RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 TSPYL4Q9UJ04 414 aa22.07■■□□□ 1.12
LMNA-202ENST00000361308 ADAMTS7Q9UKP4 1686 aa22.07■■□□□ 1.12
LMNA-202ENST00000361308 SCN11AQ9UI33 1791 aa22.07■■□□□ 1.12
LMNA-202ENST00000361308 TRMT2AQ8IZ69 625 aaKnown RBP22.06■■□□□ 1.12
LMNA-202ENST00000361308 MBIPQ9NS73 344 aa22.06■■□□□ 1.12
LMNA-202ENST00000361308 TMOD3Q9NYL9 352 aa22.06■■□□□ 1.12
LMNA-202ENST00000361308 PRIM1P49642 420 aaKnown RBP22.06■■□□□ 1.12
LMNA-202ENST00000361308 TSR2Q969E8 191 aaKnown RBP22.06■■□□□ 1.12
LMNA-202ENST00000361308 ACSBG1Q96GR2 724 aa22.06■■□□□ 1.12
LMNA-202ENST00000361308 DUSP27Q5VZP5 1158 aa22.05■■□□□ 1.12
LMNA-202ENST00000361308 RGS12O14924 1447 aa22.04■■□□□ 1.12
LMNA-202ENST00000361308 FANCIQ9NVI1 1328 aa22.03■■□□□ 1.12
LMNA-202ENST00000361308 FAM196AQ6ZSG2 479 aa22.03■■□□□ 1.12
LMNA-202ENST00000361308 VIRMAQ69YN4 1812 aaKnown RBP22.02■■□□□ 1.12
LMNA-202ENST00000361308 PIGBQ92521 554 aa22.02■■□□□ 1.12
LMNA-202ENST00000361308 MRC1P22897 1456 aa22.02■■□□□ 1.12
LMNA-202ENST00000361308 BCL9O00512 1426 aa22.02■■□□□ 1.11
LMNA-202ENST00000361308 KAT6BQ8WYB5 2073 aa22.01■■□□□ 1.11
LMNA-202ENST00000361308 BRWD3Q6RI45 1802 aa22■■□□□ 1.11
LMNA-202ENST00000361308 KCNQ2O43526 872 aa22■■□□□ 1.11
LMNA-202ENST00000361308 CENPBP07199 599 aaPredicted RBP22■■□□□ 1.11
LMNA-202ENST00000361308 SLC39A6Q13433 755 aa22■■□□□ 1.11
LMNA-202ENST00000361308 ZNF790Q6PG37 636 aa22■■□□□ 1.11
LMNA-202ENST00000361308 TTC5Q8N0Z6 440 aa22■■□□□ 1.11
LMNA-202ENST00000361308 TOGARAM1Q9Y4F4 1720 aa21.99■■□□□ 1.11
LMNA-202ENST00000361308 KCNQ3O43525 872 aa21.98■■□□□ 1.11
LMNA-202ENST00000361308 EXOSC9Q06265 439 aaKnown RBP21.98■■□□□ 1.11
LMNA-202ENST00000361308 DOT1LQ8TEK3 1739 aa21.96■■□□□ 1.11
LMNA-202ENST00000361308 EIF4A1P60842 406 aaKnown RBP21.96■■□□□ 1.11
LMNA-202ENST00000361308 ASAP1Q9ULH1 1129 aa21.96■■□□□ 1.11
LMNA-202ENST00000361308 SIPA1L3O60292 1781 aaPredicted RBP21.96■■□□□ 1.11
LMNA-202ENST00000361308 ATG3Q9NT62 314 aa21.95■■□□□ 1.1
LMNA-202ENST00000361308 ITGB4P16144 1822 aa21.95■■□□□ 1.1
LMNA-202ENST00000361308 ELL2O00472 640 aaPredicted RBP21.94■■□□□ 1.1
LMNA-202ENST00000361308 C8orf58Q8NAV2 365 aa21.94■■□□□ 1.1
LMNA-202ENST00000361308 BCL11BQ9C0K0 894 aaPredicted RBP21.94■■□□□ 1.1
LMNA-202ENST00000361308 KRT24Q2M2I5 525 aa21.93■■□□□ 1.1
LMNA-202ENST00000361308 FMNL2Q96PY5 1086 aa21.93■■□□□ 1.1
LMNA-202ENST00000361308 TRIM37O94972 964 aa21.92■■□□□ 1.1
LMNA-202ENST00000361308 TWISTNBQ3B726 338 aaPredicted RBP21.92■■□□□ 1.1
LMNA-202ENST00000361308 PTF1AQ7RTS3 328 aa21.92■■□□□ 1.1
LMNA-202ENST00000361308 TSPYL6Q8N831 410 aa21.92■■□□□ 1.1
LMNA-202ENST00000361308 ZNF496Q96IT1 587 aaPredicted RBP21.92■■□□□ 1.1
LMNA-202ENST00000361308 PTCD1O75127 700 aaKnown RBP21.92■■□□□ 1.1
LMNA-202ENST00000361308 CT47B1P0C2W7 299 aaPredicted RBP21.91■■□□□ 1.1
LMNA-202ENST00000361308 SMARCC1Q92922 1105 aaPredicted RBP21.91■■□□□ 1.1
LMNA-202ENST00000361308 KDM3BQ7LBC6 1761 aa21.9■■□□□ 1.1
LMNA-202ENST00000361308 VAMP4O75379 141 aa21.89■■□□□ 1.1
LMNA-202ENST00000361308 RBM42Q9BTD8 480 aaKnown RBP21.89■■□□□ 1.1
LMNA-202ENST00000361308 GIGYF1O75420 1035 aaPredicted RBP21.89■■□□□ 1.09
LMNA-202ENST00000361308 SNRPA1P09661 255 aaKnown RBP21.88■■□□□ 1.09
LMNA-202ENST00000361308 SOS1Q07889 1333 aaPredicted RBP21.88■■□□□ 1.09
LMNA-202ENST00000361308 NHSQ6T4R5 1651 aa21.87■■□□□ 1.09
LMNA-202ENST00000361308 HEG1Q9ULI3 1381 aa21.87■■□□□ 1.09
LMNA-202ENST00000361308 SBF2Q86WG5 1849 aa21.87■■□□□ 1.09
LMNA-202ENST00000361308 HOXB7P09629 217 aa21.86■■□□□ 1.09
LMNA-202ENST00000361308 ZNF428Q96B54 188 aa21.86■■□□□ 1.09
LMNA-202ENST00000361308 PALLDQ8WX93 1383 aa21.86■■□□□ 1.09
LMNA-202ENST00000361308 VSIG10Q8N0Z9 540 aa21.86■■□□□ 1.09
LMNA-202ENST00000361308 CHMP4AQ9BY43 222 aa21.86■■□□□ 1.09
LMNA-202ENST00000361308 RCAN3Q9UKA8 241 aa21.86■■□□□ 1.09
LMNA-202ENST00000361308 PRAMEF22A3QJZ6 481 aa21.84■■□□□ 1.09
LMNA-202ENST00000361308 EIF2S2P20042 333 aaKnown RBP21.84■■□□□ 1.09
LMNA-202ENST00000361308 PAPPAQ13219 1627 aa21.84■■□□□ 1.09
LMNA-202ENST00000361308 KCPQ6ZWJ8 1503 aa21.84■■□□□ 1.09
LMNA-202ENST00000361308 LOC102724428A0A0B4J2F2 783 aa21.83■■□□□ 1.09
LMNA-202ENST00000361308 SIK1P57059 783 aa21.83■■□□□ 1.09
LMNA-202ENST00000361308 TEX13AQ9BXU3 409 aaPredicted RBP21.83■■□□□ 1.09
LMNA-202ENST00000361308 EP400Q96L91 3159 aa21.83■■□□□ 1.08
LMNA-202ENST00000361308 HDGFL1Q5TGJ6 251 aa21.83■■□□□ 1.08
LMNA-202ENST00000361308 ATP6V1AP38606 617 aa21.82■■□□□ 1.08
LMNA-202ENST00000361308 CCDC30Q5VVM6 783 aa21.82■■□□□ 1.08
LMNA-202ENST00000361308 USP16Q9Y5T5 823 aa21.82■■□□□ 1.08
LMNA-202ENST00000361308 BTAF1O14981 1849 aa21.82■■□□□ 1.08
LMNA-202ENST00000361308 APBA3O96018 575 aa21.81■■□□□ 1.08
LMNA-202ENST00000361308 RARSP54136 660 aaKnown RBP21.81■■□□□ 1.08
LMNA-202ENST00000361308 NECTIN2Q92692 538 aa21.81■■□□□ 1.08
LMNA-202ENST00000361308 SLC4A9Q96Q91 983 aa21.81■■□□□ 1.08
LMNA-202ENST00000361308 UBR2Q8IWV8 1755 aa21.81■■□□□ 1.08
LMNA-202ENST00000361308 ALDH1L2Q3SY69 923 aa21.8■■□□□ 1.08
LMNA-202ENST00000361308 DNAJC10Q8IXB1 793 aa21.8■■□□□ 1.08
LMNA-202ENST00000361308 TCERG1O14776 1098 aaKnown RBP21.79■■□□□ 1.08
LMNA-202ENST00000361308 SSH1Q8WYL5 1049 aa21.79■■□□□ 1.08
LMNA-202ENST00000361308 BCL2L13Q9BXK5 485 aa21.79■■□□□ 1.08
LMNA-202ENST00000361308 STK31Q9BXU1 1019 aa21.79■■□□□ 1.08
LMNA-202ENST00000361308 STARD3NLO95772 234 aa21.78■■□□□ 1.08
LMNA-202ENST00000361308 SMC4Q9NTJ3 1288 aa21.78■■□□□ 1.08
LMNA-202ENST00000361308 PLSCR1O15162 318 aa21.77■■□□□ 1.08
LMNA-202ENST00000361308 BCAR3O75815 825 aa21.77■■□□□ 1.08
LMNA-202ENST00000361308 CCNL1Q9UK58 526 aaPredicted RBP21.77■■□□□ 1.08
LMNA-202ENST00000361308 SF3B2Q13435 895 aaKnown RBP21.77■■□□□ 1.08
LMNA-202ENST00000361308 SLC4A2P04920 1241 aa21.76■■□□□ 1.07
LMNA-202ENST00000361308 DBF4Q9UBU7 674 aaPredicted RBP21.76■■□□□ 1.07
LMNA-202ENST00000361308 KCNQ4P56696 695 aa21.75■■□□□ 1.07
LMNA-202ENST00000361308 ITPK1Q13572 414 aa21.75■■□□□ 1.07
LMNA-202ENST00000361308 CHPF2Q9P2E5 772 aa21.75■■□□□ 1.07
LMNA-202ENST00000361308 CYP19A1P11511 503 aaPredicted RBP21.74■■□□□ 1.07
LMNA-202ENST00000361308 SLC27A3Q5K4L6 730 aa21.74■■□□□ 1.07
LMNA-202ENST00000361308 MRPL50Q8N5N7 158 aaKnown RBP21.74■■□□□ 1.07
LMNA-202ENST00000361308 SUPT16HQ9Y5B9 1047 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms