RNA–Protein interactions for RNA: ENST00000366873.6

CAPN8-202, Transcript of calpain 8, humanhuman

TSL 5 BASIC

Gene CAPN8, Length 2,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-202ENST00000366873 CFAP44Q96MT7 982 aa12.71□□□□□ -0.37
CAPN8-202ENST00000366873 IL16Q14005 1332 aa12.71□□□□□ -0.38
CAPN8-202ENST00000366873 CHL1O00533 1208 aa12.71□□□□□ -0.38
CAPN8-202ENST00000366873 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
CAPN8-202ENST00000366873 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
CAPN8-202ENST00000366873 TAF7Q15545 349 aaPredicted RBP12.7□□□□□ -0.38
CAPN8-202ENST00000366873 IFT57Q9NWB7 429 aa12.7□□□□□ -0.38
CAPN8-202ENST00000366873 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
CAPN8-202ENST00000366873 E9PSI1 815 aa12.69□□□□□ -0.38
CAPN8-202ENST00000366873 ANP32EQ9BTT0 268 aa12.69□□□□□ -0.38
CAPN8-202ENST00000366873 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
CAPN8-202ENST00000366873 LAS1LQ9Y4W2 734 aaKnown RBP12.69□□□□□ -0.38
CAPN8-202ENST00000366873 RGS12O14924 1447 aa12.69□□□□□ -0.38
CAPN8-202ENST00000366873 SCN11AQ9UI33 1791 aa12.68□□□□□ -0.38
CAPN8-202ENST00000366873 TEFQ10587 303 aa12.68□□□□□ -0.38
CAPN8-202ENST00000366873 MRC1P22897 1456 aa12.68□□□□□ -0.38
CAPN8-202ENST00000366873 TOGARAM1Q9Y4F4 1720 aa12.68□□□□□ -0.38
CAPN8-202ENST00000366873 GNAI1P63096 354 aa12.68□□□□□ -0.38
CAPN8-202ENST00000366873 CALD1Q05682 793 aaKnown RBP12.68□□□□□ -0.38
CAPN8-202ENST00000366873 KRT27Q7Z3Y8 459 aa12.68□□□□□ -0.38
CAPN8-202ENST00000366873 FANCIQ9NVI1 1328 aa12.67□□□□□ -0.38
CAPN8-202ENST00000366873 KCNQ3O43525 872 aa12.67□□□□□ -0.38
CAPN8-202ENST00000366873 KCNQ2O43526 872 aa12.67□□□□□ -0.38
CAPN8-202ENST00000366873 PRIM1P49642 420 aaKnown RBP12.67□□□□□ -0.38
CAPN8-202ENST00000366873 CABP4P57796 275 aa12.67□□□□□ -0.38
CAPN8-202ENST00000366873 PTF1AQ7RTS3 328 aa12.67□□□□□ -0.38
CAPN8-202ENST00000366873 PIGBQ92521 554 aa12.67□□□□□ -0.38
CAPN8-202ENST00000366873 BCL9O00512 1426 aa12.67□□□□□ -0.38
CAPN8-202ENST00000366873 ACSBG1Q96GR2 724 aa12.67□□□□□ -0.38
CAPN8-202ENST00000366873 BTBD11A6QL63 1104 aa12.66□□□□□ -0.38
CAPN8-202ENST00000366873 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
CAPN8-202ENST00000366873 BRWD3Q6RI45 1802 aa12.66□□□□□ -0.38
CAPN8-202ENST00000366873 SLC39A6Q13433 755 aa12.66□□□□□ -0.38
CAPN8-202ENST00000366873 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
CAPN8-202ENST00000366873 KRT24Q2M2I5 525 aa12.65□□□□□ -0.38
CAPN8-202ENST00000366873 MYH16Q9H6N6 1097 aa12.65□□□□□ -0.38
CAPN8-202ENST00000366873 BABAM1Q9NWV8 329 aa12.65□□□□□ -0.38
CAPN8-202ENST00000366873 TSPYL4Q9UJ04 414 aa12.65□□□□□ -0.38
CAPN8-202ENST00000366873 ZNF790Q6PG37 636 aa12.64□□□□□ -0.39
CAPN8-202ENST00000366873 TSPYL6Q8N831 410 aa12.64□□□□□ -0.39
CAPN8-202ENST00000366873 SYTL4Q96C24 671 aaPredicted RBP12.64□□□□□ -0.39
CAPN8-202ENST00000366873 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
CAPN8-202ENST00000366873 C8orf58Q8NAV2 365 aa12.64□□□□□ -0.39
CAPN8-202ENST00000366873 ASAP1Q9ULH1 1129 aa12.64□□□□□ -0.39
CAPN8-202ENST00000366873 EIF4A1P60842 406 aaKnown RBP12.63□□□□□ -0.39
CAPN8-202ENST00000366873 EXOSC9Q06265 439 aaKnown RBP12.63□□□□□ -0.39
CAPN8-202ENST00000366873 ATG3Q9NT62 314 aa12.63□□□□□ -0.39
CAPN8-202ENST00000366873 DOT1LQ8TEK3 1739 aa12.62□□□□□ -0.39
CAPN8-202ENST00000366873 HEG1Q9ULI3 1381 aa12.62□□□□□ -0.39
CAPN8-202ENST00000366873 ELL2O00472 640 aaPredicted RBP12.62□□□□□ -0.39
CAPN8-202ENST00000366873 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
CAPN8-202ENST00000366873 ITGB4P16144 1822 aa12.62□□□□□ -0.39
CAPN8-202ENST00000366873 B4GALNT3Q6L9W6 998 aa12.61□□□□□ -0.39
CAPN8-202ENST00000366873 ZNF496Q96IT1 587 aaPredicted RBP12.61□□□□□ -0.39
CAPN8-202ENST00000366873 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
CAPN8-202ENST00000366873 PRAMEF22A3QJZ6 481 aa12.61□□□□□ -0.39
CAPN8-202ENST00000366873 VAMP4O75379 141 aa12.6□□□□□ -0.39
CAPN8-202ENST00000366873 KDM3BQ7LBC6 1761 aa12.6□□□□□ -0.39
CAPN8-202ENST00000366873 SLC4A9Q96Q91 983 aa12.6□□□□□ -0.39
CAPN8-202ENST00000366873 GIGYF1O75420 1035 aaPredicted RBP12.59□□□□□ -0.39
CAPN8-202ENST00000366873 PTCD1O75127 700 aaKnown RBP12.59□□□□□ -0.39
CAPN8-202ENST00000366873 TRIM37O94972 964 aa12.59□□□□□ -0.39
CAPN8-202ENST00000366873 BCL11BQ9C0K0 894 aaPredicted RBP12.59□□□□□ -0.39
CAPN8-202ENST00000366873 KCPQ6ZWJ8 1503 aa12.58□□□□□ -0.39
CAPN8-202ENST00000366873 TWISTNBQ3B726 338 aaPredicted RBP12.58□□□□□ -0.4
CAPN8-202ENST00000366873 SBF2Q86WG5 1849 aa12.58□□□□□ -0.4
CAPN8-202ENST00000366873 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
CAPN8-202ENST00000366873 TTC5Q8N0Z6 440 aa12.58□□□□□ -0.4
CAPN8-202ENST00000366873 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
CAPN8-202ENST00000366873 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
CAPN8-202ENST00000366873 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
CAPN8-202ENST00000366873 UBR2Q8IWV8 1755 aa12.56□□□□□ -0.4
CAPN8-202ENST00000366873 RARSP54136 660 aaKnown RBP12.56□□□□□ -0.4
CAPN8-202ENST00000366873 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
CAPN8-202ENST00000366873 CT47B1P0C2W7 299 aaPredicted RBP12.55□□□□□ -0.4
CAPN8-202ENST00000366873 SNRPA1P09661 255 aaKnown RBP12.55□□□□□ -0.4
CAPN8-202ENST00000366873 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
CAPN8-202ENST00000366873 RCAN3Q9UKA8 241 aa12.55□□□□□ -0.4
CAPN8-202ENST00000366873 BCAR3O75815 825 aa12.54□□□□□ -0.4
CAPN8-202ENST00000366873 HOXB7P09629 217 aa12.54□□□□□ -0.4
CAPN8-202ENST00000366873 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
CAPN8-202ENST00000366873 SSH1Q8WYL5 1049 aa12.54□□□□□ -0.4
CAPN8-202ENST00000366873 BTAF1O14981 1849 aa12.54□□□□□ -0.4
CAPN8-202ENST00000366873 LOC102724428A0A0B4J2F2 783 aa12.54□□□□□ -0.4
CAPN8-202ENST00000366873 TCERG1O14776 1098 aaKnown RBP12.54□□□□□ -0.4
CAPN8-202ENST00000366873 SIK1P57059 783 aa12.54□□□□□ -0.4
CAPN8-202ENST00000366873 BCL2L13Q9BXK5 485 aa12.54□□□□□ -0.4
CAPN8-202ENST00000366873 KCNQ4P56696 695 aa12.53□□□□□ -0.4
CAPN8-202ENST00000366873 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
CAPN8-202ENST00000366873 EIF2S2P20042 333 aaKnown RBP12.53□□□□□ -0.4
CAPN8-202ENST00000366873 PROM2Q8N271 834 aa12.53□□□□□ -0.4
CAPN8-202ENST00000366873 SMARCC1Q92922 1105 aaPredicted RBP12.53□□□□□ -0.4
CAPN8-202ENST00000366873 SOS1Q07889 1333 aaPredicted RBP12.53□□□□□ -0.4
CAPN8-202ENST00000366873 ITPK1Q13572 414 aa12.52□□□□□ -0.4
CAPN8-202ENST00000366873 PDIA6Q15084 440 aa12.52□□□□□ -0.4
CAPN8-202ENST00000366873 DNAJC10Q8IXB1 793 aa12.52□□□□□ -0.4
CAPN8-202ENST00000366873 ZNF428Q96B54 188 aa12.52□□□□□ -0.4
CAPN8-202ENST00000366873 HDGFL1Q5TGJ6 251 aa12.52□□□□□ -0.41
CAPN8-202ENST00000366873 ATP6V1AP38606 617 aa12.51□□□□□ -0.41
CAPN8-202ENST00000366873 ALDH1L2Q3SY69 923 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms