RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 NPC1L1Q9UHC9 1359 aa9.63□□□□□ -0.87
CLCN3-202ENST00000360642 ABCA6Q8N139 1617 aa9.63□□□□□ -0.87
CLCN3-202ENST00000360642 KIF1BO60333 1816 aa9.63□□□□□ -0.87
CLCN3-202ENST00000360642 GCGRP47871 477 aa9.63□□□□□ -0.87
CLCN3-202ENST00000360642 KNSTRNQ9Y448 316 aa9.63□□□□□ -0.87
CLCN3-202ENST00000360642 ASXL1Q8IXJ9 1541 aa9.63□□□□□ -0.87
CLCN3-202ENST00000360642 FBXO45P0C2W1 286 aa9.62□□□□□ -0.87
CLCN3-202ENST00000360642 POTEJP0CG39 1038 aa9.62□□□□□ -0.87
CLCN3-202ENST00000360642 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
CLCN3-202ENST00000360642 MROH2AA6NES4 1674 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 SEMA3FQ13275 785 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 KIAA1468Q9P260 1216 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 ADGRF5Q8IZF2 1346 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 KDM5AP29375 1690 aaKnown RBP9.61□□□□□ -0.87
CLCN3-202ENST00000360642 TRIM6-TRIM34B2RNG4 842 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 ANO2Q9NQ90 1003 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 FRMPD1Q5SYB0 1578 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 PIK3C2GO75747 1445 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 FAM174AQ8TBP5 190 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 ZNF594Q96JF6 807 aaPredicted RBP9.61□□□□□ -0.87
CLCN3-202ENST00000360642 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 ERVK-7P63135 1459 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 MLH3Q9UHC1 1453 aa9.61□□□□□ -0.87
CLCN3-202ENST00000360642 CFAP74Q9C0B2 1584 aa9.6□□□□□ -0.87
CLCN3-202ENST00000360642 POGZQ7Z3K3 1410 aa9.6□□□□□ -0.87
CLCN3-202ENST00000360642 MYO3AQ8NEV4 1616 aa9.6□□□□□ -0.87
CLCN3-202ENST00000360642 USTQ9Y2C2 406 aa9.6□□□□□ -0.87
CLCN3-202ENST00000360642 ADGRB3O60242 1522 aa9.6□□□□□ -0.87
CLCN3-202ENST00000360642 KCNA1Q09470 495 aa9.6□□□□□ -0.87
CLCN3-202ENST00000360642 NBPF26B4DH59 902 aa9.6□□□□□ -0.87
CLCN3-202ENST00000360642 SETBP1Q9Y6X0 1596 aa9.59□□□□□ -0.87
CLCN3-202ENST00000360642 EXOC6Q8TAG9 804 aa9.59□□□□□ -0.87
CLCN3-202ENST00000360642 KIAA1522Q9P206 1035 aaPredicted RBP9.59□□□□□ -0.87
CLCN3-202ENST00000360642 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
CLCN3-202ENST00000360642 CD109Q6YHK3 1445 aa9.59□□□□□ -0.87
CLCN3-202ENST00000360642 SLC39A7Q92504 469 aa9.59□□□□□ -0.87
CLCN3-202ENST00000360642 MAP10Q9P2G4 905 aa9.59□□□□□ -0.87
CLCN3-202ENST00000360642 WASHC4Q2M389 1173 aa9.58□□□□□ -0.88
CLCN3-202ENST00000360642 PTPREP23469 700 aa9.58□□□□□ -0.88
CLCN3-202ENST00000360642 ZNF521Q96K83 1311 aa9.58□□□□□ -0.88
CLCN3-202ENST00000360642 NPATQ14207 1427 aa9.58□□□□□ -0.88
CLCN3-202ENST00000360642 HECW2Q9P2P5 1572 aa9.58□□□□□ -0.88
CLCN3-202ENST00000360642 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
CLCN3-202ENST00000360642 MTMR3Q13615 1198 aa9.57□□□□□ -0.88
CLCN3-202ENST00000360642 TSGA10IPQ3SY00 556 aa9.57□□□□□ -0.88
CLCN3-202ENST00000360642 PLEKHH1Q9ULM0 1364 aa9.57□□□□□ -0.88
CLCN3-202ENST00000360642 PPP1R3GB7ZBB8 358 aa9.57□□□□□ -0.88
CLCN3-202ENST00000360642 NOS1P29475 1434 aa9.56□□□□□ -0.88
CLCN3-202ENST00000360642 PPLO60437 1756 aa9.56□□□□□ -0.88
CLCN3-202ENST00000360642 PRPF38BQ5VTL8 546 aaKnown RBP9.56□□□□□ -0.88
CLCN3-202ENST00000360642 RNF19BQ6ZMZ0 732 aa9.56□□□□□ -0.88
CLCN3-202ENST00000360642 POTEB2H3BUK9 544 aa9.56□□□□□ -0.88
CLCN3-202ENST00000360642 C7P10643 843 aa9.56□□□□□ -0.88
CLCN3-202ENST00000360642 CARD14Q9BXL6 1004 aa9.56□□□□□ -0.88
CLCN3-202ENST00000360642 WDR43Q15061 677 aaKnown RBP eCLIP9.56□□□□□ -0.88
CLCN3-202ENST00000360642 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 CFHP08603 1231 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 SKIP12755 728 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 NCOA4Q13772 614 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 USP17L2Q6R6M4 530 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 USP17L1Q7RTZ2 530 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 NOVA2Q9UNW9 492 aaKnown RBP9.55□□□□□ -0.88
CLCN3-202ENST00000360642 ADGRB1O14514 1584 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 ABCC3O15438 1527 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 DUSP27Q5VZP5 1158 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 SAMD7Q7Z3H4 446 aa9.55□□□□□ -0.88
CLCN3-202ENST00000360642 C14orf93Q9H972 538 aaKnown RBP9.55□□□□□ -0.88
CLCN3-202ENST00000360642 RPGRIP1LQ68CZ1 1315 aa9.54□□□□□ -0.88
CLCN3-202ENST00000360642 ATG7O95352 703 aa9.54□□□□□ -0.88
CLCN3-202ENST00000360642 PACS2Q86VP3 889 aa9.54□□□□□ -0.88
CLCN3-202ENST00000360642 MRRFQ96E11 262 aaKnown RBP9.54□□□□□ -0.88
CLCN3-202ENST00000360642 ZC3H13Q5T200 1668 aaKnown RBP9.54□□□□□ -0.88
CLCN3-202ENST00000360642 NEO1Q92859 1461 aa9.54□□□□□ -0.88
CLCN3-202ENST00000360642 ATP9BO43861 1147 aa9.53□□□□□ -0.88
CLCN3-202ENST00000360642 TUSC1Q2TAM9 212 aa9.53□□□□□ -0.88
CLCN3-202ENST00000360642 PPP4R3BQ5MIZ7 849 aa9.53□□□□□ -0.88
CLCN3-202ENST00000360642 BLOC1S3Q6QNY0 202 aa9.53□□□□□ -0.88
CLCN3-202ENST00000360642 TRMT2AQ8IZ69 625 aaKnown RBP9.53□□□□□ -0.88
CLCN3-202ENST00000360642 CENPJQ9HC77 1338 aaPredicted RBP9.53□□□□□ -0.88
CLCN3-202ENST00000360642 PIK3C2BO00750 1634 aa9.53□□□□□ -0.88
CLCN3-202ENST00000360642 PLIN1O60240 522 aa9.53□□□□□ -0.88
CLCN3-202ENST00000360642 CAPN12Q6ZSI9 719 aa9.53□□□□□ -0.88
CLCN3-202ENST00000360642 CAMSAP1Q5T5Y3 1602 aa9.53□□□□□ -0.88
CLCN3-202ENST00000360642 GGT6Q6P531 493 aa9.52□□□□□ -0.88
CLCN3-202ENST00000360642 SIGLEC1Q9BZZ2 1709 aa9.52□□□□□ -0.88
CLCN3-202ENST00000360642 USP17L5A8MUK1 530 aa9.52□□□□□ -0.89
CLCN3-202ENST00000360642 BIN2Q9UBW5 565 aaPredicted RBP9.52□□□□□ -0.89
CLCN3-202ENST00000360642 SLC27A5Q9Y2P5 690 aa9.52□□□□□ -0.89
CLCN3-202ENST00000360642 TCERG1O14776 1098 aaKnown RBP9.51□□□□□ -0.89
CLCN3-202ENST00000360642 SLFN5Q08AF3 891 aa9.51□□□□□ -0.89
CLCN3-202ENST00000360642 ZNF211Q13398 564 aaPredicted RBP9.51□□□□□ -0.89
CLCN3-202ENST00000360642 TXNDC2Q86VQ3 553 aa9.51□□□□□ -0.89
CLCN3-202ENST00000360642 QRICH2Q9H0J4 1663 aa9.51□□□□□ -0.89
CLCN3-202ENST00000360642 GIPC2Q8TF65 315 aa9.51□□□□□ -0.89
CLCN3-202ENST00000360642 CRBNQ96SW2 442 aa9.51□□□□□ -0.89
CLCN3-202ENST00000360642 POLR3AO14802 1390 aaPredicted RBP9.51□□□□□ -0.89
CLCN3-202ENST00000360642 DIP2CQ9Y2E4 1556 aa9.51□□□□□ -0.89
CLCN3-202ENST00000360642 ARHGAP31Q2M1Z3 1444 aa9.5□□□□□ -0.89
CLCN3-202ENST00000360642 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms