RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 CSPP1Q1MSJ5 1256 aa15□□□□□ -0.01
RBM39-203ENST00000361162 GSPT1P15170 499 aaKnown RBP14.99□□□□□ -0.01
RBM39-203ENST00000361162 PNPLA6Q8IY17 1366 aa14.99□□□□□ -0.01
RBM39-203ENST00000361162 CDC45O75419 566 aa14.98□□□□□ -0.01
RBM39-203ENST00000361162 SAFB2Q14151 953 aaKnown RBP eCLIP14.98□□□□□ -0.01
RBM39-203ENST00000361162 CCDC39Q9UFE4 941 aa14.98□□□□□ -0.01
RBM39-203ENST00000361162 RGPD1P0DJD0 1748 aa14.98□□□□□ -0.01
RBM39-203ENST00000361162 ZBTB7BO15156 539 aaPredicted RBP14.98□□□□□ -0.01
RBM39-203ENST00000361162 IGSF3O75054 1194 aa14.98□□□□□ -0.01
RBM39-203ENST00000361162 CYP2E1P05181 493 aaPredicted RBP14.98□□□□□ -0.01
RBM39-203ENST00000361162 LRSAM1Q6UWE0 723 aa14.98□□□□□ -0.01
RBM39-203ENST00000361162 CCDC94Q9BW85 323 aaPredicted RBP14.98□□□□□ -0.01
RBM39-203ENST00000361162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.98□□□□□ -0.01
RBM39-203ENST00000361162 ZSCAN20P17040 1043 aaPredicted RBP14.98□□□□□ -0.01
RBM39-203ENST00000361162 THUMPD2Q9BTF0 503 aaKnown RBP14.97□□□□□ -0.01
RBM39-203ENST00000361162 C19orf44Q9H6X5 657 aa14.97□□□□□ -0.01
RBM39-203ENST00000361162 CT47B1P0C2W7 299 aaPredicted RBP14.97□□□□□ -0.01
RBM39-203ENST00000361162 RABEP1Q15276 862 aa14.97□□□□□ -0.01
RBM39-203ENST00000361162 NOL8Q76FK4 1167 aaKnown RBP14.97□□□□□ -0.01
RBM39-203ENST00000361162 OTUD7AQ8TE49 926 aaPredicted RBP14.97□□□□□ -0.01
RBM39-203ENST00000361162 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
RBM39-203ENST00000361162 CAMTA1Q9Y6Y1 1673 aa14.96□□□□□ -0.01
RBM39-203ENST00000361162 FAM208AQ9UK61 1670 aaKnown RBP14.96□□□□□ -0.01
RBM39-203ENST00000361162 SBNO1A3KN83 1393 aa14.96□□□□□ -0.02
RBM39-203ENST00000361162 ZNF710Q8N1W2 664 aa14.96□□□□□ -0.02
RBM39-203ENST00000361162 PLEKHF1Q96S99 279 aa14.96□□□□□ -0.02
RBM39-203ENST00000361162 AHDC1Q5TGY3 1603 aaPredicted RBP14.95□□□□□ -0.02
RBM39-203ENST00000361162 MSH6P52701 1360 aa14.95□□□□□ -0.02
RBM39-203ENST00000361162 TMEM94Q12767 1356 aa14.95□□□□□ -0.02
RBM39-203ENST00000361162 PLEKHG2Q9H7P9 1386 aa14.95□□□□□ -0.02
RBM39-203ENST00000361162 SPDYE4A6NLX3 237 aa14.95□□□□□ -0.02
RBM39-203ENST00000361162 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
RBM39-203ENST00000361162 MTERF4Q7Z6M4 381 aaKnown RBP14.95□□□□□ -0.02
RBM39-203ENST00000361162 USP26Q9BXU7 913 aa14.95□□□□□ -0.02
RBM39-203ENST00000361162 CABP1Q9NZU7 370 aa14.95□□□□□ -0.02
RBM39-203ENST00000361162 GCC1Q96CN9 775 aa14.95□□□□□ -0.02
RBM39-203ENST00000361162 GDPD2Q9HCC8 539 aa14.95□□□□□ -0.02
RBM39-203ENST00000361162 RTL1A6NKG5 1358 aa14.94□□□□□ -0.02
RBM39-203ENST00000361162 DMTNQ08495 405 aa14.94□□□□□ -0.02
RBM39-203ENST00000361162 TSPYL6Q8N831 410 aa14.94□□□□□ -0.02
RBM39-203ENST00000361162 NFAT5O94916 1531 aa14.94□□□□□ -0.02
RBM39-203ENST00000361162 MAP2P11137 1827 aaKnown RBP14.94□□□□□ -0.02
RBM39-203ENST00000361162 KIAA2012Q0VF49 1180 aa14.94□□□□□ -0.02
RBM39-203ENST00000361162 ATP2B3Q16720 1220 aa14.94□□□□□ -0.02
RBM39-203ENST00000361162 PLEKHM2Q8IWE5 1019 aa14.94□□□□□ -0.02
RBM39-203ENST00000361162 TTC12Q9H892 705 aaPredicted RBP14.94□□□□□ -0.02
RBM39-203ENST00000361162 COL22A1Q8NFW1 1626 aaPredicted RBP14.94□□□□□ -0.02
RBM39-203ENST00000361162 PPP4R3BQ5MIZ7 849 aa14.93□□□□□ -0.02
RBM39-203ENST00000361162 ABCA3Q99758 1704 aa14.93□□□□□ -0.02
RBM39-203ENST00000361162 PXDNQ92626 1479 aa14.93□□□□□ -0.02
RBM39-203ENST00000361162 FBLN1P23142 703 aa14.93□□□□□ -0.02
RBM39-203ENST00000361162 MCM5P33992 734 aa14.93□□□□□ -0.02
RBM39-203ENST00000361162 ACEP12821 1306 aa14.92□□□□□ -0.02
RBM39-203ENST00000361162 TTC21BQ7Z4L5 1316 aa14.92□□□□□ -0.02
RBM39-203ENST00000361162 CADPS2Q86UW7 1296 aa14.92□□□□□ -0.02
RBM39-203ENST00000361162 MYRIPQ8NFW9 859 aa14.92□□□□□ -0.02
RBM39-203ENST00000361162 FYB1O15117 783 aa14.92□□□□□ -0.02
RBM39-203ENST00000361162 SMARCA5O60264 1052 aaPredicted RBP14.92□□□□□ -0.02
RBM39-203ENST00000361162 PLCB2Q00722 1185 aa14.91□□□□□ -0.02
RBM39-203ENST00000361162 LTN1O94822 1766 aa14.9□□□□□ -0.02
RBM39-203ENST00000361162 PROSER2Q86WR7 435 aaPredicted RBP14.9□□□□□ -0.02
RBM39-203ENST00000361162 USP25Q9UHP3 1055 aa14.9□□□□□ -0.02
RBM39-203ENST00000361162 PEAK1Q9H792 1746 aa14.9□□□□□ -0.02
RBM39-203ENST00000361162 TSPY26PQ9H489 355 aa14.9□□□□□ -0.02
RBM39-203ENST00000361162 ST18O60284 1047 aa14.89□□□□□ -0.03
RBM39-203ENST00000361162 CWC22Q9HCG8 908 aaKnown RBP14.89□□□□□ -0.03
RBM39-203ENST00000361162 GADD45BO75293 160 aaPredicted RBP14.89□□□□□ -0.03
RBM39-203ENST00000361162 NOLC1Q14978 699 aaKnown RBP eCLIP14.89□□□□□ -0.03
RBM39-203ENST00000361162 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
RBM39-203ENST00000361162 SDSP20132 328 aa14.88□□□□□ -0.03
RBM39-203ENST00000361162 NEK4P51957 841 aa14.88□□□□□ -0.03
RBM39-203ENST00000361162 TTC22Q5TAA0 569 aa14.88□□□□□ -0.03
RBM39-203ENST00000361162 LMO7Q8WWI1 1683 aa14.88□□□□□ -0.03
RBM39-203ENST00000361162 FGD1P98174 961 aa14.87□□□□□ -0.03
RBM39-203ENST00000361162 MRPL50Q8N5N7 158 aaKnown RBP14.87□□□□□ -0.03
RBM39-203ENST00000361162 VAMP4O75379 141 aa14.87□□□□□ -0.03
RBM39-203ENST00000361162 HSPA2P54652 639 aa14.87□□□□□ -0.03
RBM39-203ENST00000361162 ALDH1L2Q3SY69 923 aa14.87□□□□□ -0.03
RBM39-203ENST00000361162 UTP14CQ5TAP6 766 aaKnown RBP14.87□□□□□ -0.03
RBM39-203ENST00000361162 INTS3Q68E01 1043 aaKnown RBP14.86□□□□□ -0.03
RBM39-203ENST00000361162 BCL11BQ9C0K0 894 aaPredicted RBP14.86□□□□□ -0.03
RBM39-203ENST00000361162 HMOX1P09601 288 aa14.85□□□□□ -0.03
RBM39-203ENST00000361162 TMX3Q96JJ7 454 aa14.85□□□□□ -0.03
RBM39-203ENST00000361162 DTNBO60941 627 aa14.85□□□□□ -0.03
RBM39-203ENST00000361162 BCL2L12Q9HB09 334 aa14.85□□□□□ -0.03
RBM39-203ENST00000361162 KIF3AQ9Y496 699 aa14.85□□□□□ -0.03
RBM39-203ENST00000361162 NCAPD2Q15021 1401 aa14.85□□□□□ -0.03
RBM39-203ENST00000361162 TNS3Q68CZ2 1445 aa14.85□□□□□ -0.03
RBM39-203ENST00000361162 ADCY5O95622 1261 aa14.84□□□□□ -0.03
RBM39-203ENST00000361162 U2AF2P26368 475 aaKnown RBP eCLIP14.84□□□□□ -0.032e-8■■□□□ 13.9
RBM39-203ENST00000361162 ARHGEF10O15013 1369 aa14.84□□□□□ -0.03
RBM39-203ENST00000361162 PRKAR2BP31323 418 aa14.84□□□□□ -0.03
RBM39-203ENST00000361162 TSHZ3Q63HK5 1081 aa14.84□□□□□ -0.03
RBM39-203ENST00000361162 PIBF1Q8WXW3 757 aa14.84□□□□□ -0.03
RBM39-203ENST00000361162 COG3Q96JB2 828 aa14.84□□□□□ -0.03
RBM39-203ENST00000361162 PHACTR3Q96KR7 559 aa14.84□□□□□ -0.03
RBM39-203ENST00000361162 MBD3O95983 291 aa14.84□□□□□ -0.03
RBM39-203ENST00000361162 ATF3P18847 181 aa14.84□□□□□ -0.03
RBM39-203ENST00000361162 IL16Q14005 1332 aa14.83□□□□□ -0.04
RBM39-203ENST00000361162 DIAPH1O60610 1272 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms