RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 KIF21BO75037 1637 aa8.05□□□□□ -1.12
ECHDC1-204ENST00000368292 ADH1AP07327 375 aa8.05□□□□□ -1.12
ECHDC1-204ENST00000368292 MAP7D1Q3KQU3 841 aa8.05□□□□□ -1.12
ECHDC1-204ENST00000368292 TBC1D9Q6ZT07 1266 aa8.05□□□□□ -1.12
ECHDC1-204ENST00000368292 TSEN34Q9BSV6 310 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-204ENST00000368292 OSBPL3Q9H4L5 887 aa8.05□□□□□ -1.12
ECHDC1-204ENST00000368292 PTPRMP28827 1452 aa8.05□□□□□ -1.12
ECHDC1-204ENST00000368292 GLI2P10070 1586 aa8.05□□□□□ -1.12
ECHDC1-204ENST00000368292 CUX1P39880 1505 aa8.04□□□□□ -1.12
ECHDC1-204ENST00000368292 SKIP12755 728 aa8.04□□□□□ -1.12
ECHDC1-204ENST00000368292 CALR3Q96L12 384 aaKnown RBP8.04□□□□□ -1.12
ECHDC1-204ENST00000368292 SNRPBP14678 240 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-204ENST00000368292 SCARF1Q14162 830 aa8.03□□□□□ -1.12
ECHDC1-204ENST00000368292 C6orf118Q5T5N4 469 aa8.03□□□□□ -1.12
ECHDC1-204ENST00000368292 TRIM47Q96LD4 638 aa8.03□□□□□ -1.12
ECHDC1-204ENST00000368292 ADAMTSL3P82987 1691 aa8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 SPINT1O43278 529 aa8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 PTGIRP43119 386 aa8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 RELBQ01201 579 aa8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 USP4Q13107 963 aa8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 OXLD1Q5BKU9 147 aa8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 ZNF787Q6DD87 383 aa8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 TRIM52Q96A61 297 aa8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 ZNF395Q9H8N7 513 aaPredicted RBP8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 SENP2Q9HC62 589 aa8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 MAP3K4Q9Y6R4 1608 aa8.02□□□□□ -1.13
ECHDC1-204ENST00000368292 USP17L5A8MUK1 530 aa8.01□□□□□ -1.13
ECHDC1-204ENST00000368292 C11orf95C9JLR9 678 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-204ENST00000368292 ATP5J2-PTCD1G3V325 749 aa8.01□□□□□ -1.13
ECHDC1-204ENST00000368292 ATP9BO43861 1147 aa8.01□□□□□ -1.13
ECHDC1-204ENST00000368292 UPP2O95045 317 aa8.01□□□□□ -1.13
ECHDC1-204ENST00000368292 BMP2P12643 396 aa8.01□□□□□ -1.13
ECHDC1-204ENST00000368292 DEPDC4Q8N2C3 294 aa8.01□□□□□ -1.13
ECHDC1-204ENST00000368292 MYCP01106 439 aaPredicted RBP8□□□□□ -1.13
ECHDC1-204ENST00000368292 NCOA4Q13772 614 aa8□□□□□ -1.13
ECHDC1-204ENST00000368292 CYP2U1Q7Z449 544 aa8□□□□□ -1.13
ECHDC1-204ENST00000368292 PLEKHM2Q8IWE5 1019 aa8□□□□□ -1.13
ECHDC1-204ENST00000368292 KIFC2Q96AC6 838 aa8□□□□□ -1.13
ECHDC1-204ENST00000368292 PPP1R12CQ9BZL4 782 aa8□□□□□ -1.13
ECHDC1-204ENST00000368292 TFIP11Q9UBB9 837 aaKnown RBP8□□□□□ -1.13
ECHDC1-204ENST00000368292 SOS2Q07890 1332 aaPredicted RBP8□□□□□ -1.13
ECHDC1-204ENST00000368292 A0A1W2PRU2 124 aa7.99□□□□□ -1.13
ECHDC1-204ENST00000368292 PALM3A6NDB9 673 aaPredicted RBP7.99□□□□□ -1.13
ECHDC1-204ENST00000368292 LZTS3O60299 673 aaPredicted RBP7.99□□□□□ -1.13
ECHDC1-204ENST00000368292 INSM2Q96T92 566 aaPredicted RBP7.99□□□□□ -1.13
ECHDC1-204ENST00000368292 SERPINA10Q9UK55 444 aa7.99□□□□□ -1.13
ECHDC1-204ENST00000368292 USP17L3A6NCW0 530 aa7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 USP17L4A6NCW7 530 aa7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 STAU1O95793 577 aaKnown RBP7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 CTSOP43234 321 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 HSPA2P54652 639 aa7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 USP17L2Q6R6M4 530 aa7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 USP17L1Q7RTZ2 530 aa7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 PCDHGA11Q9Y5H2 935 aa7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 MAFBQ9Y5Q3 323 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 RUSC2Q8N2Y8 1516 aa7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 ABCA10Q8WWZ4 1543 aa7.98□□□□□ -1.13
ECHDC1-204ENST00000368292 SOBPA7XYQ1 873 aa7.97□□□□□ -1.13
ECHDC1-204ENST00000368292 GNRH1P01148 92 aa7.97□□□□□ -1.13
ECHDC1-204ENST00000368292 EML3Q32P44 896 aa7.97□□□□□ -1.13
ECHDC1-204ENST00000368292 SIRT1Q96EB6 747 aa7.97□□□□□ -1.13
ECHDC1-204ENST00000368292 CCDC97Q96F63 343 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-204ENST00000368292 ESF1Q9H501 851 aaKnown RBP7.97□□□□□ -1.13
ECHDC1-204ENST00000368292 ARHGEF10LQ9HCE6 1279 aa7.97□□□□□ -1.13
ECHDC1-204ENST00000368292 ASXL2Q76L83 1435 aa7.96□□□□□ -1.13
ECHDC1-204ENST00000368292 TTLL8A6PVC2 850 aa7.96□□□□□ -1.14
ECHDC1-204ENST00000368292 CFAP70Q5T0N1 1121 aa7.96□□□□□ -1.14
ECHDC1-204ENST00000368292 FOXD4L5Q5VV16 416 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-204ENST00000368292 RAB6BQ9NRW1 208 aa7.96□□□□□ -1.14
ECHDC1-204ENST00000368292 DNMT3LQ9UJW3 386 aa7.96□□□□□ -1.14
ECHDC1-204ENST00000368292 NOD1Q9Y239 953 aa7.96□□□□□ -1.14
ECHDC1-204ENST00000368292 HRH3Q9Y5N1 445 aa7.96□□□□□ -1.14
ECHDC1-204ENST00000368292 IL2RAP01589 272 aa7.95□□□□□ -1.14
ECHDC1-204ENST00000368292 SCNN1DP51172 638 aa7.95□□□□□ -1.14
ECHDC1-204ENST00000368292 CLN3Q13286 438 aa7.95□□□□□ -1.14
ECHDC1-204ENST00000368292 ETNK1Q9HBU6 452 aa7.95□□□□□ -1.14
ECHDC1-204ENST00000368292 MADDQ8WXG6 1647 aa7.95□□□□□ -1.14
ECHDC1-204ENST00000368292 ZBTB7BO15156 539 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-204ENST00000368292 RNF144AP50876 292 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-204ENST00000368292 GTF2IP78347 998 aa7.94□□□□□ -1.14
ECHDC1-204ENST00000368292 RNF217Q8TC41 542 aa7.94□□□□□ -1.14
ECHDC1-204ENST00000368292 XAGE2Q96GT9 111 aa7.94□□□□□ -1.14
ECHDC1-204ENST00000368292 POLMQ9NP87 494 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-204ENST00000368292 CUL7Q14999 1698 aa7.94□□□□□ -1.14
ECHDC1-204ENST00000368292 TEX14Q8IWB6 1497 aa7.94□□□□□ -1.14
ECHDC1-204ENST00000368292 FIGNL2A6NMB9 653 aa7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 TMEM229AB2RXF0 380 aa7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 MEN1O00255 615 aa7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 LMOD1P29536 600 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 CLDN10P78369 228 aa7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 KANK4Q5T7N3 995 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 CNKSR1Q969H4 720 aa7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 ESYT1Q9BSJ8 1104 aa7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 MKRN1Q9UHC7 482 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 FHAD1B1AJZ9 1412 aa7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 PLB1Q6P1J6 1458 aa7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 EPRSP07814 1512 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 ABCC2Q92887 1545 aa7.93□□□□□ -1.14
ECHDC1-204ENST00000368292 MAN1A2O60476 641 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms