RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 TMPOP42166 694 aaKnown RBP16.75■□□□□ 0.27
LMX1A-203ENST00000367893 SLC16A10Q8TF71 515 aa16.75■□□□□ 0.27
LMX1A-203ENST00000367893 ARXQ96QS3 562 aa16.75■□□□□ 0.27
LMX1A-203ENST00000367893 HNRNPUQ00839 825 aaKnown RBP eCLIP16.74■□□□□ 0.27
LMX1A-203ENST00000367893 NFE2L2Q16236 605 aa16.74■□□□□ 0.27
LMX1A-203ENST00000367893 AMOTQ4VCS5 1084 aa16.74■□□□□ 0.27
LMX1A-203ENST00000367893 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
LMX1A-203ENST00000367893 CCDC27Q2M243 656 aa16.73■□□□□ 0.27
LMX1A-203ENST00000367893 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
LMX1A-203ENST00000367893 PALLDQ8WX93 1383 aa16.73■□□□□ 0.27
LMX1A-203ENST00000367893 YY1P25490 414 aa16.72■□□□□ 0.27
LMX1A-203ENST00000367893 PLEKHO1Q53GL0 409 aaPredicted RBP16.72■□□□□ 0.27
LMX1A-203ENST00000367893 GAS2L2Q8NHY3 880 aa16.72■□□□□ 0.27
LMX1A-203ENST00000367893 QSER1Q2KHR3 1735 aa16.72■□□□□ 0.27
LMX1A-203ENST00000367893 TOGARAM1Q9Y4F4 1720 aa16.72■□□□□ 0.27
LMX1A-203ENST00000367893 MPRIPQ6WCQ1 1025 aa16.71■□□□□ 0.27
LMX1A-203ENST00000367893 PIGBQ92521 554 aa16.71■□□□□ 0.27
LMX1A-203ENST00000367893 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.27
LMX1A-203ENST00000367893 ZNF521Q96K83 1311 aa16.71■□□□□ 0.27
LMX1A-203ENST00000367893 ADAMTS7Q9UKP4 1686 aa16.71■□□□□ 0.27
LMX1A-203ENST00000367893 VIRMAQ69YN4 1812 aaKnown RBP16.71■□□□□ 0.26
LMX1A-203ENST00000367893 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
LMX1A-203ENST00000367893 TRIM35Q9UPQ4 493 aa16.7■□□□□ 0.26
LMX1A-203ENST00000367893 SPG7Q9UQ90 795 aa16.7■□□□□ 0.26
LMX1A-203ENST00000367893 GOLGB1Q14789 3259 aaKnown RBP16.7■□□□□ 0.26
LMX1A-203ENST00000367893 RIPK4P57078 832 aa16.7■□□□□ 0.26
LMX1A-203ENST00000367893 YTHDC1Q96MU7 727 aaKnown RBP16.7■□□□□ 0.26
LMX1A-203ENST00000367893 RRP7AQ9Y3A4 280 aaKnown RBP16.7■□□□□ 0.26
LMX1A-203ENST00000367893 COL24A1Q17RW2 1714 aa16.69■□□□□ 0.26
LMX1A-203ENST00000367893 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
LMX1A-203ENST00000367893 HTATSF1O43719 755 aaKnown RBP16.69■□□□□ 0.26
LMX1A-203ENST00000367893 PHKG2P15735 406 aa16.69■□□□□ 0.26
LMX1A-203ENST00000367893 WWC1Q8IX03 1113 aa16.69■□□□□ 0.26
LMX1A-203ENST00000367893 TUBGCP6Q96RT7 1819 aa16.69■□□□□ 0.26
LMX1A-203ENST00000367893 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
LMX1A-203ENST00000367893 AKAP4Q5JQC9 854 aa16.68■□□□□ 0.26
LMX1A-203ENST00000367893 AMIGO3Q86WK7 504 aa16.68■□□□□ 0.26
LMX1A-203ENST00000367893 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
LMX1A-203ENST00000367893 KAT6BQ8WYB5 2073 aa16.67■□□□□ 0.26
LMX1A-203ENST00000367893 SENP3-EIF4A1A0A087X0R7 540 aa16.67■□□□□ 0.26
LMX1A-203ENST00000367893 LMOD3Q0VAK6 560 aa16.67■□□□□ 0.26
LMX1A-203ENST00000367893 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
LMX1A-203ENST00000367893 IFNL2Q8IZJ0 200 aa16.67■□□□□ 0.26
LMX1A-203ENST00000367893 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
LMX1A-203ENST00000367893 GNAT3A8MTJ3 354 aa16.66■□□□□ 0.26
LMX1A-203ENST00000367893 POLD1P28340 1107 aa16.66■□□□□ 0.26
LMX1A-203ENST00000367893 WDR63Q8IWG1 891 aa16.65■□□□□ 0.26
LMX1A-203ENST00000367893 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
LMX1A-203ENST00000367893 SALL2Q9Y467 1007 aaPredicted RBP16.65■□□□□ 0.26
LMX1A-203ENST00000367893 CEMIPQ8WUJ3 1361 aa16.64■□□□□ 0.25
LMX1A-203ENST00000367893 TMOD3Q9NYL9 352 aa16.64■□□□□ 0.25
LMX1A-203ENST00000367893 C5P01031 1676 aa16.63■□□□□ 0.25
LMX1A-203ENST00000367893 SIPA1L3O60292 1781 aaPredicted RBP16.63■□□□□ 0.25
LMX1A-203ENST00000367893 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
LMX1A-203ENST00000367893 SIK1P57059 783 aa16.63■□□□□ 0.25
LMX1A-203ENST00000367893 C1orf141Q5JVX7 400 aa16.63■□□□□ 0.25
LMX1A-203ENST00000367893 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
LMX1A-203ENST00000367893 LINC00116Q8NCU8 138 aa16.63■□□□□ 0.25
LMX1A-203ENST00000367893 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
LMX1A-203ENST00000367893 NLGN2Q8NFZ4 835 aa16.63■□□□□ 0.25
LMX1A-203ENST00000367893 IL16Q14005 1332 aa16.62■□□□□ 0.25
LMX1A-203ENST00000367893 HSP90AB1P08238 724 aaKnown RBP16.62■□□□□ 0.25
LMX1A-203ENST00000367893 HMGB2P26583 209 aaKnown RBP16.62■□□□□ 0.25
LMX1A-203ENST00000367893 ITPK1Q13572 414 aa16.62■□□□□ 0.25
LMX1A-203ENST00000367893 SMIM5Q71RC9 77 aa16.62■□□□□ 0.25
LMX1A-203ENST00000367893 FLAD1Q8NFF5 587 aa16.62■□□□□ 0.25
LMX1A-203ENST00000367893 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
LMX1A-203ENST00000367893 KDM6AO15550 1401 aaPredicted RBP16.62■□□□□ 0.25
LMX1A-203ENST00000367893 MSH5O43196 834 aa16.61■□□□□ 0.25
LMX1A-203ENST00000367893 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
LMX1A-203ENST00000367893 DCAF5Q96JK2 942 aa16.61■□□□□ 0.25
LMX1A-203ENST00000367893 C4BP0C0L5 1744 aa16.61■□□□□ 0.25
LMX1A-203ENST00000367893 ITGB4P16144 1822 aa16.61■□□□□ 0.25
LMX1A-203ENST00000367893 MRC1P22897 1456 aa16.6■□□□□ 0.25
LMX1A-203ENST00000367893 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
LMX1A-203ENST00000367893 CALD1Q05682 793 aaKnown RBP16.6■□□□□ 0.25
LMX1A-203ENST00000367893 GOLGA2Q08379 1002 aa16.6■□□□□ 0.25
LMX1A-203ENST00000367893 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
LMX1A-203ENST00000367893 MCM10Q7L590 875 aa16.6■□□□□ 0.25
LMX1A-203ENST00000367893 AK7Q96M32 723 aa16.6■□□□□ 0.25
LMX1A-203ENST00000367893 SLC4A9Q96Q91 983 aa16.6■□□□□ 0.25
LMX1A-203ENST00000367893 ERVV-2B6SEH9 535 aa16.59■□□□□ 0.25
LMX1A-203ENST00000367893 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
LMX1A-203ENST00000367893 KLHL34Q8N239 644 aa16.59■□□□□ 0.25
LMX1A-203ENST00000367893 THUMPD2Q9BTF0 503 aaKnown RBP16.59■□□□□ 0.25
LMX1A-203ENST00000367893 LGR6Q9HBX8 967 aa16.59■□□□□ 0.25
LMX1A-203ENST00000367893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.58■□□□□ 0.24
LMX1A-203ENST00000367893 ZNF853P0CG23 659 aa16.58■□□□□ 0.24
LMX1A-203ENST00000367893 SSFA2P28290 1259 aa16.58■□□□□ 0.24
LMX1A-203ENST00000367893 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
LMX1A-203ENST00000367893 ZNF784Q8NCA9 323 aaPredicted RBP16.58■□□□□ 0.24
LMX1A-203ENST00000367893 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
LMX1A-203ENST00000367893 TAF1LQ8IZX4 1826 aa16.58■□□□□ 0.24
LMX1A-203ENST00000367893 E9PSI1 815 aa16.56■□□□□ 0.24
LMX1A-203ENST00000367893 PHF14O94880 888 aa16.56■□□□□ 0.24
LMX1A-203ENST00000367893 ATP6V1AP38606 617 aa16.56■□□□□ 0.24
LMX1A-203ENST00000367893 GPR162Q16538 588 aa16.56■□□□□ 0.24
LMX1A-203ENST00000367893 CDCA7LQ96GN5 454 aa16.56■□□□□ 0.24
LMX1A-203ENST00000367893 CFAP44Q96MT7 982 aa16.56■□□□□ 0.24
LMX1A-203ENST00000367893 IFT57Q9NWB7 429 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms