RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 ZNF316A6NFI3 1004 aaPredicted RBP19.5■□□□□ 0.71
MRPL55-218ENST00000366747 GNAT3A8MTJ3 354 aa19.5■□□□□ 0.71
MRPL55-218ENST00000366747 FLAD1Q8NFF5 587 aa19.5■□□□□ 0.71
MRPL55-218ENST00000366747 MTFR1LQ9H019 292 aa19.5■□□□□ 0.71
MRPL55-218ENST00000366747 QSER1Q2KHR3 1735 aa19.5■□□□□ 0.71
MRPL55-218ENST00000366747 NFATC2IPQ8NCF5 419 aa19.49■□□□□ 0.71
MRPL55-218ENST00000366747 SCN11AQ9UI33 1791 aa19.49■□□□□ 0.71
MRPL55-218ENST00000366747 ZNF831Q5JPB2 1677 aa19.49■□□□□ 0.71
MRPL55-218ENST00000366747 KCNQ4P56696 695 aa19.48■□□□□ 0.71
MRPL55-218ENST00000366747 PRKRIP1Q9H875 184 aaPredicted RBP19.48■□□□□ 0.71
MRPL55-218ENST00000366747 C5P01031 1676 aa19.48■□□□□ 0.71
MRPL55-218ENST00000366747 ATP6V1AP38606 617 aa19.47■□□□□ 0.71
MRPL55-218ENST00000366747 PNPLA7Q6ZV29 1317 aa19.47■□□□□ 0.71
MRPL55-218ENST00000366747 HTATSF1O43719 755 aaKnown RBP19.46■□□□□ 0.71
MRPL55-218ENST00000366747 AK7Q96M32 723 aa19.46■□□□□ 0.71
MRPL55-218ENST00000366747 LGR6Q9HBX8 967 aa19.46■□□□□ 0.71
MRPL55-218ENST00000366747 PHACTR3Q96KR7 559 aa19.45■□□□□ 0.7
MRPL55-218ENST00000366747 C4BP0C0L5 1744 aa19.45■□□□□ 0.7
MRPL55-218ENST00000366747 CEMIPQ8WUJ3 1361 aa19.44■□□□□ 0.7
MRPL55-218ENST00000366747 ZBTB7AO95365 584 aa19.44■□□□□ 0.7
MRPL55-218ENST00000366747 TEFQ10587 303 aa19.44■□□□□ 0.7
MRPL55-218ENST00000366747 PDGFDQ9GZP0 370 aaPredicted RBP19.44■□□□□ 0.7
MRPL55-218ENST00000366747 SRCAPQ6ZRS2 3230 aa19.44■□□□□ 0.7
MRPL55-218ENST00000366747 SSFA2P28290 1259 aa19.43■□□□□ 0.7
MRPL55-218ENST00000366747 ITPK1Q13572 414 aa19.43■□□□□ 0.7
MRPL55-218ENST00000366747 RC3H1Q5TC82 1133 aaKnown RBP19.43■□□□□ 0.7
MRPL55-218ENST00000366747 LINC00116Q8NCU8 138 aa19.43■□□□□ 0.7
MRPL55-218ENST00000366747 RTF1Q92541 710 aaKnown RBP19.43■□□□□ 0.7
MRPL55-218ENST00000366747 RBM42Q9BTD8 480 aaKnown RBP19.43■□□□□ 0.7
MRPL55-218ENST00000366747 TAF1LQ8IZX4 1826 aa19.43■□□□□ 0.7
MRPL55-218ENST00000366747 CNTNAP4Q9C0A0 1308 aa19.43■□□□□ 0.7
MRPL55-218ENST00000366747 CICQ96RK0 1608 aaPredicted RBP19.43■□□□□ 0.7
MRPL55-218ENST00000366747 IL17REQ8NFR9 667 aa19.42■□□□□ 0.7
MRPL55-218ENST00000366747 PPP1R1BQ9UD71 204 aaPredicted RBP19.42■□□□□ 0.7
MRPL55-218ENST00000366747 PTGER2P43116 358 aa19.41■□□□□ 0.7
MRPL55-218ENST00000366747 VSIG10Q8N0Z9 540 aa19.41■□□□□ 0.7
MRPL55-218ENST00000366747 PLEKHF1Q96S99 279 aa19.41■□□□□ 0.7
MRPL55-218ENST00000366747 MAPK8IP3Q9UPT6 1336 aa19.41■□□□□ 0.7
MRPL55-218ENST00000366747 ADRA2BP18089 450 aa19.4■□□□□ 0.7
MRPL55-218ENST00000366747 SLC4A9Q96Q91 983 aa19.4■□□□□ 0.7
MRPL55-218ENST00000366747 SGIP1Q9BQI5 828 aa19.4■□□□□ 0.7
MRPL55-218ENST00000366747 PTCD1O75127 700 aaKnown RBP19.39■□□□□ 0.69
MRPL55-218ENST00000366747 POLD1P28340 1107 aa19.39■□□□□ 0.69
MRPL55-218ENST00000366747 COL23A1Q86Y22 540 aaPredicted RBP19.39■□□□□ 0.69
MRPL55-218ENST00000366747 TTC5Q8N0Z6 440 aa19.39■□□□□ 0.69
MRPL55-218ENST00000366747 ATF5Q9Y2D1 282 aaPredicted RBP19.39■□□□□ 0.69
MRPL55-218ENST00000366747 GNPATO15228 680 aa19.38■□□□□ 0.69
MRPL55-218ENST00000366747 TUBGCP6Q96RT7 1819 aa19.37■□□□□ 0.69
MRPL55-218ENST00000366747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.37■□□□□ 0.69
MRPL55-218ENST00000366747 WDR43Q15061 677 aaKnown RBP eCLIP19.37■□□□□ 0.69
MRPL55-218ENST00000366747 NFE2L2Q16236 605 aa19.37■□□□□ 0.69
MRPL55-218ENST00000366747 RTCBQ9Y3I0 505 aaKnown RBP19.37■□□□□ 0.69
MRPL55-218ENST00000366747 KCPQ6ZWJ8 1503 aa19.36■□□□□ 0.69
MRPL55-218ENST00000366747 MSH5O43196 834 aa19.36■□□□□ 0.69
MRPL55-218ENST00000366747 ZNF790Q6PG37 636 aa19.36■□□□□ 0.69
MRPL55-218ENST00000366747 COL5A3P25940 1745 aaPredicted RBP19.35■□□□□ 0.69
MRPL55-218ENST00000366747 COL24A1Q17RW2 1714 aa19.35■□□□□ 0.69
MRPL55-218ENST00000366747 RPS6KA4O75676 772 aa19.35■□□□□ 0.69
MRPL55-218ENST00000366747 SLC39A6Q13433 755 aa19.35■□□□□ 0.69
MRPL55-218ENST00000366747 UBR3Q6ZT12 1888 aa19.35■□□□□ 0.69
MRPL55-218ENST00000366747 ARXQ96QS3 562 aa19.34■□□□□ 0.69
MRPL55-218ENST00000366747 TEX13AQ9BXU3 409 aaPredicted RBP19.34■□□□□ 0.69
MRPL55-218ENST00000366747 VIRMAQ69YN4 1812 aaKnown RBP19.34■□□□□ 0.69
MRPL55-218ENST00000366747 BTBD11A6QL63 1104 aa19.33■□□□□ 0.68
MRPL55-218ENST00000366747 CRKLP46109 303 aaKnown RBP19.33■□□□□ 0.68
MRPL55-218ENST00000366747 LMOD3Q0VAK6 560 aa19.33■□□□□ 0.68
MRPL55-218ENST00000366747 TRAPPC3LQ5T215 181 aa19.33■□□□□ 0.68
MRPL55-218ENST00000366747 PNISRQ8TF01 805 aaKnown RBP19.33■□□□□ 0.68
MRPL55-218ENST00000366747 FMNL2Q96PY5 1086 aa19.33■□□□□ 0.68
MRPL55-218ENST00000366747 SIPA1L3O60292 1781 aaPredicted RBP19.33■□□□□ 0.68
MRPL55-218ENST00000366747 HEG1Q9ULI3 1381 aa19.32■□□□□ 0.68
MRPL55-218ENST00000366747 UBR2Q8IWV8 1755 aa19.32■□□□□ 0.68
MRPL55-218ENST00000366747 ANP32CO43423 234 aa19.32■□□□□ 0.68
MRPL55-218ENST00000366747 PHF14O94880 888 aa19.32■□□□□ 0.68
MRPL55-218ENST00000366747 MCM10Q7L590 875 aa19.32■□□□□ 0.68
MRPL55-218ENST00000366747 TJP1Q07157 1748 aa19.31■□□□□ 0.68
MRPL55-218ENST00000366747 STARD3NLO95772 234 aa19.31■□□□□ 0.68
MRPL55-218ENST00000366747 AMIGO3Q86WK7 504 aa19.31■□□□□ 0.68
MRPL55-218ENST00000366747 DNAJC10Q8IXB1 793 aa19.31■□□□□ 0.68
MRPL55-218ENST00000366747 CCDC87Q9NVE4 849 aa19.31■□□□□ 0.68
MRPL55-218ENST00000366747 CYP19A1P11511 503 aaPredicted RBP19.3■□□□□ 0.68
MRPL55-218ENST00000366747 TAF7Q15545 349 aaPredicted RBP19.3■□□□□ 0.68
MRPL55-218ENST00000366747 RUNDC1Q96C34 613 aa19.3■□□□□ 0.68
MRPL55-218ENST00000366747 ZNF496Q96IT1 587 aaPredicted RBP19.3■□□□□ 0.68
MRPL55-218ENST00000366747 RFC4P35249 363 aa19.28■□□□□ 0.68
MRPL55-218ENST00000366747 TMPOP42166 694 aaKnown RBP19.28■□□□□ 0.68
MRPL55-218ENST00000366747 INTS5Q6P9B9 1019 aaKnown RBP19.28■□□□□ 0.68
MRPL55-218ENST00000366747 ADAMTS8Q9UP79 889 aa19.28■□□□□ 0.68
MRPL55-218ENST00000366747 RIPK4P57078 832 aa19.27■□□□□ 0.68
MRPL55-218ENST00000366747 DCTN1Q14203 1278 aa19.27■□□□□ 0.68
MRPL55-218ENST00000366747 NLGN1Q8N2Q7 840 aa19.27■□□□□ 0.68
MRPL55-218ENST00000366747 ARHGEF1Q92888 912 aaKnown RBP19.27■□□□□ 0.68
MRPL55-218ENST00000366747 FHDC1Q9C0D6 1143 aaPredicted RBP19.27■□□□□ 0.68
MRPL55-218ENST00000366747 BABAM1Q9NWV8 329 aa19.27■□□□□ 0.68
MRPL55-218ENST00000366747 SOS1Q07889 1333 aaPredicted RBP19.26■□□□□ 0.67
MRPL55-218ENST00000366747 SYT17Q9BSW7 474 aa19.26■□□□□ 0.67
MRPL55-218ENST00000366747 DCAF8L1A6NGE4 600 aa19.25■□□□□ 0.67
MRPL55-218ENST00000366747 SNRPA1P09661 255 aaKnown RBP19.25■□□□□ 0.67
MRPL55-218ENST00000366747 MSL1Q68DK7 614 aa19.24■□□□□ 0.67
MRPL55-218ENST00000366747 USP42Q9H9J4 1324 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms