RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 STK32BQ9NY57 414 aa29.92■■■□□ 2.38
ECHDC1-203ENST00000368291 MAP3K5Q99683 1374 aa29.92■■■□□ 2.38
ECHDC1-203ENST00000368291 AKT1S1Q96B36 256 aa29.91■■■□□ 2.38
ECHDC1-203ENST00000368291 SIPA1L3O60292 1781 aaPredicted RBP29.91■■■□□ 2.38
ECHDC1-203ENST00000368291 PLEKHF1Q96S99 279 aa29.9■■■□□ 2.38
ECHDC1-203ENST00000368291 SLC52A2Q9HAB3 445 aa29.9■■■□□ 2.38
ECHDC1-203ENST00000368291 ZNF831Q5JPB2 1677 aa29.9■■■□□ 2.38
ECHDC1-203ENST00000368291 GNAT3A8MTJ3 354 aa29.9■■■□□ 2.38
ECHDC1-203ENST00000368291 IL17REQ8NFR9 667 aa29.89■■■□□ 2.37
ECHDC1-203ENST00000368291 PDGFDQ9GZP0 370 aaPredicted RBP29.89■■■□□ 2.37
ECHDC1-203ENST00000368291 LRP5O75197 1615 aa29.88■■■□□ 2.37
ECHDC1-203ENST00000368291 LOC102724428A0A0B4J2F2 783 aa29.88■■■□□ 2.37
ECHDC1-203ENST00000368291 SIK1P57059 783 aa29.88■■■□□ 2.37
ECHDC1-203ENST00000368291 C4BP0C0L5 1744 aa29.87■■■□□ 2.37
ECHDC1-203ENST00000368291 SRCAPQ6ZRS2 3230 aa29.85■■■□□ 2.37
ECHDC1-203ENST00000368291 SLC4A9Q96Q91 983 aa29.85■■■□□ 2.37
ECHDC1-203ENST00000368291 CEMIPQ8WUJ3 1361 aa29.84■■■□□ 2.37
ECHDC1-203ENST00000368291 COL5A3P25940 1745 aaPredicted RBP29.83■■■□□ 2.37
ECHDC1-203ENST00000368291 ITPK1Q13572 414 aa29.83■■■□□ 2.37
ECHDC1-203ENST00000368291 UBR3Q6ZT12 1888 aa29.82■■■□□ 2.37
ECHDC1-203ENST00000368291 UBR2Q8IWV8 1755 aa29.82■■■□□ 2.36
ECHDC1-203ENST00000368291 ATP6V1AP38606 617 aa29.8■■■□□ 2.36
ECHDC1-203ENST00000368291 CICQ96RK0 1608 aaPredicted RBP29.8■■■□□ 2.36
ECHDC1-203ENST00000368291 TJP1Q07157 1748 aa29.79■■■□□ 2.36
ECHDC1-203ENST00000368291 PNPLA7Q6ZV29 1317 aa29.79■■■□□ 2.36
ECHDC1-203ENST00000368291 LINC00116Q8NCU8 138 aa29.79■■■□□ 2.36
ECHDC1-203ENST00000368291 RBM42Q9BTD8 480 aaKnown RBP29.79■■■□□ 2.36
ECHDC1-203ENST00000368291 SLC39A6Q13433 755 aa29.78■■■□□ 2.36
ECHDC1-203ENST00000368291 CCDC184Q52MB2 194 aa29.78■■■□□ 2.36
ECHDC1-203ENST00000368291 PNNQ9H307 717 aaKnown RBP29.78■■■□□ 2.36
ECHDC1-203ENST00000368291 MYH14Q7Z406 1995 aaKnown RBP29.78■■■□□ 2.36
ECHDC1-203ENST00000368291 KCPQ6ZWJ8 1503 aa29.78■■■□□ 2.36
ECHDC1-203ENST00000368291 PTCD1O75127 700 aaKnown RBP29.77■■■□□ 2.36
ECHDC1-203ENST00000368291 TFCP2L1Q9NZI6 479 aa29.77■■■□□ 2.36
ECHDC1-203ENST00000368291 HTATSF1O43719 755 aaKnown RBP29.76■■■□□ 2.35
ECHDC1-203ENST00000368291 NEFMP07197 916 aa29.76■■■□□ 2.35
ECHDC1-203ENST00000368291 TEFQ10587 303 aa29.76■■■□□ 2.35
ECHDC1-203ENST00000368291 DCTN1Q14203 1278 aa29.76■■■□□ 2.35
ECHDC1-203ENST00000368291 MCM10Q7L590 875 aa29.76■■■□□ 2.35
ECHDC1-203ENST00000368291 ADAMTS8Q9UP79 889 aa29.76■■■□□ 2.35
ECHDC1-203ENST00000368291 ANP32CO43423 234 aa29.75■■■□□ 2.35
ECHDC1-203ENST00000368291 WDR43Q15061 677 aaKnown RBP eCLIP29.75■■■□□ 2.35
ECHDC1-203ENST00000368291 NFE2L2Q16236 605 aa29.75■■■□□ 2.35
ECHDC1-203ENST00000368291 HMGB2P26583 209 aaKnown RBP29.74■■■□□ 2.35
ECHDC1-203ENST00000368291 AMIGO3Q86WK7 504 aa29.74■■■□□ 2.35
ECHDC1-203ENST00000368291 MAPK8IP3Q9UPT6 1336 aa29.73■■■□□ 2.35
ECHDC1-203ENST00000368291 RTF1Q92541 710 aaKnown RBP29.73■■■□□ 2.35
ECHDC1-203ENST00000368291 COL24A1Q17RW2 1714 aa29.72■■■□□ 2.35
ECHDC1-203ENST00000368291 ZBTB7AO95365 584 aa29.72■■■□□ 2.35
ECHDC1-203ENST00000368291 CCDC146Q8IYE0 955 aa29.71■■■□□ 2.35
ECHDC1-203ENST00000368291 COL23A1Q86Y22 540 aaPredicted RBP29.7■■■□□ 2.35
ECHDC1-203ENST00000368291 SPON1Q9HCB6 807 aa29.7■■■□□ 2.35
ECHDC1-203ENST00000368291 SMIM5Q71RC9 77 aa29.69■■■□□ 2.34
ECHDC1-203ENST00000368291 AK7Q96M32 723 aa29.69■■■□□ 2.34
ECHDC1-203ENST00000368291 ZNF790Q6PG37 636 aa29.67■■■□□ 2.34
ECHDC1-203ENST00000368291 RUNDC1Q96C34 613 aa29.67■■■□□ 2.34
ECHDC1-203ENST00000368291 MTFR1LQ9H019 292 aa29.67■■■□□ 2.34
ECHDC1-203ENST00000368291 ATF5Q9Y2D1 282 aaPredicted RBP29.67■■■□□ 2.34
ECHDC1-203ENST00000368291 TMPOP42166 694 aaKnown RBP29.66■■■□□ 2.34
ECHDC1-203ENST00000368291 KCNQ3O43525 872 aa29.65■■■□□ 2.34
ECHDC1-203ENST00000368291 PTGER2P43116 358 aa29.65■■■□□ 2.34
ECHDC1-203ENST00000368291 RC3H1Q5TC82 1133 aaKnown RBP29.65■■■□□ 2.34
ECHDC1-203ENST00000368291 CNTNAP4Q9C0A0 1308 aa29.65■■■□□ 2.34
ECHDC1-203ENST00000368291 BTBD11A6QL63 1104 aa29.64■■■□□ 2.34
ECHDC1-203ENST00000368291 DNAJC10Q8IXB1 793 aa29.64■■■□□ 2.34
ECHDC1-203ENST00000368291 SLC16A10Q8TF71 515 aa29.64■■■□□ 2.34
ECHDC1-203ENST00000368291 ZNF496Q96IT1 587 aaPredicted RBP29.64■■■□□ 2.34
ECHDC1-203ENST00000368291 KDM3BQ7LBC6 1761 aa29.64■■■□□ 2.34
ECHDC1-203ENST00000368291 GNPATO15228 680 aa29.64■■■□□ 2.33
ECHDC1-203ENST00000368291 RIPK4P57078 832 aa29.64■■■□□ 2.33
ECHDC1-203ENST00000368291 TTC5Q8N0Z6 440 aa29.64■■■□□ 2.33
ECHDC1-203ENST00000368291 SGIP1Q9BQI5 828 aa29.64■■■□□ 2.33
ECHDC1-203ENST00000368291 THUMPD2Q9BTF0 503 aaKnown RBP29.64■■■□□ 2.33
ECHDC1-203ENST00000368291 SSFA2P28290 1259 aa29.63■■■□□ 2.33
ECHDC1-203ENST00000368291 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.62■■■□□ 2.33
ECHDC1-203ENST00000368291 CRKLP46109 303 aaKnown RBP29.62■■■□□ 2.33
ECHDC1-203ENST00000368291 VSIG10Q8N0Z9 540 aa29.62■■■□□ 2.33
ECHDC1-203ENST00000368291 FLAD1Q8NFF5 587 aa29.62■■■□□ 2.33
ECHDC1-203ENST00000368291 RRP7AQ9Y3A4 280 aaKnown RBP29.62■■■□□ 2.33
ECHDC1-203ENST00000368291 C4AP0C0L4 1744 aa29.61■■■□□ 2.33
ECHDC1-203ENST00000368291 PHF14O94880 888 aa29.61■■■□□ 2.33
ECHDC1-203ENST00000368291 HEG1Q9ULI3 1381 aa29.6■■■□□ 2.33
ECHDC1-203ENST00000368291 TAF7Q15545 349 aaPredicted RBP29.6■■■□□ 2.33
ECHDC1-203ENST00000368291 PNISRQ8TF01 805 aaKnown RBP29.6■■■□□ 2.33
ECHDC1-203ENST00000368291 MRS2Q9HD23 443 aa29.6■■■□□ 2.33
ECHDC1-203ENST00000368291 MSH5O43196 834 aa29.59■■■□□ 2.33
ECHDC1-203ENST00000368291 CYP19A1P11511 503 aaPredicted RBP29.59■■■□□ 2.33
ECHDC1-203ENST00000368291 INTS5Q6P9B9 1019 aaKnown RBP29.59■■■□□ 2.33
ECHDC1-203ENST00000368291 RPS6KA4O75676 772 aa29.58■■■□□ 2.33
ECHDC1-203ENST00000368291 MIS18AQ9NYP9 233 aa29.57■■■□□ 2.32
ECHDC1-203ENST00000368291 RTCBQ9Y3I0 505 aaKnown RBP29.57■■■□□ 2.32
ECHDC1-203ENST00000368291 NEUROD2Q15784 382 aa29.56■■■□□ 2.32
ECHDC1-203ENST00000368291 FMNL2Q96PY5 1086 aa29.56■■■□□ 2.32
ECHDC1-203ENST00000368291 TRIM35Q9UPQ4 493 aa29.56■■■□□ 2.32
ECHDC1-203ENST00000368291 CCDC87Q9NVE4 849 aa29.54■■■□□ 2.32
ECHDC1-203ENST00000368291 LMOD3Q0VAK6 560 aa29.53■■■□□ 2.32
ECHDC1-203ENST00000368291 ARHGEF1Q92888 912 aaKnown RBP29.52■■■□□ 2.32
ECHDC1-203ENST00000368291 APAF1O14727 1248 aa29.52■■■□□ 2.32
ECHDC1-203ENST00000368291 TRAPPC3LQ5T215 181 aa29.52■■■□□ 2.32
ECHDC1-203ENST00000368291 MSL1Q68DK7 614 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms