RNA–Protein interactions for RNA: ENST00000367165.3

CLDN20-201, Transcript of claudin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN20, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20-201ENST00000367165 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
CLDN20-201ENST00000367165 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
CLDN20-201ENST00000367165 ARXQ96QS3 562 aa13.11□□□□□ -0.31
CLDN20-201ENST00000367165 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
CLDN20-201ENST00000367165 BTAF1O14981 1849 aa13.11□□□□□ -0.31
CLDN20-201ENST00000367165 FAM208AQ9UK61 1670 aaKnown RBP13.1□□□□□ -0.31
CLDN20-201ENST00000367165 OCEL1Q9H607 264 aa13.1□□□□□ -0.31
CLDN20-201ENST00000367165 SLC27A3Q5K4L6 730 aa13.09□□□□□ -0.31
CLDN20-201ENST00000367165 ZNF784Q8NCA9 323 aaPredicted RBP13.09□□□□□ -0.31
CLDN20-201ENST00000367165 IP6K1Q92551 441 aa13.09□□□□□ -0.31
CLDN20-201ENST00000367165 LRRC4BQ9NT99 713 aa13.09□□□□□ -0.31
CLDN20-201ENST00000367165 TONSLQ96HA7 1378 aa13.08□□□□□ -0.31
CLDN20-201ENST00000367165 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
CLDN20-201ENST00000367165 MKRN3Q13064 507 aaKnown RBP13.08□□□□□ -0.32
CLDN20-201ENST00000367165 UTRNP46939 3433 aa13.08□□□□□ -0.32
CLDN20-201ENST00000367165 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
CLDN20-201ENST00000367165 SLC16A10Q8TF71 515 aa13.07□□□□□ -0.32
CLDN20-201ENST00000367165 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
CLDN20-201ENST00000367165 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
CLDN20-201ENST00000367165 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
CLDN20-201ENST00000367165 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
CLDN20-201ENST00000367165 COG3Q96JB2 828 aa13.06□□□□□ -0.32
CLDN20-201ENST00000367165 MAP3K19Q56UN5 1328 aa13.06□□□□□ -0.32
CLDN20-201ENST00000367165 POLD1P28340 1107 aa13.05□□□□□ -0.32
CLDN20-201ENST00000367165 HOXC9P31274 260 aa13.05□□□□□ -0.32
CLDN20-201ENST00000367165 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
CLDN20-201ENST00000367165 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
CLDN20-201ENST00000367165 NSD2O96028 1365 aa13.05□□□□□ -0.32
CLDN20-201ENST00000367165 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
CLDN20-201ENST00000367165 MEGF6O75095 1541 aa13.04□□□□□ -0.32
CLDN20-201ENST00000367165 AMPHP49418 695 aa13.04□□□□□ -0.32
CLDN20-201ENST00000367165 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
CLDN20-201ENST00000367165 TESK2Q96S53 571 aa13.04□□□□□ -0.32
CLDN20-201ENST00000367165 DOT1LQ8TEK3 1739 aa13.03□□□□□ -0.32
CLDN20-201ENST00000367165 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
CLDN20-201ENST00000367165 SLC24A1O60721 1099 aa13.03□□□□□ -0.32
CLDN20-201ENST00000367165 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
CLDN20-201ENST00000367165 EMP3P54852 163 aa13.03□□□□□ -0.32
CLDN20-201ENST00000367165 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
CLDN20-201ENST00000367165 TFCP2L1Q9NZI6 479 aa13.03□□□□□ -0.32
CLDN20-201ENST00000367165 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
CLDN20-201ENST00000367165 GPR162Q16538 588 aa13.02□□□□□ -0.33
CLDN20-201ENST00000367165 ZCRB1Q8TBF4 217 aaKnown RBP13.02□□□□□ -0.33
CLDN20-201ENST00000367165 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
CLDN20-201ENST00000367165 ST20-MTHFSA0A0A6YYL1 179 aa13.01□□□□□ -0.33
CLDN20-201ENST00000367165 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
CLDN20-201ENST00000367165 COL24A1Q17RW2 1714 aa13.01□□□□□ -0.33
CLDN20-201ENST00000367165 SHANK3Q9BYB0 1731 aa13□□□□□ -0.33
CLDN20-201ENST00000367165 USP47Q96K76 1375 aa13□□□□□ -0.33
CLDN20-201ENST00000367165 KCNQ4P56696 695 aa13□□□□□ -0.33
CLDN20-201ENST00000367165 PDCD7Q8N8D1 485 aaKnown RBP13□□□□□ -0.33
CLDN20-201ENST00000367165 CCNL1Q9UK58 526 aaPredicted RBP13□□□□□ -0.33
CLDN20-201ENST00000367165 LY75O60449 1722 aa12.99□□□□□ -0.33
CLDN20-201ENST00000367165 RAPGEF4Q8WZA2 1011 aa12.99□□□□□ -0.33
CLDN20-201ENST00000367165 HS3ST6Q96QI5 342 aa12.99□□□□□ -0.33
CLDN20-201ENST00000367165 CHD4Q14839 1912 aa12.98□□□□□ -0.33
CLDN20-201ENST00000367165 TUBGCP6Q96RT7 1819 aa12.98□□□□□ -0.33
CLDN20-201ENST00000367165 SENP3-EIF4A1A0A087X0R7 540 aa12.98□□□□□ -0.33
CLDN20-201ENST00000367165 C1QTNF8P60827 252 aa12.98□□□□□ -0.33
CLDN20-201ENST00000367165 RRS1Q15050 365 aaKnown RBP12.98□□□□□ -0.33
CLDN20-201ENST00000367165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
CLDN20-201ENST00000367165 GOLGB1Q14789 3259 aaKnown RBP12.97□□□□□ -0.33
CLDN20-201ENST00000367165 PCDH11XQ9BZA7 1347 aa12.97□□□□□ -0.33
CLDN20-201ENST00000367165 PCDH11YQ9BZA8 1340 aa12.97□□□□□ -0.33
CLDN20-201ENST00000367165 FBLN1P23142 703 aa12.97□□□□□ -0.33
CLDN20-201ENST00000367165 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
CLDN20-201ENST00000367165 NLGN2Q8NFZ4 835 aa12.97□□□□□ -0.33
CLDN20-201ENST00000367165 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
CLDN20-201ENST00000367165 FLT4P35916 1363 aa12.96□□□□□ -0.33
CLDN20-201ENST00000367165 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
CLDN20-201ENST00000367165 ECM2O94769 699 aaPredicted RBP12.96□□□□□ -0.33
CLDN20-201ENST00000367165 TATP17735 454 aaPredicted RBP12.96□□□□□ -0.33
CLDN20-201ENST00000367165 HMGB2P26583 209 aaKnown RBP12.96□□□□□ -0.33
CLDN20-201ENST00000367165 TMF1P82094 1093 aa12.96□□□□□ -0.33
CLDN20-201ENST00000367165 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
CLDN20-201ENST00000367165 GGNBP2Q9H3C7 697 aa12.96□□□□□ -0.33
CLDN20-201ENST00000367165 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.33
CLDN20-201ENST00000367165 INSRP06213 1382 aa12.95□□□□□ -0.34
CLDN20-201ENST00000367165 FYB1O15117 783 aa12.95□□□□□ -0.34
CLDN20-201ENST00000367165 GIGYF1O75420 1035 aaPredicted RBP12.95□□□□□ -0.34
CLDN20-201ENST00000367165 PALLDQ8WX93 1383 aa12.94□□□□□ -0.34
CLDN20-201ENST00000367165 KAT6BQ8WYB5 2073 aa12.94□□□□□ -0.34
CLDN20-201ENST00000367165 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.94□□□□□ -0.34
CLDN20-201ENST00000367165 GRIN3BO60391 1043 aa12.94□□□□□ -0.34
CLDN20-201ENST00000367165 COL23A1Q86Y22 540 aaPredicted RBP12.94□□□□□ -0.34
CLDN20-201ENST00000367165 ZFP91Q96JP5 570 aaPredicted RBP12.94□□□□□ -0.34
CLDN20-201ENST00000367165 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
CLDN20-201ENST00000367165 FLAD1Q8NFF5 587 aa12.93□□□□□ -0.34
CLDN20-201ENST00000367165 C5P01031 1676 aa12.93□□□□□ -0.34
CLDN20-201ENST00000367165 YBX3P16989 372 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLDN20-201ENST00000367165 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
CLDN20-201ENST00000367165 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
CLDN20-201ENST00000367165 MSL1Q68DK7 614 aa12.92□□□□□ -0.34
CLDN20-201ENST00000367165 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
CLDN20-201ENST00000367165 NSD3Q9BZ95 1437 aa12.91□□□□□ -0.34
CLDN20-201ENST00000367165 FAM205CA6NFA0 338 aa12.91□□□□□ -0.34
CLDN20-201ENST00000367165 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
CLDN20-201ENST00000367165 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
CLDN20-201ENST00000367165 CYP27B1O15528 508 aa12.9□□□□□ -0.34
CLDN20-201ENST00000367165 SMARCC1Q92922 1105 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms