RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PIBF1Q8WXW3 757 aa15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 CEP57Q86XR8 500 aa15.31■□□□□ 0.04
SRGAP3-201ENST00000360413 SURF6O75683 361 aaKnown RBP15.3■□□□□ 0.04
SRGAP3-201ENST00000360413 TSNARE1Q96NA8 513 aa15.3■□□□□ 0.04
SRGAP3-201ENST00000360413 NEMFO60524 1076 aa15.3■□□□□ 0.04
SRGAP3-201ENST00000360413 PLEKHO1Q53GL0 409 aaPredicted RBP15.3■□□□□ 0.04
SRGAP3-201ENST00000360413 PAFAH1B1P43034 410 aa15.3■□□□□ 0.04
SRGAP3-201ENST00000360413 ATP2C2O75185 946 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 ATP2B2Q01814 1243 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 SNW1Q13573 536 aaKnown RBP15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 TTC21AQ8NDW8 1320 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 HLTFQ14527 1009 aaKnown RBP eCLIP15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 USP25Q9UHP3 1055 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 RAPGEF2Q9Y4G8 1499 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 TSG101Q99816 390 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 BRD4O60885 1362 aaPredicted RBP15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 ZWINTO95229 277 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 CCDC6Q16204 474 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 MAATS1Q7Z4T9 603 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 ANO10Q9NW15 660 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 MPHOSPH8Q99549 860 aa15.29■□□□□ 0.04
SRGAP3-201ENST00000360413 FBF1Q8TES7 1133 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 SARNPP82979 210 aaKnown RBP15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 NAA15Q9BXJ9 866 aaKnown RBP15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 CCDC196A0A1B0GTZ2 297 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 ADCY5O95622 1261 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 SERPINA10Q9UK55 444 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 CCT4P50991 539 aaKnown RBP15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 PDE3AQ14432 1141 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 CEP112Q8N8E3 955 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 CDCA7LQ96GN5 454 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 UBAC1Q9BSL1 405 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 GNAI2P04899 355 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 PLVAPQ9BX97 442 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 CEP83Q9Y592 693 aa15.28■□□□□ 0.04
SRGAP3-201ENST00000360413 GSDMDP57764 484 aa15.27■□□□□ 0.04
SRGAP3-201ENST00000360413 FKBP15Q5T1M5 1219 aa15.27■□□□□ 0.04
SRGAP3-201ENST00000360413 PPP6R1Q9UPN7 881 aa15.27■□□□□ 0.04
SRGAP3-201ENST00000360413 SLU7O95391 586 aaKnown RBP15.27■□□□□ 0.04
SRGAP3-201ENST00000360413 PYM1Q9BRP8 204 aaKnown RBP15.27■□□□□ 0.04
SRGAP3-201ENST00000360413 CCDC94Q9BW85 323 aaPredicted RBP15.27■□□□□ 0.04
SRGAP3-201ENST00000360413 PDRG1Q9NUG6 133 aa15.27■□□□□ 0.04
SRGAP3-201ENST00000360413 HSF2BPO75031 334 aa15.27■□□□□ 0.03
SRGAP3-201ENST00000360413 DNA2P51530 1060 aa15.27■□□□□ 0.03
SRGAP3-201ENST00000360413 GBP6Q6ZN66 633 aa15.27■□□□□ 0.03
SRGAP3-201ENST00000360413 COMMD10Q9Y6G5 202 aa15.27■□□□□ 0.03
SRGAP3-201ENST00000360413 TMCO5BA8MYB1 307 aa15.27■□□□□ 0.03
SRGAP3-201ENST00000360413 HYPKQ9NX55 129 aa15.26■□□□□ 0.03
SRGAP3-201ENST00000360413 NAP1L3Q99457 506 aaPredicted RBP15.26■□□□□ 0.03
SRGAP3-201ENST00000360413 ARFGAP3Q9NP61 516 aa15.26■□□□□ 0.03
SRGAP3-201ENST00000360413 SCLT1Q96NL6 688 aa15.26■□□□□ 0.03
SRGAP3-201ENST00000360413 KIF4AO95239 1232 aa15.26■□□□□ 0.03
SRGAP3-201ENST00000360413 CLCN1P35523 988 aa15.26■□□□□ 0.03
SRGAP3-201ENST00000360413 SLF2Q8IX21 1173 aa15.26■□□□□ 0.03
SRGAP3-201ENST00000360413 NUP88Q99567 741 aaPredicted RBP15.26■□□□□ 0.03
SRGAP3-201ENST00000360413 AIMP1Q12904 312 aaKnown RBP15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 STXBP4Q6ZWJ1 553 aa15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 C10orf67Q8IYJ2 551 aa15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 ZSCAN31Q96LW9 406 aaPredicted RBP15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 ANKS4BQ8N8V4 417 aa15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 PUS7Q96PZ0 661 aaKnown RBP15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 USO1O60763 962 aaKnown RBP15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 RASSF4Q9H2L5 321 aa15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 HMOX1P09601 288 aa15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 BLOC1S2Q6QNY1 142 aa15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 FAM114A1Q8IWE2 563 aa15.25■□□□□ 0.03
SRGAP3-201ENST00000360413 GOLGA6L9A6NEM1 432 aa15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 CHD1LQ86WJ1 897 aa15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 RSRC1Q96IZ7 334 aaKnown RBP15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 NLRP2Q9NX02 1062 aa15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 ZNF652Q9Y2D9 606 aa15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 MAP4K4O95819 1239 aaPredicted RBP15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 NOB1Q9ULX3 412 aaKnown RBP15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 CCDC172P0C7W6 258 aa15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 CAPN2P17655 700 aa15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 FSD2A1L4K1 749 aa15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 RBM5P52756 815 aaKnown RBP eCLIP15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 NAA25Q14CX7 972 aa15.24■□□□□ 0.03
SRGAP3-201ENST00000360413 ZNF710Q8N1W2 664 aa15.23■□□□□ 0.03
SRGAP3-201ENST00000360413 JAKMIP1Q96N16 626 aaKnown RBP15.23■□□□□ 0.03
SRGAP3-201ENST00000360413 LIG1P18858 919 aa15.23■□□□□ 0.03
SRGAP3-201ENST00000360413 ADAMTS8Q9UP79 889 aa15.23■□□□□ 0.03
SRGAP3-201ENST00000360413 CACNA2D4Q7Z3S7 1137 aa15.23■□□□□ 0.03
SRGAP3-201ENST00000360413 ALS2CR12Q96Q35 445 aa15.23■□□□□ 0.03
SRGAP3-201ENST00000360413 MINK1Q8N4C8 1332 aaPredicted RBP15.23■□□□□ 0.03
SRGAP3-201ENST00000360413 KLHL10Q6JEL2 608 aa15.23■□□□□ 0.03
SRGAP3-201ENST00000360413 FERMT2Q96AC1 680 aa15.23■□□□□ 0.03
SRGAP3-201ENST00000360413 RAB3IL1Q8TBN0 382 aa15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 IKBKGQ9Y6K9 419 aa15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 CTNNA2P26232 953 aa15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 MCM6Q14566 821 aa15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 CTNNBL1Q8WYA6 563 aaPredicted RBP15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 TMEM266Q2M3C6 531 aa15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 NSRP1Q9H0G5 558 aaKnown RBP15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 CASTP20810 708 aaKnown RBP15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 LARP1Q6PKG0 1096 aaKnown RBP15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 TTC12Q9H892 705 aaPredicted RBP15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 DDX46Q7L014 1031 aaKnown RBP15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 TMC6Q7Z403 805 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms