RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 CYP27B1O15528 508 aa13.83□□□□□ -0.2
TRAPPC4-201ENST00000359005 CCDC136Q96JN2 1154 aa13.83□□□□□ -0.2
TRAPPC4-201ENST00000359005 UTRNP46939 3433 aa13.83□□□□□ -0.2
TRAPPC4-201ENST00000359005 SLC15A2Q16348 729 aa13.82□□□□□ -0.2
TRAPPC4-201ENST00000359005 ZNF827Q17R98 1081 aa13.82□□□□□ -0.2
TRAPPC4-201ENST00000359005 ZBTB7AO95365 584 aa13.81□□□□□ -0.2
TRAPPC4-201ENST00000359005 PDE3AQ14432 1141 aa13.81□□□□□ -0.2
TRAPPC4-201ENST00000359005 RAPGEF4Q8WZA2 1011 aa13.81□□□□□ -0.2
TRAPPC4-201ENST00000359005 SYTL4Q96C24 671 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC4-201ENST00000359005 CHMP4AQ9BY43 222 aa13.81□□□□□ -0.2
TRAPPC4-201ENST00000359005 RREB1Q92766 1687 aa13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 TATP17735 454 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 PHACTR3Q96KR7 559 aa13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 CFAP44Q96MT7 982 aa13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 ATF5Q9Y2D1 282 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 NUP188Q5SRE5 1749 aa13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 FANCIQ9NVI1 1328 aa13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 WNK3Q9BYP7 1800 aa13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 PLEKHG2Q9H7P9 1386 aa13.8□□□□□ -0.2
TRAPPC4-201ENST00000359005 PTGER2P43116 358 aa13.79□□□□□ -0.2
TRAPPC4-201ENST00000359005 ALDH1L2Q3SY69 923 aa13.79□□□□□ -0.2
TRAPPC4-201ENST00000359005 CHMP4BQ9H444 224 aaKnown RBP13.79□□□□□ -0.2
TRAPPC4-201ENST00000359005 SPON1Q9HCB6 807 aa13.79□□□□□ -0.2
TRAPPC4-201ENST00000359005 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC4-201ENST00000359005 AMOTQ4VCS5 1084 aa13.78□□□□□ -0.2
TRAPPC4-201ENST00000359005 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
TRAPPC4-201ENST00000359005 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
TRAPPC4-201ENST00000359005 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
TRAPPC4-201ENST00000359005 RARSP54136 660 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-201ENST00000359005 BABAM1Q9NWV8 329 aa13.77□□□□□ -0.21
TRAPPC4-201ENST00000359005 LRP5O75197 1615 aa13.76□□□□□ -0.21
TRAPPC4-201ENST00000359005 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
TRAPPC4-201ENST00000359005 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
TRAPPC4-201ENST00000359005 EXOSC9Q06265 439 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-201ENST00000359005 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC4-201ENST00000359005 SGIP1Q9BQI5 828 aa13.76□□□□□ -0.21
TRAPPC4-201ENST00000359005 LAS1LQ9Y4W2 734 aaKnown RBP13.76□□□□□ -0.21
TRAPPC4-201ENST00000359005 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
TRAPPC4-201ENST00000359005 SOS1Q07889 1333 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC4-201ENST00000359005 DLG5Q8TDM6 1919 aa13.75□□□□□ -0.21
TRAPPC4-201ENST00000359005 ZKSCAN2Q63HK3 967 aa13.75□□□□□ -0.21
TRAPPC4-201ENST00000359005 MPRIPQ6WCQ1 1025 aa13.75□□□□□ -0.21
TRAPPC4-201ENST00000359005 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
TRAPPC4-201ENST00000359005 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
TRAPPC4-201ENST00000359005 NKX1-1Q15270 411 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-201ENST00000359005 PIGBQ92521 554 aa13.74□□□□□ -0.21
TRAPPC4-201ENST00000359005 SMC4Q9NTJ3 1288 aa13.74□□□□□ -0.21
TRAPPC4-201ENST00000359005 NHSQ6T4R5 1651 aa13.73□□□□□ -0.21
TRAPPC4-201ENST00000359005 PCDH11XQ9BZA7 1347 aa13.73□□□□□ -0.21
TRAPPC4-201ENST00000359005 PCDH11YQ9BZA8 1340 aa13.73□□□□□ -0.21
TRAPPC4-201ENST00000359005 SLC27A3Q5K4L6 730 aa13.73□□□□□ -0.21
TRAPPC4-201ENST00000359005 SMIM5Q71RC9 77 aa13.73□□□□□ -0.21
TRAPPC4-201ENST00000359005 AMIGO3Q86WK7 504 aa13.73□□□□□ -0.21
TRAPPC4-201ENST00000359005 FTSJ3Q8IY81 847 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-201ENST00000359005 FRAT1Q92837 279 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC4-201ENST00000359005 TSR2Q969E8 191 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-201ENST00000359005 MAP3K5Q99683 1374 aa13.72□□□□□ -0.21
TRAPPC4-201ENST00000359005 PNPLA7Q6ZV29 1317 aa13.72□□□□□ -0.21
TRAPPC4-201ENST00000359005 PLIN1O60240 522 aa13.72□□□□□ -0.21
TRAPPC4-201ENST00000359005 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC4-201ENST00000359005 MTHFSDQ2M296 383 aaKnown RBP13.72□□□□□ -0.21
TRAPPC4-201ENST00000359005 EXOC6Q8TAG9 804 aa13.72□□□□□ -0.21
TRAPPC4-201ENST00000359005 CCNL1Q9UK58 526 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC4-201ENST00000359005 BCAR3O75815 825 aa13.71□□□□□ -0.21
TRAPPC4-201ENST00000359005 PHKG2P15735 406 aa13.71□□□□□ -0.21
TRAPPC4-201ENST00000359005 C1orf141Q5JVX7 400 aa13.71□□□□□ -0.21
TRAPPC4-201ENST00000359005 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.21
TRAPPC4-201ENST00000359005 CRBNQ96SW2 442 aa13.71□□□□□ -0.21
TRAPPC4-201ENST00000359005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRAPPC4-201ENST00000359005 GOLGB1Q14789 3259 aaKnown RBP13.71□□□□□ -0.22
TRAPPC4-201ENST00000359005 CHL1O00533 1208 aa13.7□□□□□ -0.22
TRAPPC4-201ENST00000359005 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-201ENST00000359005 ARHGAP45Q92619 1136 aa13.7□□□□□ -0.22
TRAPPC4-201ENST00000359005 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
TRAPPC4-201ENST00000359005 MBIPQ9NS73 344 aa13.7□□□□□ -0.22
TRAPPC4-201ENST00000359005 PPP1R1BQ9UD71 204 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-201ENST00000359005 ASAP1Q9ULH1 1129 aa13.7□□□□□ -0.22
TRAPPC4-201ENST00000359005 SPG7Q9UQ90 795 aa13.7□□□□□ -0.22
TRAPPC4-201ENST00000359005 KAT6BQ8WYB5 2073 aa13.7□□□□□ -0.22
TRAPPC4-201ENST00000359005 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
TRAPPC4-201ENST00000359005 RGPD3A6NKT7 1758 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC4-201ENST00000359005 RGPD4Q7Z3J3 1758 aa13.69□□□□□ -0.22
TRAPPC4-201ENST00000359005 AKAP4Q5JQC9 854 aa13.69□□□□□ -0.22
TRAPPC4-201ENST00000359005 COL23A1Q86Y22 540 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC4-201ENST00000359005 DZIP1LQ8IYY4 767 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-201ENST00000359005 TFCP2L1Q9NZI6 479 aa13.69□□□□□ -0.22
TRAPPC4-201ENST00000359005 BTAF1O14981 1849 aa13.69□□□□□ -0.22
TRAPPC4-201ENST00000359005 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
TRAPPC4-201ENST00000359005 TAF7Q15545 349 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-201ENST00000359005 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
TRAPPC4-201ENST00000359005 FHDC1Q9C0D6 1143 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-201ENST00000359005 ATG3Q9NT62 314 aa13.68□□□□□ -0.22
TRAPPC4-201ENST00000359005 TSPYL4Q9UJ04 414 aa13.68□□□□□ -0.22
TRAPPC4-201ENST00000359005 PALLDQ8WX93 1383 aa13.68□□□□□ -0.22
TRAPPC4-201ENST00000359005 ATF7IPQ6VMQ6 1270 aa13.67□□□□□ -0.22
TRAPPC4-201ENST00000359005 CENPQQ7L2Z9 268 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-201ENST00000359005 MCM10Q7L590 875 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms