RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 PDRG1Q9NUG6 133 aa14.42□□□□□ -0.1
DNMT1-202ENST00000359526 RAD21O60216 631 aa14.41□□□□□ -0.1
DNMT1-202ENST00000359526 BLOC1S2Q6QNY1 142 aa14.41□□□□□ -0.1
DNMT1-202ENST00000359526 LEKR1Q6ZMV7 388 aa14.41□□□□□ -0.1
DNMT1-202ENST00000359526 PLEKHH1Q9ULM0 1364 aa14.41□□□□□ -0.1
DNMT1-202ENST00000359526 TMOD3Q9NYL9 352 aa14.41□□□□□ -0.1
DNMT1-202ENST00000359526 RDXP35241 583 aaKnown RBP14.41□□□□□ -0.1
DNMT1-202ENST00000359526 TTC39AQ5SRH9 613 aa14.41□□□□□ -0.1
DNMT1-202ENST00000359526 SERPINC1P01008 464 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 BTBD11A6QL63 1104 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 CDKL5O76039 1030 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 TRIM22Q8IYM9 498 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 SPC24Q8NBT2 197 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 NUP62CLQ9H1M0 184 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 SPATA32Q96LK8 384 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 C19orf44Q9H6X5 657 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 ZNHIT6Q9NWK9 470 aaKnown RBP14.4□□□□□ -0.1
DNMT1-202ENST00000359526 NUTM2GQ5VZR2 741 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 MPNDQ8N594 471 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 SMARCC1Q92922 1105 aaPredicted RBP14.4□□□□□ -0.1
DNMT1-202ENST00000359526 PRM3Q9NNZ6 103 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 ADGRF5Q8IZF2 1346 aa14.4□□□□□ -0.1
DNMT1-202ENST00000359526 CT47A1Q5JQC4 288 aaPredicted RBP14.39□□□□□ -0.11
DNMT1-202ENST00000359526 PRAG1Q86YV5 1406 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 CEP57L1Q8IYX8 460 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 TMEM57Q8N5G2 664 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 PRDM10Q9NQV6 1147 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 CTNNA3Q9UI47 895 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 ME1P48163 572 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 PPFIBP1Q86W92 1011 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 ERLIN1O75477 346 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 RARSP54136 660 aaKnown RBP14.39□□□□□ -0.11
DNMT1-202ENST00000359526 FMNL2Q96PY5 1086 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 NACAP1Q9BZK3 213 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 MLH3Q9UHC1 1453 aa14.39□□□□□ -0.11
DNMT1-202ENST00000359526 RAB11FIP3O75154 756 aa14.38□□□□□ -0.11
DNMT1-202ENST00000359526 LUC7LQ9NQ29 371 aaKnown RBP14.38□□□□□ -0.11
DNMT1-202ENST00000359526 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-202ENST00000359526 FBXO31Q5XUX0 539 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-202ENST00000359526 KDM5DQ9BY66 1539 aa14.38□□□□□ -0.11
DNMT1-202ENST00000359526 SMTNL1A8MU46 457 aa14.38□□□□□ -0.11
DNMT1-202ENST00000359526 KIF2AO00139 706 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-202ENST00000359526 NUTM2BA6NNL0 878 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-202ENST00000359526 NUTM2EB1AL46 878 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-202ENST00000359526 STIM1Q13586 685 aa14.38□□□□□ -0.11
DNMT1-202ENST00000359526 RRP12Q5JTH9 1297 aaKnown RBP14.38□□□□□ -0.11
DNMT1-202ENST00000359526 NUTM2AQ8IVF1 878 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-202ENST00000359526 TAF7Q15545 349 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-202ENST00000359526 EXOC5O00471 708 aa14.37□□□□□ -0.11
DNMT1-202ENST00000359526 LARP1Q6PKG0 1096 aaKnown RBP14.37□□□□□ -0.11
DNMT1-202ENST00000359526 AKAP2Q9Y2D5 859 aa14.37□□□□□ -0.11
DNMT1-202ENST00000359526 CHD1O14646 1710 aa14.37□□□□□ -0.11
DNMT1-202ENST00000359526 ASXL1Q8IXJ9 1541 aa14.37□□□□□ -0.11
DNMT1-202ENST00000359526 PIK3C2GO75747 1445 aa14.37□□□□□ -0.11
DNMT1-202ENST00000359526 IFNL2Q8IZJ0 200 aa14.37□□□□□ -0.11
DNMT1-202ENST00000359526 CDK5RAP3Q96JB5 506 aa14.37□□□□□ -0.11
DNMT1-202ENST00000359526 HYPKQ9NX55 129 aa14.37□□□□□ -0.11
DNMT1-202ENST00000359526 SRGAP3O43295 1099 aa14.36□□□□□ -0.11
DNMT1-202ENST00000359526 EIF3JO75822 258 aaKnown RBP14.36□□□□□ -0.11
DNMT1-202ENST00000359526 JAKMIP1Q96N16 626 aaKnown RBP14.36□□□□□ -0.11
DNMT1-202ENST00000359526 PLXNC1O60486 1568 aa14.36□□□□□ -0.11
DNMT1-202ENST00000359526 CEBPZQ03701 1054 aaKnown RBP14.36□□□□□ -0.11
DNMT1-202ENST00000359526 ODF2Q5BJF6 829 aa14.36□□□□□ -0.11
DNMT1-202ENST00000359526 AACSQ86V21 672 aa14.36□□□□□ -0.11
DNMT1-202ENST00000359526 CCDC191Q8NCU4 936 aa14.36□□□□□ -0.11
DNMT1-202ENST00000359526 MAP3K11Q16584 847 aa14.36□□□□□ -0.11
DNMT1-202ENST00000359526 NOL7Q9UMY1 257 aaKnown RBP14.36□□□□□ -0.11
DNMT1-202ENST00000359526 GCC2Q8IWJ2 1684 aa14.35□□□□□ -0.11
DNMT1-202ENST00000359526 ABCC1P33527 1531 aa14.35□□□□□ -0.11
DNMT1-202ENST00000359526 PTPRCP08575 1304 aa14.35□□□□□ -0.11
DNMT1-202ENST00000359526 FYB1O15117 783 aa14.35□□□□□ -0.11
DNMT1-202ENST00000359526 PIP4K2BP78356 416 aa14.35□□□□□ -0.11
DNMT1-202ENST00000359526 WASF1Q92558 559 aa14.35□□□□□ -0.11
DNMT1-202ENST00000359526 CNNM1Q9NRU3 951 aa14.35□□□□□ -0.11
DNMT1-202ENST00000359526 NLRP1Q9C000 1473 aa14.35□□□□□ -0.11
DNMT1-202ENST00000359526 CCDC69A6NI79 296 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 IGHMBP2P38935 993 aaKnown RBP14.34□□□□□ -0.11
DNMT1-202ENST00000359526 CCAR1Q8IX12 1150 aaKnown RBP14.34□□□□□ -0.11
DNMT1-202ENST00000359526 SLF2Q8IX21 1173 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 KIF1BPQ96EK5 621 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 ZNF287Q9HBT7 754 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 MAGI3Q5TCQ9 1506 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 STK3Q13188 491 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 CCDC57Q2TAC2 916 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 SH2B1Q9NRF2 756 aaPredicted RBP14.34□□□□□ -0.11
DNMT1-202ENST00000359526 ARHGEF10O15013 1369 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 KCNA6P17658 529 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 IQCEQ6IPM2 695 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 LRRC59Q96AG4 307 aaKnown RBP14.34□□□□□ -0.11
DNMT1-202ENST00000359526 UPF3BQ9BZI7 483 aaKnown RBP14.34□□□□□ -0.11
DNMT1-202ENST00000359526 TSPYL1Q9H0U9 437 aa14.34□□□□□ -0.11
DNMT1-202ENST00000359526 GLRX3O76003 335 aaKnown RBP14.33□□□□□ -0.11
DNMT1-202ENST00000359526 ERLIN2O94905 339 aa14.33□□□□□ -0.11
DNMT1-202ENST00000359526 ATP2B1P20020 1258 aa14.33□□□□□ -0.11
DNMT1-202ENST00000359526 TTLL5Q6EMB2 1281 aa14.33□□□□□ -0.11
DNMT1-202ENST00000359526 MX1P20591 662 aa14.33□□□□□ -0.12
DNMT1-202ENST00000359526 HSP90AB2PQ58FF8 381 aa14.33□□□□□ -0.12
DNMT1-202ENST00000359526 CCDC183Q5T5S1 534 aa14.33□□□□□ -0.12
DNMT1-202ENST00000359526 CBX1P83916 185 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms