RNA–Protein interactions for RNA: ENST00000366981.8

ATF3-203, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-203ENST00000366981 NBPF6Q5VWK0 638 aa9.54□□□□□ -0.88
ATF3-203ENST00000366981 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
ATF3-203ENST00000366981 NBPF4Q96M43 638 aa9.54□□□□□ -0.88
ATF3-203ENST00000366981 OVOS2A0A0G2JMS6 1433 aa9.54□□□□□ -0.88
ATF3-203ENST00000366981 ERBB3P21860 1342 aa9.54□□□□□ -0.88
ATF3-203ENST00000366981 CEMIPQ8WUJ3 1361 aa9.53□□□□□ -0.88
ATF3-203ENST00000366981 GAS2L2Q8NHY3 880 aa9.53□□□□□ -0.88
ATF3-203ENST00000366981 NGLY1Q96IV0 654 aa9.53□□□□□ -0.88
ATF3-203ENST00000366981 AXIN2Q9Y2T1 843 aa9.53□□□□□ -0.88
ATF3-203ENST00000366981 PARP4Q9UKK3 1724 aaKnown RBP9.53□□□□□ -0.88
ATF3-203ENST00000366981 KIAA0232Q92628 1395 aa9.52□□□□□ -0.88
ATF3-203ENST00000366981 CHL1O00533 1208 aa9.52□□□□□ -0.89
ATF3-203ENST00000366981 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
ATF3-203ENST00000366981 EXOSC9Q06265 439 aaKnown RBP9.52□□□□□ -0.89
ATF3-203ENST00000366981 PDE3AQ14432 1141 aa9.52□□□□□ -0.89
ATF3-203ENST00000366981 SHANK3Q9BYB0 1731 aa9.52□□□□□ -0.89
ATF3-203ENST00000366981 COL14A1Q05707 1796 aaKnown RBP9.51□□□□□ -0.89
ATF3-203ENST00000366981 N4BP2Q86UW6 1770 aaPredicted RBP9.51□□□□□ -0.89
ATF3-203ENST00000366981 BCAR3O75815 825 aa9.51□□□□□ -0.89
ATF3-203ENST00000366981 ALDH1L2Q3SY69 923 aa9.51□□□□□ -0.89
ATF3-203ENST00000366981 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.51□□□□□ -0.89
ATF3-203ENST00000366981 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
ATF3-203ENST00000366981 TSR2Q969E8 191 aaKnown RBP9.51□□□□□ -0.89
ATF3-203ENST00000366981 C8orf37Q96NL8 207 aa9.51□□□□□ -0.89
ATF3-203ENST00000366981 MBIPQ9NS73 344 aa9.51□□□□□ -0.89
ATF3-203ENST00000366981 BABAM1Q9NWV8 329 aa9.51□□□□□ -0.89
ATF3-203ENST00000366981 MAP3K5Q99683 1374 aa9.5□□□□□ -0.89
ATF3-203ENST00000366981 WNK3Q9BYP7 1800 aa9.5□□□□□ -0.89
ATF3-203ENST00000366981 FAM83GA6ND36 823 aa9.5□□□□□ -0.89
ATF3-203ENST00000366981 PLIN1O60240 522 aa9.5□□□□□ -0.89
ATF3-203ENST00000366981 VAMP4O75379 141 aa9.5□□□□□ -0.89
ATF3-203ENST00000366981 C20orf194Q5TEA3 1177 aa9.5□□□□□ -0.89
ATF3-203ENST00000366981 EXOC6Q8TAG9 804 aa9.5□□□□□ -0.89
ATF3-203ENST00000366981 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
ATF3-203ENST00000366981 THUMPD2Q9BTF0 503 aaKnown RBP9.5□□□□□ -0.89
ATF3-203ENST00000366981 COL5A2P05997 1499 aaPredicted RBP9.5□□□□□ -0.89
ATF3-203ENST00000366981 PLCH1Q4KWH8 1693 aa9.5□□□□□ -0.89
ATF3-203ENST00000366981 ATRNO75882 1429 aa9.49□□□□□ -0.89
ATF3-203ENST00000366981 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
ATF3-203ENST00000366981 DCAF8Q5TAQ9 597 aa9.49□□□□□ -0.89
ATF3-203ENST00000366981 LRRC59Q96AG4 307 aaKnown RBP9.49□□□□□ -0.89
ATF3-203ENST00000366981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.49□□□□□ -0.89
ATF3-203ENST00000366981 NRAPQ86VF7 1730 aa9.48□□□□□ -0.89
ATF3-203ENST00000366981 MRC1P22897 1456 aa9.48□□□□□ -0.89
ATF3-203ENST00000366981 GNAT3A8MTJ3 354 aa9.48□□□□□ -0.89
ATF3-203ENST00000366981 AAMPQ13685 434 aa9.48□□□□□ -0.89
ATF3-203ENST00000366981 DCTN1Q14203 1278 aa9.48□□□□□ -0.89
ATF3-203ENST00000366981 AMOTQ4VCS5 1084 aa9.48□□□□□ -0.89
ATF3-203ENST00000366981 IL17REQ8NFR9 667 aa9.48□□□□□ -0.89
ATF3-203ENST00000366981 SSH1Q8WYL5 1049 aa9.48□□□□□ -0.89
ATF3-203ENST00000366981 CRBNQ96SW2 442 aa9.48□□□□□ -0.89
ATF3-203ENST00000366981 WDR70Q9NW82 654 aa9.48□□□□□ -0.89
ATF3-203ENST00000366981 SOS1Q07889 1333 aaPredicted RBP9.48□□□□□ -0.89
ATF3-203ENST00000366981 MEGF6O75095 1541 aa9.47□□□□□ -0.89
ATF3-203ENST00000366981 ZC3H6P61129 1189 aaKnown RBP9.47□□□□□ -0.89
ATF3-203ENST00000366981 MCM10Q7L590 875 aa9.47□□□□□ -0.89
ATF3-203ENST00000366981 FNBP4Q8N3X1 1017 aaPredicted RBP9.47□□□□□ -0.89
ATF3-203ENST00000366981 CABLES1Q8TDN4 633 aa9.47□□□□□ -0.89
ATF3-203ENST00000366981 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
ATF3-203ENST00000366981 PODXL2Q9NZ53 605 aa9.47□□□□□ -0.89
ATF3-203ENST00000366981 TRPC5Q9UL62 973 aaPredicted RBP9.47□□□□□ -0.89
ATF3-203ENST00000366981 NWD2Q9ULI1 1742 aa9.46□□□□□ -0.89
ATF3-203ENST00000366981 PLEKHO1Q53GL0 409 aaPredicted RBP9.46□□□□□ -0.9
ATF3-203ENST00000366981 AKAP4Q5JQC9 854 aa9.46□□□□□ -0.9
ATF3-203ENST00000366981 USHBP1Q8N6Y0 703 aa9.46□□□□□ -0.9
ATF3-203ENST00000366981 TSPYL6Q8N831 410 aa9.46□□□□□ -0.9
ATF3-203ENST00000366981 ARHGAP45Q92619 1136 aa9.46□□□□□ -0.9
ATF3-203ENST00000366981 BCL11BQ9C0K0 894 aaPredicted RBP9.46□□□□□ -0.9
ATF3-203ENST00000366981 STK24Q9Y6E0 443 aa9.46□□□□□ -0.9
ATF3-203ENST00000366981 WDR17Q8IZU2 1322 aa9.46□□□□□ -0.9
ATF3-203ENST00000366981 EP400Q96L91 3159 aa9.45□□□□□ -0.9
ATF3-203ENST00000366981 MRPL50Q8N5N7 158 aaKnown RBP9.45□□□□□ -0.9
ATF3-203ENST00000366981 C8orf58Q8NAV2 365 aa9.45□□□□□ -0.9
ATF3-203ENST00000366981 ZC3H15Q8WU90 426 aaKnown RBP9.45□□□□□ -0.9
ATF3-203ENST00000366981 USP21Q9UK80 565 aa9.45□□□□□ -0.9
ATF3-203ENST00000366981 KIF16BQ96L93 1317 aa9.45□□□□□ -0.9
ATF3-203ENST00000366981 HEG1Q9ULI3 1381 aa9.45□□□□□ -0.9
ATF3-203ENST00000366981 BCL9LQ86UU0 1499 aa9.45□□□□□ -0.9
ATF3-203ENST00000366981 GLI3P10071 1580 aa9.45□□□□□ -0.9
ATF3-203ENST00000366981 PAPPAQ13219 1627 aa9.45□□□□□ -0.9
ATF3-203ENST00000366981 UBR2Q8IWV8 1755 aa9.45□□□□□ -0.9
ATF3-203ENST00000366981 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.44□□□□□ -0.9
ATF3-203ENST00000366981 MS4A1P11836 297 aa9.44□□□□□ -0.9
ATF3-203ENST00000366981 RLBP1P12271 317 aa9.44□□□□□ -0.9
ATF3-203ENST00000366981 TWISTNBQ3B726 338 aaPredicted RBP9.44□□□□□ -0.9
ATF3-203ENST00000366981 ZKSCAN2Q63HK3 967 aa9.44□□□□□ -0.9
ATF3-203ENST00000366981 B4GALNT3Q6L9W6 998 aa9.44□□□□□ -0.9
ATF3-203ENST00000366981 RTF1Q92541 710 aaKnown RBP9.44□□□□□ -0.9
ATF3-203ENST00000366981 ZFP91Q96JP5 570 aaPredicted RBP9.44□□□□□ -0.9
ATF3-203ENST00000366981 KDM2BQ8NHM5 1336 aa9.44□□□□□ -0.9
ATF3-203ENST00000366981 KDM6AO15550 1401 aaPredicted RBP9.44□□□□□ -0.9
ATF3-203ENST00000366981 TRIM27P14373 513 aa9.43□□□□□ -0.9
ATF3-203ENST00000366981 TAF7Q15545 349 aaPredicted RBP9.43□□□□□ -0.9
ATF3-203ENST00000366981 ATF7IPQ6VMQ6 1270 aa9.43□□□□□ -0.9
ATF3-203ENST00000366981 DISP2A7MBM2 1401 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 ABCC4O15439 1325 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 RNMTO43148 476 aaKnown RBP9.42□□□□□ -0.9
ATF3-203ENST00000366981 ADAMTS2O95450 1211 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 HOXB7P09629 217 aa9.42□□□□□ -0.9
ATF3-203ENST00000366981 CHRNA2Q15822 529 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms