RNA–Protein interactions for RNA: ENST00000361320.4

LRRTM3-201, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM3, Length 4,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-201ENST00000361320 CDC42BPBQ9Y5S2 1711 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 PER1O15534 1290 aaPredicted RBP8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 TRIM37O94972 964 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 TRAPPC3LQ5T215 181 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 ERC1Q8IUD2 1116 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 AFF2P51816 1311 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 ST5P78524 1137 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 LGR6Q9HBX8 967 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 DIP2CQ9Y2E4 1556 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 PDE3AQ14432 1141 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 KRT24Q2M2I5 525 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 ARHGEF25Q86VW2 580 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 TMEM57Q8N5G2 664 aa8.61□□□□□ -1.03
LRRTM3-201ENST00000361320 ZSCAN29Q8IWY8 852 aaPredicted RBP8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 CWC25Q9NXE8 425 aaPredicted RBP8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 PARP3Q9Y6F1 533 aa8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 ZKSCAN1P17029 563 aaPredicted RBP8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 SYNE3Q6ZMZ3 975 aa8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 UNC5CLQ8IV45 518 aa8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 SEPT12Q8IYM1 358 aa8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 KDM5CP41229 1560 aa8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 MAP3K5Q99683 1374 aa8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 IL13P35225 146 aa8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 KRT27Q7Z3Y8 459 aa8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 EXOC6BQ9Y2D4 811 aa8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 SPATA31A3Q5VYP0 1347 aa8.6□□□□□ -1.03
LRRTM3-201ENST00000361320 AACSQ86V21 672 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 PLXNC1O60486 1568 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 GLI2P10070 1586 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 HTATSF1O43719 755 aaKnown RBP8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 LDHAL6AQ6ZMR3 332 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 NLRP3Q96P20 1036 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 RAI14Q9P0K7 980 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 GCC2Q8IWJ2 1684 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 ADGRL3Q9HAR2 1447 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 ANKRD18BA2A2Z9 1011 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 RARSP54136 660 aaKnown RBP8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 AKAP17AQ02040 695 aaKnown RBP8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 MVPQ14764 893 aaKnown RBP8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 ZNF790Q6PG37 636 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 LRP2BPQ9P2M1 347 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 ZFYVE9O95405 1425 aa8.59□□□□□ -1.03
LRRTM3-201ENST00000361320 MARCH6O60337 910 aa8.59□□□□□ -1.04
LRRTM3-201ENST00000361320 CLSTN1O94985 981 aa8.59□□□□□ -1.04
LRRTM3-201ENST00000361320 IFIT1P09914 478 aaKnown RBP8.59□□□□□ -1.04
LRRTM3-201ENST00000361320 DNAJC10Q8IXB1 793 aa8.59□□□□□ -1.04
LRRTM3-201ENST00000361320 STK11IPQ8N1F8 1099 aa8.59□□□□□ -1.04
LRRTM3-201ENST00000361320 CDK11BP21127 795 aaKnown RBP8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 C8orf58Q8NAV2 365 aa8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 CDC5LQ99459 802 aaKnown RBP8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 LRRCC1Q9C099 1032 aa8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 RSPH6AQ9H0K4 717 aa8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 IDH1O75874 414 aaKnown RBP8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 SLC4A3P48751 1232 aa8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 IKQ13123 557 aaPredicted RBP8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 CAVIN4Q5BKX8 364 aa8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 POLR3AO14802 1390 aaPredicted RBP8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 FAM196AQ6ZSG2 479 aa8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 RALYLQ86SE5 291 aaKnown RBP8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 CARD10Q9BWT7 1032 aa8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 FOXD4L1Q9NU39 408 aa8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 FAM135BQ49AJ0 1406 aa8.58□□□□□ -1.04
LRRTM3-201ENST00000361320 TET3O43151 1660 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 REC8O95072 547 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 A1BGP04217 495 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 LRRFIP2Q9Y608 721 aaKnown RBP8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 ALDH1L2Q3SY69 923 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 NFXL1Q6ZNB6 911 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 TMOD2Q9NZR1 351 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 ARHGEF40Q8TER5 1519 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 ERICH2A1L162 156 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 RNF20Q5VTR2 975 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 PAXIP1Q6ZW49 1069 aaPredicted RBP8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 CNTROBQ8N137 903 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 AAMPQ13685 434 aa8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 RRP12Q5JTH9 1297 aaKnown RBP8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 CPLX2Q6PUV4 134 aaKnown RBP8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 CCAR1Q8IX12 1150 aaKnown RBP8.57□□□□□ -1.04
LRRTM3-201ENST00000361320 WDR17Q8IZU2 1322 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 MAP4K4O95819 1239 aaPredicted RBP8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 KCNQ4P56696 695 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 MSL1Q68DK7 614 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 CCDC24Q8N4L8 307 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 ZNF496Q96IT1 587 aaPredicted RBP8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 SLC52A2Q9HAB3 445 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 PARD3Q8TEW0 1356 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 MYOM2P54296 1465 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 RASSF8Q8NHQ8 419 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 SLKQ9H2G2 1235 aaPredicted RBP8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 CLTCQ00610 1675 aaKnown RBP8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 SBNO2Q9Y2G9 1366 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 USP6P35125 1406 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 CPLX1O14810 134 aa8.56□□□□□ -1.04
LRRTM3-201ENST00000361320 ST18O60284 1047 aa8.55□□□□□ -1.04
LRRTM3-201ENST00000361320 CCDC152Q4G0S7 254 aa8.55□□□□□ -1.04
LRRTM3-201ENST00000361320 RPAP2Q8IXW5 612 aaPredicted RBP8.55□□□□□ -1.04
LRRTM3-201ENST00000361320 AGLP35573 1532 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms