RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 PAPPAQ13219 1627 aa7.15□□□□□ -1.27
RNU1-43P-201ENST00000365052 PKD1L3Q7Z443 1732 aa7.15□□□□□ -1.27
RNU1-43P-201ENST00000365052 TOGARAM1Q9Y4F4 1720 aa7.15□□□□□ -1.27
RNU1-43P-201ENST00000365052 ERVV-2B6SEH9 535 aa7.14□□□□□ -1.27
RNU1-43P-201ENST00000365052 GPR162Q16538 588 aa7.14□□□□□ -1.27
RNU1-43P-201ENST00000365052 NLGN2Q8NFZ4 835 aa7.14□□□□□ -1.27
RNU1-43P-201ENST00000365052 SLC4A9Q96Q91 983 aa7.14□□□□□ -1.27
RNU1-43P-201ENST00000365052 TUBGCP6Q96RT7 1819 aa7.14□□□□□ -1.27
RNU1-43P-201ENST00000365052 WWC3Q9ULE0 1092 aa7.14□□□□□ -1.27
RNU1-43P-201ENST00000365052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.13□□□□□ -1.27
RNU1-43P-201ENST00000365052 GNPATO15228 680 aa7.13□□□□□ -1.27
RNU1-43P-201ENST00000365052 RNMTO43148 476 aaKnown RBP7.13□□□□□ -1.27
RNU1-43P-201ENST00000365052 SLC39A6Q13433 755 aa7.13□□□□□ -1.27
RNU1-43P-201ENST00000365052 MTHFSDQ2M296 383 aaKnown RBP7.13□□□□□ -1.27
RNU1-43P-201ENST00000365052 AKAP4Q5JQC9 854 aa7.13□□□□□ -1.27
RNU1-43P-201ENST00000365052 FLAD1Q8NFF5 587 aa7.13□□□□□ -1.27
RNU1-43P-201ENST00000365052 TAF1LQ8IZX4 1826 aa7.12□□□□□ -1.27
RNU1-43P-201ENST00000365052 C5P01031 1676 aa7.12□□□□□ -1.27
RNU1-43P-201ENST00000365052 KDM6AO15550 1401 aaPredicted RBP7.11□□□□□ -1.27
RNU1-43P-201ENST00000365052 HMGB2P26583 209 aaKnown RBP7.11□□□□□ -1.27
RNU1-43P-201ENST00000365052 TRAPPC3LQ5T215 181 aa7.11□□□□□ -1.27
RNU1-43P-201ENST00000365052 ARHGEF1Q92888 912 aaKnown RBP7.11□□□□□ -1.27
RNU1-43P-201ENST00000365052 RTCBQ9Y3I0 505 aaKnown RBP7.11□□□□□ -1.27
RNU1-43P-201ENST00000365052 C4BP0C0L5 1744 aa7.1□□□□□ -1.27
RNU1-43P-201ENST00000365052 SSFA2P28290 1259 aa7.1□□□□□ -1.27
RNU1-43P-201ENST00000365052 PPP2R1AP30153 589 aa7.1□□□□□ -1.27
RNU1-43P-201ENST00000365052 DNAJC10Q8IXB1 793 aa7.1□□□□□ -1.27
RNU1-43P-201ENST00000365052 CFAP53Q96M91 514 aa7.1□□□□□ -1.27
RNU1-43P-201ENST00000365052 SLC52A2Q9HAB3 445 aa7.1□□□□□ -1.27
RNU1-43P-201ENST00000365052 QSER1Q2KHR3 1735 aa7.1□□□□□ -1.27
RNU1-43P-201ENST00000365052 KDRP35968 1356 aa7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 RPS6KA4O75676 772 aa7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 U2AF1L5P0DN76 240 aaPredicted RBP7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 PRKAR2BP31323 418 aa7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 RFC4P35249 363 aa7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 CRKLP46109 303 aaKnown RBP7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 U2AF1Q01081 240 aaKnown RBP eCLIP7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 DDX10Q13206 875 aaKnown RBP7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 RC3H1Q5TC82 1133 aaKnown RBP7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 PHACTR3Q96KR7 559 aa7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 SRP68Q9UHB9 627 aaKnown RBP7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 NUDCQ9Y266 331 aa7.09□□□□□ -1.27
RNU1-43P-201ENST00000365052 NPC1L1Q9UHC9 1359 aa7.08□□□□□ -1.28
RNU1-43P-201ENST00000365052 GNAT3A8MTJ3 354 aa7.08□□□□□ -1.28
RNU1-43P-201ENST00000365052 MMP10P09238 476 aa7.08□□□□□ -1.28
RNU1-43P-201ENST00000365052 IL17REQ8NFR9 667 aa7.08□□□□□ -1.28
RNU1-43P-201ENST00000365052 UBR3Q6ZT12 1888 aa7.08□□□□□ -1.28
RNU1-43P-201ENST00000365052 GYS1P13807 737 aa7.07□□□□□ -1.28
RNU1-43P-201ENST00000365052 YBX3P16989 372 aaKnown RBP eCLIP7.07□□□□□ -1.28
RNU1-43P-201ENST00000365052 CANXP27824 592 aaKnown RBP7.07□□□□□ -1.28
RNU1-43P-201ENST00000365052 TEFQ10587 303 aa7.07□□□□□ -1.28
RNU1-43P-201ENST00000365052 DCTN1Q14203 1278 aa7.07□□□□□ -1.28
RNU1-43P-201ENST00000365052 INTS5Q6P9B9 1019 aaKnown RBP7.07□□□□□ -1.28
RNU1-43P-201ENST00000365052 TTC5Q8N0Z6 440 aa7.07□□□□□ -1.28
RNU1-43P-201ENST00000365052 RSPH6AQ9H0K4 717 aa7.07□□□□□ -1.28
RNU1-43P-201ENST00000365052 SCN11AQ9UI33 1791 aa7.07□□□□□ -1.28
RNU1-43P-201ENST00000365052 MYH14Q7Z406 1995 aaKnown RBP7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 A0A0G2JLW4 131 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 KCNQ3O43525 872 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 CYP19A1P11511 503 aaPredicted RBP7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 FKBP8Q14318 412 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 USPL1Q5W0Q7 1092 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 MCM10Q7L590 875 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 NLGN1Q8N2Q7 840 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 GAS2L2Q8NHY3 880 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 CCDC87Q9NVE4 849 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 ZNF330Q9Y3S2 320 aaPredicted RBP7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 CD2APQ9Y5K6 639 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 PARP3Q9Y6F1 533 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 MAP3K5Q99683 1374 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 PLEKHG2Q9H7P9 1386 aa7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 VIRMAQ69YN4 1812 aaKnown RBP7.06□□□□□ -1.28
RNU1-43P-201ENST00000365052 COL3A1P02461 1466 aaPredicted RBP7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 CNTNAP4Q9C0A0 1308 aa7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 COL24A1Q17RW2 1714 aa7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 BTBD11A6QL63 1104 aa7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 GRIN3BO60391 1043 aa7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 ZPR1O75312 459 aa7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 ZNF784Q8NCA9 323 aaPredicted RBP7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 RTF1Q92541 710 aaKnown RBP7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 ZNF496Q96IT1 587 aaPredicted RBP7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 MIS18AQ9NYP9 233 aa7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 ZBTB1Q9Y2K1 713 aa7.05□□□□□ -1.28
RNU1-43P-201ENST00000365052 FCHSD2O94868 740 aa7.04□□□□□ -1.28
RNU1-43P-201ENST00000365052 A1BGP04217 495 aa7.04□□□□□ -1.28
RNU1-43P-201ENST00000365052 ADRA2BP18089 450 aa7.04□□□□□ -1.28
RNU1-43P-201ENST00000365052 PIP4K2AP48426 406 aaPredicted RBP7.04□□□□□ -1.28
RNU1-43P-201ENST00000365052 ZNF790Q6PG37 636 aa7.04□□□□□ -1.28
RNU1-43P-201ENST00000365052 BICDL1Q6ZP65 573 aa7.04□□□□□ -1.28
RNU1-43P-201ENST00000365052 BCS1LQ9Y276 419 aa7.04□□□□□ -1.28
RNU1-43P-201ENST00000365052 USP16Q9Y5T5 823 aa7.04□□□□□ -1.28
RNU1-43P-201ENST00000365052 CHD4Q14839 1912 aa7.03□□□□□ -1.28
RNU1-43P-201ENST00000365052 PRAMEF22A3QJZ6 481 aa7.03□□□□□ -1.28
RNU1-43P-201ENST00000365052 STARD3NLO95772 234 aa7.03□□□□□ -1.28
RNU1-43P-201ENST00000365052 NEFMP07197 916 aa7.03□□□□□ -1.28
RNU1-43P-201ENST00000365052 DPEP1P16444 411 aa7.03□□□□□ -1.28
RNU1-43P-201ENST00000365052 TM4SF1P30408 202 aa7.03□□□□□ -1.28
RNU1-43P-201ENST00000365052 ZEB1P37275 1124 aaPredicted RBP7.03□□□□□ -1.28
RNU1-43P-201ENST00000365052 ZNF526Q8TF50 670 aaPredicted RBP7.03□□□□□ -1.28
RNU1-43P-201ENST00000365052 FMNL2Q96PY5 1086 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms