RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
RN7SKP249-201ENST00000365490 MBIPQ9NS73 344 aa12.71□□□□□ -0.37
RN7SKP249-201ENST00000365490 BRWD3Q6RI45 1802 aa12.71□□□□□ -0.38
RN7SKP249-201ENST00000365490 ITGB4P16144 1822 aa12.7□□□□□ -0.38
RN7SKP249-201ENST00000365490 CABP4P57796 275 aa12.7□□□□□ -0.38
RN7SKP249-201ENST00000365490 KDM3BQ7LBC6 1761 aa12.7□□□□□ -0.38
RN7SKP249-201ENST00000365490 A0A0G2JS52 829 aa12.69□□□□□ -0.38
RN7SKP249-201ENST00000365490 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
RN7SKP249-201ENST00000365490 MYT1Q01538 1121 aa12.69□□□□□ -0.38
RN7SKP249-201ENST00000365490 TSR2Q969E8 191 aaKnown RBP12.69□□□□□ -0.38
RN7SKP249-201ENST00000365490 MIS18AQ9NYP9 233 aa12.69□□□□□ -0.38
RN7SKP249-201ENST00000365490 TSPYL4Q9UJ04 414 aa12.69□□□□□ -0.38
RN7SKP249-201ENST00000365490 LAS1LQ9Y4W2 734 aaKnown RBP12.69□□□□□ -0.38
RN7SKP249-201ENST00000365490 KRT27Q7Z3Y8 459 aa12.68□□□□□ -0.38
RN7SKP249-201ENST00000365490 DOT1LQ8TEK3 1739 aa12.68□□□□□ -0.38
RN7SKP249-201ENST00000365490 HEG1Q9ULI3 1381 aa12.68□□□□□ -0.38
RN7SKP249-201ENST00000365490 PAPPAQ13219 1627 aa12.67□□□□□ -0.38
RN7SKP249-201ENST00000365490 CT47B1P0C2W7 299 aaPredicted RBP12.67□□□□□ -0.38
RN7SKP249-201ENST00000365490 PRIM1P49642 420 aaKnown RBP12.67□□□□□ -0.38
RN7SKP249-201ENST00000365490 ZNF790Q6PG37 636 aa12.67□□□□□ -0.38
RN7SKP249-201ENST00000365490 PIGBQ92521 554 aa12.67□□□□□ -0.38
RN7SKP249-201ENST00000365490 TMOD3Q9NYL9 352 aa12.67□□□□□ -0.38
RN7SKP249-201ENST00000365490 RGS12O14924 1447 aa12.67□□□□□ -0.38
RN7SKP249-201ENST00000365490 KCNQ3O43525 872 aa12.66□□□□□ -0.38
RN7SKP249-201ENST00000365490 CENPBP07199 599 aaPredicted RBP12.66□□□□□ -0.38
RN7SKP249-201ENST00000365490 EIF4A1P60842 406 aaKnown RBP12.66□□□□□ -0.38
RN7SKP249-201ENST00000365490 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
RN7SKP249-201ENST00000365490 FAM196AQ6ZSG2 479 aa12.66□□□□□ -0.38
RN7SKP249-201ENST00000365490 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
RN7SKP249-201ENST00000365490 SOS1Q07889 1333 aaPredicted RBP12.65□□□□□ -0.38
RN7SKP249-201ENST00000365490 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
RN7SKP249-201ENST00000365490 ATG3Q9NT62 314 aa12.65□□□□□ -0.38
RN7SKP249-201ENST00000365490 UBR2Q8IWV8 1755 aa12.65□□□□□ -0.38
RN7SKP249-201ENST00000365490 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
RN7SKP249-201ENST00000365490 KCNQ2O43526 872 aa12.64□□□□□ -0.39
RN7SKP249-201ENST00000365490 VAMP4O75379 141 aa12.64□□□□□ -0.39
RN7SKP249-201ENST00000365490 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
RN7SKP249-201ENST00000365490 FAM182BQ5T319 152 aa12.64□□□□□ -0.39
RN7SKP249-201ENST00000365490 TSPYL6Q8N831 410 aa12.64□□□□□ -0.39
RN7SKP249-201ENST00000365490 ZNF428Q96B54 188 aa12.64□□□□□ -0.39
RN7SKP249-201ENST00000365490 HOXB7P09629 217 aa12.63□□□□□ -0.39
RN7SKP249-201ENST00000365490 ACSBG1Q96GR2 724 aa12.63□□□□□ -0.39
RN7SKP249-201ENST00000365490 ASAP1Q9ULH1 1129 aa12.63□□□□□ -0.39
RN7SKP249-201ENST00000365490 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
RN7SKP249-201ENST00000365490 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
RN7SKP249-201ENST00000365490 KRT24Q2M2I5 525 aa12.62□□□□□ -0.39
RN7SKP249-201ENST00000365490 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
RN7SKP249-201ENST00000365490 ZNF496Q96IT1 587 aaPredicted RBP12.62□□□□□ -0.39
RN7SKP249-201ENST00000365490 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
RN7SKP249-201ENST00000365490 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
RN7SKP249-201ENST00000365490 PTF1AQ7RTS3 328 aa12.61□□□□□ -0.39
RN7SKP249-201ENST00000365490 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
RN7SKP249-201ENST00000365490 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
RN7SKP249-201ENST00000365490 SYTL4Q96C24 671 aaPredicted RBP12.61□□□□□ -0.39
RN7SKP249-201ENST00000365490 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
RN7SKP249-201ENST00000365490 RCAN3Q9UKA8 241 aa12.61□□□□□ -0.39
RN7SKP249-201ENST00000365490 SMARCC1Q92922 1105 aaPredicted RBP12.6□□□□□ -0.39
RN7SKP249-201ENST00000365490 ZNF831Q5JPB2 1677 aa12.6□□□□□ -0.39
RN7SKP249-201ENST00000365490 BTAF1O14981 1849 aa12.6□□□□□ -0.39
RN7SKP249-201ENST00000365490 ELL2O00472 640 aaPredicted RBP12.59□□□□□ -0.39
RN7SKP249-201ENST00000365490 SNRPA1P09661 255 aaKnown RBP12.59□□□□□ -0.39
RN7SKP249-201ENST00000365490 RARSP54136 660 aaKnown RBP12.59□□□□□ -0.39
RN7SKP249-201ENST00000365490 BRPF1P55201 1214 aaPredicted RBP12.59□□□□□ -0.39
RN7SKP249-201ENST00000365490 ALDH1L2Q3SY69 923 aa12.59□□□□□ -0.39
RN7SKP249-201ENST00000365490 CHMP4AQ9BY43 222 aa12.59□□□□□ -0.39
RN7SKP249-201ENST00000365490 CICQ96RK0 1608 aaPredicted RBP12.59□□□□□ -0.39
RN7SKP249-201ENST00000365490 SLC4A9Q96Q91 983 aa12.58□□□□□ -0.4
RN7SKP249-201ENST00000365490 RNF123Q5XPI4 1314 aa12.58□□□□□ -0.4
RN7SKP249-201ENST00000365490 C5P01031 1676 aa12.57□□□□□ -0.4
RN7SKP249-201ENST00000365490 PTCD1O75127 700 aaKnown RBP12.57□□□□□ -0.4
RN7SKP249-201ENST00000365490 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
RN7SKP249-201ENST00000365490 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
RN7SKP249-201ENST00000365490 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 EP400Q96L91 3159 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 PRAMEF22A3QJZ6 481 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 TRIM37O94972 964 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 SIK1P57059 783 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 CCDC30Q5VVM6 783 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 LY75O60449 1722 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 CACNA1FO60840 1977 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 LAMB4A4D0S4 1761 aa12.56□□□□□ -0.4
RN7SKP249-201ENST00000365490 BCAR3O75815 825 aa12.55□□□□□ -0.4
RN7SKP249-201ENST00000365490 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
RN7SKP249-201ENST00000365490 TJP1Q07157 1748 aa12.54□□□□□ -0.4
RN7SKP249-201ENST00000365490 PLSCR1O15162 318 aa12.54□□□□□ -0.4
RN7SKP249-201ENST00000365490 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
RN7SKP249-201ENST00000365490 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
RN7SKP249-201ENST00000365490 ERBB4Q15303 1308 aa12.54□□□□□ -0.4
RN7SKP249-201ENST00000365490 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
RN7SKP249-201ENST00000365490 CYP19A1P11511 503 aaPredicted RBP12.53□□□□□ -0.4
RN7SKP249-201ENST00000365490 PDIA6Q15084 440 aa12.53□□□□□ -0.4
RN7SKP249-201ENST00000365490 DNAJC10Q8IXB1 793 aa12.53□□□□□ -0.4
RN7SKP249-201ENST00000365490 DBF4Q9UBU7 674 aaPredicted RBP12.53□□□□□ -0.4
RN7SKP249-201ENST00000365490 SUPT16HQ9Y5B9 1047 aaKnown RBP12.53□□□□□ -0.4
RN7SKP249-201ENST00000365490 STARD3NLO95772 234 aa12.52□□□□□ -0.41
RN7SKP249-201ENST00000365490 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
RN7SKP249-201ENST00000365490 EIF2S2P20042 333 aaKnown RBP12.52□□□□□ -0.41
RN7SKP249-201ENST00000365490 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms