RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 HOXC9P31274 260 aa18.27■□□□□ 0.52
PRKN-204ENST00000366896 ANKRD45Q5TZF3 282 aa18.27■□□□□ 0.52
PRKN-204ENST00000366896 SIRT2Q8IXJ6 389 aa18.26■□□□□ 0.51
PRKN-204ENST00000366896 CFAP44Q96MT7 982 aa18.26■□□□□ 0.51
PRKN-204ENST00000366896 CIZ1Q9ULV3 898 aaPredicted RBP18.26■□□□□ 0.51
PRKN-204ENST00000366896 ZC3H6P61129 1189 aaKnown RBP18.26■□□□□ 0.51
PRKN-204ENST00000366896 PKNOX2Q96KN3 472 aa18.26■□□□□ 0.51
PRKN-204ENST00000366896 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
PRKN-204ENST00000366896 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
PRKN-204ENST00000366896 IP6K1Q92551 441 aa18.25■□□□□ 0.51
PRKN-204ENST00000366896 ZBTB7CA1YPR0 619 aa18.25■□□□□ 0.51
PRKN-204ENST00000366896 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
PRKN-204ENST00000366896 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
PRKN-204ENST00000366896 CPDO75976 1380 aa18.25■□□□□ 0.51
PRKN-204ENST00000366896 EIF4A2Q14240 407 aaKnown RBP18.24■□□□□ 0.51
PRKN-204ENST00000366896 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
PRKN-204ENST00000366896 API5Q9BZZ5 524 aaKnown RBP18.24■□□□□ 0.51
PRKN-204ENST00000366896 COL18A1P39060 1754 aa18.24■□□□□ 0.51
PRKN-204ENST00000366896 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
PRKN-204ENST00000366896 KIAA0232Q92628 1395 aa18.23■□□□□ 0.51
PRKN-204ENST00000366896 RGPD1P0DJD0 1748 aa18.22■□□□□ 0.51
PRKN-204ENST00000366896 HAP1P54257 671 aaPredicted RBP18.21■□□□□ 0.51
PRKN-204ENST00000366896 TNPO1Q92973 898 aaKnown RBP18.21■□□□□ 0.51
PRKN-204ENST00000366896 KIF2CQ99661 725 aa18.21■□□□□ 0.51
PRKN-204ENST00000366896 ABCC6O95255 1503 aa18.21■□□□□ 0.51
PRKN-204ENST00000366896 RGPD5Q99666 1765 aa18.21■□□□□ 0.51
PRKN-204ENST00000366896 TBC1D9Q6ZT07 1266 aa18.2■□□□□ 0.5
PRKN-204ENST00000366896 GAS2L3Q86XJ1 694 aa18.2■□□□□ 0.5
PRKN-204ENST00000366896 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
PRKN-204ENST00000366896 AXIN2Q9Y2T1 843 aa18.2■□□□□ 0.5
PRKN-204ENST00000366896 TRIM44Q96DX7 344 aaPredicted RBP18.19■□□□□ 0.5
PRKN-204ENST00000366896 CD2BP2O95400 341 aaKnown RBP18.19■□□□□ 0.5
PRKN-204ENST00000366896 RAB3GAP1Q15042 981 aa18.19■□□□□ 0.5
PRKN-204ENST00000366896 CHRNA2Q15822 529 aa18.19■□□□□ 0.5
PRKN-204ENST00000366896 SKOR2Q2VWA4 1001 aaPredicted RBP18.19■□□□□ 0.5
PRKN-204ENST00000366896 GBP4Q96PP9 640 aa18.19■□□□□ 0.5
PRKN-204ENST00000366896 PTMSP20962 102 aa18.18■□□□□ 0.5
PRKN-204ENST00000366896 AEBP1Q8IUX7 1158 aa18.18■□□□□ 0.5
PRKN-204ENST00000366896 LTV1Q96GA3 475 aaPredicted RBP18.18■□□□□ 0.5
PRKN-204ENST00000366896 ZMYND15Q9H091 742 aa18.18■□□□□ 0.5
PRKN-204ENST00000366896 PRDM11Q9NQV5 511 aa18.18■□□□□ 0.5
PRKN-204ENST00000366896 LMO7Q8WWI1 1683 aa18.18■□□□□ 0.5
PRKN-204ENST00000366896 HSPA1LP34931 641 aa18.17■□□□□ 0.5
PRKN-204ENST00000366896 JCADQ9P266 1359 aa18.17■□□□□ 0.5
PRKN-204ENST00000366896 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
PRKN-204ENST00000366896 KRT24Q2M2I5 525 aa18.16■□□□□ 0.5
PRKN-204ENST00000366896 INTS3Q68E01 1043 aaKnown RBP18.16■□□□□ 0.5
PRKN-204ENST00000366896 EYA1Q99502 592 aa18.16■□□□□ 0.5
PRKN-204ENST00000366896 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
PRKN-204ENST00000366896 IGSF1Q8N6C5 1336 aa18.15■□□□□ 0.5
PRKN-204ENST00000366896 TPM2P07951 284 aa18.15■□□□□ 0.5
PRKN-204ENST00000366896 ANKRD24Q8TF21 1146 aa18.15■□□□□ 0.5
PRKN-204ENST00000366896 RGPD2P0DJD1 1756 aa18.15■□□□□ 0.5
PRKN-204ENST00000366896 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
PRKN-204ENST00000366896 DCTPP1Q9H773 170 aa18.15■□□□□ 0.5
PRKN-204ENST00000366896 CDC45O75419 566 aa18.14■□□□□ 0.49
PRKN-204ENST00000366896 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
PRKN-204ENST00000366896 CAMTA1Q9Y6Y1 1673 aa18.14■□□□□ 0.49
PRKN-204ENST00000366896 ERBB3P21860 1342 aa18.14■□□□□ 0.49
PRKN-204ENST00000366896 SULT6B1Q6IMI4 303 aa18.13■□□□□ 0.49
PRKN-204ENST00000366896 COL14A1Q05707 1796 aaKnown RBP18.13■□□□□ 0.49
PRKN-204ENST00000366896 RGS12O14924 1447 aa18.13■□□□□ 0.49
PRKN-204ENST00000366896 K7ELQ4 463 aaPredicted RBP18.12■□□□□ 0.49
PRKN-204ENST00000366896 KDRP35968 1356 aa18.12■□□□□ 0.49
PRKN-204ENST00000366896 NBPF6Q5VWK0 638 aa18.12■□□□□ 0.49
PRKN-204ENST00000366896 CLEC17AQ6ZS10 378 aa18.12■□□□□ 0.49
PRKN-204ENST00000366896 PLEKHM2Q8IWE5 1019 aa18.12■□□□□ 0.49
PRKN-204ENST00000366896 RPAP2Q8IXW5 612 aaPredicted RBP18.12■□□□□ 0.49
PRKN-204ENST00000366896 NBPF4Q96M43 638 aa18.12■□□□□ 0.49
PRKN-204ENST00000366896 CHL1O00533 1208 aa18.11■□□□□ 0.49
PRKN-204ENST00000366896 MCM10Q7L590 875 aa18.11■□□□□ 0.49
PRKN-204ENST00000366896 PPP1R9BQ96SB3 815 aa18.11■□□□□ 0.49
PRKN-204ENST00000366896 ATP10DQ9P241 1426 aa18.11■□□□□ 0.49
PRKN-204ENST00000366896 FAM208AQ9UK61 1670 aaKnown RBP18.11■□□□□ 0.49
PRKN-204ENST00000366896 NUTM2BA6NNL0 878 aaPredicted RBP18.11■□□□□ 0.49
PRKN-204ENST00000366896 NUTM2EB1AL46 878 aaPredicted RBP18.11■□□□□ 0.49
PRKN-204ENST00000366896 CCDC173Q0VFZ6 552 aa18.11■□□□□ 0.49
PRKN-204ENST00000366896 NUTM2AQ8IVF1 878 aaPredicted RBP18.11■□□□□ 0.49
PRKN-204ENST00000366896 ANKRD44Q8N8A2 993 aa18.11■□□□□ 0.49
PRKN-204ENST00000366896 COL5A2P05997 1499 aaPredicted RBP18.11■□□□□ 0.49
PRKN-204ENST00000366896 PTPRCP08575 1304 aa18.1■□□□□ 0.49
PRKN-204ENST00000366896 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
PRKN-204ENST00000366896 NCAPD2Q15021 1401 aa18.1■□□□□ 0.49
PRKN-204ENST00000366896 ADAMTS2O95450 1211 aa18.09■□□□□ 0.49
PRKN-204ENST00000366896 IBTKQ9P2D0 1353 aaPredicted RBP18.09■□□□□ 0.49
PRKN-204ENST00000366896 USHBP1Q8N6Y0 703 aa18.09■□□□□ 0.49
PRKN-204ENST00000366896 OTUD7AQ8TE49 926 aaPredicted RBP18.09■□□□□ 0.49
PRKN-204ENST00000366896 SPATA31A6Q5VVP1 1343 aa18.09■□□□□ 0.49
PRKN-204ENST00000366896 GAS2L2Q8NHY3 880 aa18.08■□□□□ 0.49
PRKN-204ENST00000366896 PLCH1Q4KWH8 1693 aa18.08■□□□□ 0.48
PRKN-204ENST00000366896 TTC22Q5TAA0 569 aa18.08■□□□□ 0.48
PRKN-204ENST00000366896 CSB-PGBD3P0DP91 1061 aa18.07■□□□□ 0.48
PRKN-204ENST00000366896 RABEP1Q15276 862 aa18.07■□□□□ 0.48
PRKN-204ENST00000366896 WDR17Q8IZU2 1322 aa18.07■□□□□ 0.48
PRKN-204ENST00000366896 LRP6O75581 1613 aa18.06■□□□□ 0.48
PRKN-204ENST00000366896 NASPP49321 788 aaPredicted RBP18.06■□□□□ 0.48
PRKN-204ENST00000366896 CEP85Q6P2H3 762 aa18.06■□□□□ 0.48
PRKN-204ENST00000366896 ZSCAN30Q86W11 494 aa18.06■□□□□ 0.48
PRKN-204ENST00000366896 PDCL3Q9H2J4 239 aa18.06■□□□□ 0.48
PRKN-204ENST00000366896 BTG4Q9NY30 223 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms