUC1-208ENST00000368393 CICQ96RK0 1608 aaPredicted RBP17.3■□□□□ 0.36
MUC1-208ENST00000368393 TAF7Q15545 349 aaPredicted RBP17.3■□□□□ 0.36
MUC1-208ENST00000368393 FAM9BQ8IZU0 186 aa17.3■□□□□ 0.36
MUC1-208ENST00000368393 RTF1Q92541 710 aaKnown RBP17.3■□□□□ 0.36
MUC1-208ENST00000368393 ZNF496Q96IT1 587 aaPredicted RBP17.3■□□□□ 0.36
MUC1-208ENST00000368393 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
MUC1-208ENST00000368393 KAT6BQ8WYB5 2073 aa17.29■□□□□ 0.36
MUC1-208ENST00000368393 SENP3-EIF4A1A0A087X0R7 540 aa17.29■□□□□ 0.36
MUC1-208ENST00000368393 CHL1O00533 1208 aa17.29■□□□□ 0.36
MUC1-208ENST00000368393 TEFQ10587 303 aa17.29■□□□□ 0.36
MUC1-208ENST00000368393 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
MUC1-208ENST00000368393 UBR2Q8IWV8 1755 aa17.29■□□□□ 0.36
MUC1-208ENST00000368393 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
MUC1-208ENST00000368393 ZNF521Q96K83 1311 aa17.28■□□□□ 0.36
MUC1-208ENST00000368393 BTBD11A6QL63 1104 aa17.28■□□□□ 0.36
MUC1-208ENST00000368393 PTCD1O75127 700 aaKnown RBP17.28■□□□□ 0.36
MUC1-208ENST00000368393 NEFMP07197 916 aa17.28■□□□□ 0.36
MUC1-208ENST00000368393 SLC15A2Q16348 729 aa17.28■□□□□ 0.36
MUC1-208ENST00000368393 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
MUC1-208ENST00000368393 WWC1Q8IX03 1113 aa17.27■□□□□ 0.36
MUC1-208ENST00000368393 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.36
MUC1-208ENST00000368393 ATP6V1AP38606 617 aa17.26■□□□□ 0.35
MUC1-208ENST00000368393 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
MUC1-208ENST00000368393 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
MUC1-208ENST00000368393 TJP1Q07157 1748 aa17.25■□□□□ 0.35
MUC1-208ENST00000368393 PRAMEF22A3QJZ6 481 aa17.25■□□□□ 0.35
MUC1-208ENST00000368393 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
MUC1-208ENST00000368393 INTS5Q6P9B9 1019 aaKnown RBP17.25■□□□□ 0.35
MUC1-208ENST00000368393 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
MUC1-208ENST00000368393 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
MUC1-208ENST00000368393 C5P01031 1676 aa17.24■□□□□ 0.35
MUC1-208ENST00000368393 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
MUC1-208ENST00000368393 R3HDM1Q15032 1099 aaKnown RBP17.24■□□□□ 0.35
MUC1-208ENST00000368393 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
MUC1-208ENST00000368393 SPINK5Q9NQ38 1064 aaPredicted RBP17.24■□□□□ 0.35
MUC1-208ENST00000368393 PNPLA7Q6ZV29 1317 aa17.23■□□□□ 0.35
MUC1-208ENST00000368393 CNTNAP4Q9C0A0 1308 aa17.23■□□□□ 0.35
MUC1-208ENST00000368393 KDM3BQ7LBC6 1761 aa17.23■□□□□ 0.35
MUC1-208ENST00000368393 RC3H1Q5TC82 1133 aaKnown RBP17.23■□□□□ 0.35
MUC1-208ENST00000368393 TAF1LQ8IZX4 1826 aa17.23■□□□□ 0.35
MUC1-208ENST00000368393 C4BP0C0L5 1744 aa17.22■□□□□ 0.35
MUC1-208ENST00000368393 PSDA5PKW4 1024 aaPredicted RBP17.22■□□□□ 0.35
MUC1-208ENST00000368393 CFAP44Q96MT7 982 aa17.22■□□□□ 0.35
MUC1-208ENST00000368393 USP16Q9Y5T5 823 aa17.22■□□□□ 0.35
MUC1-208ENST00000368393 COL5A3P25940 1745 aaPredicted RBP17.21■□□□□ 0.35
MUC1-208ENST00000368393 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
MUC1-208ENST00000368393 FMNL2Q96PY5 1086 aa17.21■□□□□ 0.35
MUC1-208ENST00000368393 MYH14Q7Z406 1995 aaKnown RBP17.2■□□□□ 0.34
MUC1-208ENST00000368393 CRKLP46109 303 aaKnown RBP17.2■□□□□ 0.34
MUC1-208ENST00000368393 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
MUC1-208ENST00000368393 NBPF14Q5TI25 921 aa17.2■□□□□ 0.34
MUC1-208ENST00000368393 MBIPQ9NS73 344 aa17.2■□□□□ 0.34
MUC1-208ENST00000368393 IFT57Q9NWB7 429 aa17.2■□□□□ 0.34
MUC1-208ENST00000368393 STK32BQ9NY57 414 aa17.2■□□□□ 0.34
MUC1-208ENST00000368393 IL16Q14005 1332 aa17.2■□□□□ 0.34
MUC1-208ENST00000368393 COL23A1Q86Y22 540 aaPredicted RBP17.19■□□□□ 0.34
MUC1-208ENST00000368393 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
MUC1-208ENST00000368393 TSPYL4Q9UJ04 414 aa17.19■□□□□ 0.34
MUC1-208ENST00000368393 CASZ1Q86V15 1759 aa17.19■□□□□ 0.34
MUC1-208ENST00000368393 RPS6KA4O75676 772 aa17.18■□□□□ 0.34
MUC1-208ENST00000368393 LRP10Q7Z4F1 713 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms