RNA–Protein interactions for RNA: ENST00000360831.9

NLE1-201, Transcript of notchless homolog 1, humanhuman

TSL 5 BASIC

Gene NLE1, Length 1,726 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-201ENST00000360831 SMC5Q8IY18 1101 aa22.94■■□□□ 1.26
NLE1-201ENST00000360831 ARHGAP45Q92619 1136 aa22.94■■□□□ 1.26
NLE1-201ENST00000360831 CRB1P82279 1406 aa22.93■■□□□ 1.26
NLE1-201ENST00000360831 MRPL50Q8N5N7 158 aaKnown RBP22.93■■□□□ 1.26
NLE1-201ENST00000360831 SPATA31A1Q5TZJ5 1347 aa22.92■■□□□ 1.26
NLE1-201ENST00000360831 NLRP2Q9NX02 1062 aa22.92■■□□□ 1.26
NLE1-201ENST00000360831 THUMPD2Q9BTF0 503 aaKnown RBP22.89■■□□□ 1.26
NLE1-201ENST00000360831 CARD10Q9BWT7 1032 aa22.89■■□□□ 1.26
NLE1-201ENST00000360831 CHMP4BQ9H444 224 aaKnown RBP22.89■■□□□ 1.26
NLE1-201ENST00000360831 GLI3P10071 1580 aa22.89■■□□□ 1.25
NLE1-201ENST00000360831 EIF4A2Q14240 407 aaKnown RBP22.88■■□□□ 1.25
NLE1-201ENST00000360831 CFAP44Q96MT7 982 aa22.88■■□□□ 1.25
NLE1-201ENST00000360831 MBIPQ9NS73 344 aa22.88■■□□□ 1.25
NLE1-201ENST00000360831 FAM98CQ17RN3 349 aaKnown RBP22.87■■□□□ 1.25
NLE1-201ENST00000360831 TBC1D32Q96NH3 1257 aa22.87■■□□□ 1.25
NLE1-201ENST00000360831 UPF2Q9HAU5 1272 aaKnown RBP22.87■■□□□ 1.25
NLE1-201ENST00000360831 THRAP3Q9Y2W1 955 aaKnown RBP22.87■■□□□ 1.25
NLE1-201ENST00000360831 NBPF6Q5VWK0 638 aa22.86■■□□□ 1.25
NLE1-201ENST00000360831 NBPF4Q96M43 638 aa22.86■■□□□ 1.25
NLE1-201ENST00000360831 BECN1Q14457 450 aa22.85■■□□□ 1.25
NLE1-201ENST00000360831 NFKBIBQ15653 356 aa22.85■■□□□ 1.25
NLE1-201ENST00000360831 BARGINQ6ZT62 677 aa22.85■■□□□ 1.25
NLE1-201ENST00000360831 TSPYL6Q8N831 410 aa22.85■■□□□ 1.25
NLE1-201ENST00000360831 BCL11AQ9H165 835 aa22.85■■□□□ 1.25
NLE1-201ENST00000360831 FAM208AQ9UK61 1670 aaKnown RBP22.84■■□□□ 1.25
NLE1-201ENST00000360831 ONECUT3O60422 494 aaPredicted RBP22.83■■□□□ 1.25
NLE1-201ENST00000360831 A0A0G2JS52 829 aa22.82■■□□□ 1.24
NLE1-201ENST00000360831 ZBTB7BO15156 539 aaPredicted RBP22.82■■□□□ 1.24
NLE1-201ENST00000360831 NUCB1Q02818 461 aa22.82■■□□□ 1.24
NLE1-201ENST00000360831 USHBP1Q8N6Y0 703 aa22.82■■□□□ 1.24
NLE1-201ENST00000360831 EYA1Q99502 592 aa22.82■■□□□ 1.24
NLE1-201ENST00000360831 DLG5Q8TDM6 1919 aa22.82■■□□□ 1.24
NLE1-201ENST00000360831 TWISTNBQ3B726 338 aaPredicted RBP22.82■■□□□ 1.24
NLE1-201ENST00000360831 ABCC4O15439 1325 aa22.82■■□□□ 1.24
NLE1-201ENST00000360831 RGPD2P0DJD1 1756 aa22.81■■□□□ 1.24
NLE1-201ENST00000360831 SEPT12Q8IYM1 358 aa22.8■■□□□ 1.24
NLE1-201ENST00000360831 C8orf58Q8NAV2 365 aa22.8■■□□□ 1.24
NLE1-201ENST00000360831 API5Q9BZZ5 524 aaKnown RBP22.8■■□□□ 1.24
NLE1-201ENST00000360831 RGS12O14924 1447 aa22.79■■□□□ 1.24
NLE1-201ENST00000360831 IL2RBP14784 551 aa22.78■■□□□ 1.24
NLE1-201ENST00000360831 CDCA7Q9BWT1 371 aaPredicted RBP22.78■■□□□ 1.24
NLE1-201ENST00000360831 IGSF1Q8N6C5 1336 aa22.77■■□□□ 1.24
NLE1-201ENST00000360831 SULT6B1Q6IMI4 303 aa22.77■■□□□ 1.24
NLE1-201ENST00000360831 AEBP1Q8IUX7 1158 aa22.77■■□□□ 1.24
NLE1-201ENST00000360831 RGPD1P0DJD0 1748 aa22.76■■□□□ 1.23
NLE1-201ENST00000360831 GCC1Q96CN9 775 aa22.76■■□□□ 1.23
NLE1-201ENST00000360831 DISP2A7MBM2 1401 aa22.76■■□□□ 1.23
NLE1-201ENST00000360831 CHL1O00533 1208 aa22.75■■□□□ 1.23
NLE1-201ENST00000360831 CHD1LQ86WJ1 897 aa22.75■■□□□ 1.23
NLE1-201ENST00000360831 RAPGEF4Q8WZA2 1011 aa22.75■■□□□ 1.23
NLE1-201ENST00000360831 THSD7AQ9UPZ6 1657 aa22.75■■□□□ 1.23
NLE1-201ENST00000360831 ELL2O00472 640 aaPredicted RBP22.74■■□□□ 1.23
NLE1-201ENST00000360831 NCAPD2Q15021 1401 aa22.74■■□□□ 1.23
NLE1-201ENST00000360831 DCTN1Q14203 1278 aa22.74■■□□□ 1.23
NLE1-201ENST00000360831 ILDR2Q71H61 639 aa22.74■■□□□ 1.23
NLE1-201ENST00000360831 TATP17735 454 aaPredicted RBP22.72■■□□□ 1.23
NLE1-201ENST00000360831 DDB1Q16531 1140 aa22.72■■□□□ 1.23
NLE1-201ENST00000360831 WNK3Q9BYP7 1800 aa22.72■■□□□ 1.23
NLE1-201ENST00000360831 EXOC5O00471 708 aa22.71■■□□□ 1.23
NLE1-201ENST00000360831 MEGF6O75095 1541 aa22.71■■□□□ 1.23
NLE1-201ENST00000360831 C22orf23Q9BZE7 217 aa22.71■■□□□ 1.23
NLE1-201ENST00000360831 PARP4Q9UKK3 1724 aaKnown RBP22.7■■□□□ 1.22
NLE1-201ENST00000360831 KRT27Q7Z3Y8 459 aa22.7■■□□□ 1.22
NLE1-201ENST00000360831 TBC1D2Q9BYX2 928 aa22.7■■□□□ 1.22
NLE1-201ENST00000360831 LNPKQ9C0E8 428 aa22.69■■□□□ 1.22
NLE1-201ENST00000360831 KDRP35968 1356 aa22.69■■□□□ 1.22
NLE1-201ENST00000360831 INTS3Q68E01 1043 aaKnown RBP22.68■■□□□ 1.22
NLE1-201ENST00000360831 SIRT2Q8IXJ6 389 aa22.68■■□□□ 1.22
NLE1-201ENST00000360831 ANTXR1Q9H6X2 564 aa22.68■■□□□ 1.22
NLE1-201ENST00000360831 OVOS2A0A0G2JMS6 1433 aa22.68■■□□□ 1.22
NLE1-201ENST00000360831 BMP2KLQ5H9B9 411 aa22.68■■□□□ 1.22
NLE1-201ENST00000360831 LRRC37A3O60309 1634 aa22.67■■□□□ 1.22
NLE1-201ENST00000360831 FRAT2O75474 233 aaPredicted RBP22.67■■□□□ 1.22
NLE1-201ENST00000360831 ZCRB1Q8TBF4 217 aaKnown RBP22.67■■□□□ 1.22
NLE1-201ENST00000360831 BRWD3Q6RI45 1802 aa22.66■■□□□ 1.22
NLE1-201ENST00000360831 MFAP1P55081 439 aaKnown RBP22.66■■□□□ 1.22
NLE1-201ENST00000360831 GSE1Q14687 1217 aa22.66■■□□□ 1.22
NLE1-201ENST00000360831 ANKRD45Q5TZF3 282 aa22.66■■□□□ 1.22
NLE1-201ENST00000360831 C1orf115Q9H7X2 142 aa22.66■■□□□ 1.22
NLE1-201ENST00000360831 TNS2Q63HR2 1409 aa22.66■■□□□ 1.22
NLE1-201ENST00000360831 MCM10Q7L590 875 aa22.64■■□□□ 1.21
NLE1-201ENST00000360831 FAM182BQ5T319 152 aa22.63■■□□□ 1.21
NLE1-201ENST00000360831 DDX54Q8TDD1 881 aaKnown RBP22.63■■□□□ 1.21
NLE1-201ENST00000360831 MARCH10Q8NA82 808 aaPredicted RBP22.62■■□□□ 1.21
NLE1-201ENST00000360831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.62■■□□□ 1.21
NLE1-201ENST00000360831 SPG7Q9UQ90 795 aa22.62■■□□□ 1.21
NLE1-201ENST00000360831 PTPRCP08575 1304 aa22.62■■□□□ 1.21
NLE1-201ENST00000360831 RBM25P49756 843 aaKnown RBP22.62■■□□□ 1.21
NLE1-201ENST00000360831 PLEKHG2Q9H7P9 1386 aa22.61■■□□□ 1.21
NLE1-201ENST00000360831 PLEKHO1Q53GL0 409 aaPredicted RBP22.61■■□□□ 1.21
NLE1-201ENST00000360831 DCTPP1Q9H773 170 aa22.6■■□□□ 1.21
NLE1-201ENST00000360831 PCDH11XQ9BZA7 1347 aa22.6■■□□□ 1.21
NLE1-201ENST00000360831 PCDH11YQ9BZA8 1340 aa22.6■■□□□ 1.21
NLE1-201ENST00000360831 HTATSF1O43719 755 aaKnown RBP22.6■■□□□ 1.21
NLE1-201ENST00000360831 MTHFSDQ2M296 383 aaKnown RBP22.6■■□□□ 1.21
NLE1-201ENST00000360831 KRT24Q2M2I5 525 aa22.6■■□□□ 1.21
NLE1-201ENST00000360831 AMOTQ4VCS5 1084 aa22.6■■□□□ 1.21
NLE1-201ENST00000360831 ANKRD44Q8N8A2 993 aa22.59■■□□□ 1.21
NLE1-201ENST00000360831 GAS2L2Q8NHY3 880 aa22.59■■□□□ 1.21
NLE1-201ENST00000360831 SLKQ9H2G2 1235 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms