RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 SIL1Q9H173 461 aa23.85■■□□□ 1.41
EDC4-201ENST00000358933 RAD21O60216 631 aa23.84■■□□□ 1.41
EDC4-201ENST00000358933 MICALCLQ6ZW33 695 aa23.84■■□□□ 1.41
EDC4-201ENST00000358933 TAX1BP1Q86VP1 789 aa23.84■■□□□ 1.41
EDC4-201ENST00000358933 IPO4Q8TEX9 1081 aaKnown RBP23.84■■□□□ 1.41
EDC4-201ENST00000358933 TMC6Q7Z403 805 aa23.84■■□□□ 1.41
EDC4-201ENST00000358933 CTNNA3Q9UI47 895 aa23.84■■□□□ 1.41
EDC4-201ENST00000358933 CCDC186Q7Z3E2 898 aa23.83■■□□□ 1.41
EDC4-201ENST00000358933 CCAR1Q8IX12 1150 aaKnown RBP23.83■■□□□ 1.41
EDC4-201ENST00000358933 RAPGEF4Q8WZA2 1011 aa23.83■■□□□ 1.41
EDC4-201ENST00000358933 CDK5RAP3Q96JB5 506 aa23.83■■□□□ 1.41
EDC4-201ENST00000358933 TMX3Q96JJ7 454 aa23.83■■□□□ 1.41
EDC4-201ENST00000358933 CCDC158Q5M9N0 1113 aa23.83■■□□□ 1.4
EDC4-201ENST00000358933 ZFYVE27Q5T4F4 411 aa23.83■■□□□ 1.4
EDC4-201ENST00000358933 TCEAL9Q9UHQ7 104 aa23.83■■□□□ 1.4
EDC4-201ENST00000358933 KIF20AO95235 890 aa23.82■■□□□ 1.4
EDC4-201ENST00000358933 STK11IPQ8N1F8 1099 aa23.82■■□□□ 1.4
EDC4-201ENST00000358933 GTF2A1P52655 376 aaPredicted RBP23.82■■□□□ 1.4
EDC4-201ENST00000358933 FAM200AQ8TCP9 573 aa23.82■■□□□ 1.4
EDC4-201ENST00000358933 NUCB1Q02818 461 aa23.82■■□□□ 1.4
EDC4-201ENST00000358933 DHX37Q8IY37 1157 aaKnown RBP23.82■■□□□ 1.4
EDC4-201ENST00000358933 CCDC150Q8NCX0 1101 aa23.82■■□□□ 1.4
EDC4-201ENST00000358933 NOL7Q9UMY1 257 aaKnown RBP23.82■■□□□ 1.4
EDC4-201ENST00000358933 EIF5P55010 431 aaKnown RBP23.81■■□□□ 1.4
EDC4-201ENST00000358933 NLRP6P59044 892 aa23.81■■□□□ 1.4
EDC4-201ENST00000358933 IMMTQ16891 758 aaKnown RBP23.81■■□□□ 1.4
EDC4-201ENST00000358933 TERF1P54274 439 aa23.81■■□□□ 1.4
EDC4-201ENST00000358933 PRAM1Q96QH2 718 aa23.81■■□□□ 1.4
EDC4-201ENST00000358933 TFIP11Q9UBB9 837 aaKnown RBP23.81■■□□□ 1.4
EDC4-201ENST00000358933 TTC22Q5TAA0 569 aa23.81■■□□□ 1.4
EDC4-201ENST00000358933 GJB2P29033 226 aa23.8■■□□□ 1.4
EDC4-201ENST00000358933 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.8■■□□□ 1.45e-7■■■■■ 28.6
EDC4-201ENST00000358933 OGFRQ9NZT2 677 aa23.8■■□□□ 1.4
EDC4-201ENST00000358933 CABP1Q9NZU7 370 aa23.8■■□□□ 1.4
EDC4-201ENST00000358933 IVLP07476 585 aa23.8■■□□□ 1.4
EDC4-201ENST00000358933 NEFHP12036 1026 aa23.79■■□□□ 1.4
EDC4-201ENST00000358933 ARFGAP3Q9NP61 516 aa23.79■■□□□ 1.4
EDC4-201ENST00000358933 FYB1O15117 783 aa23.79■■□□□ 1.4
EDC4-201ENST00000358933 SKILP12757 684 aa23.79■■□□□ 1.4
EDC4-201ENST00000358933 MNAT1P51948 309 aa23.79■■□□□ 1.4
EDC4-201ENST00000358933 THUMPD2Q9BTF0 503 aaKnown RBP23.79■■□□□ 1.4
EDC4-201ENST00000358933 FSIP1Q8NA03 581 aa23.79■■□□□ 1.4
EDC4-201ENST00000358933 CCDC43Q96MW1 224 aaKnown RBP23.79■■□□□ 1.4
EDC4-201ENST00000358933 CCDC69A6NI79 296 aa23.78■■□□□ 1.4
EDC4-201ENST00000358933 SLU7O95391 586 aaKnown RBP23.78■■□□□ 1.4
EDC4-201ENST00000358933 ENOX2Q16206 610 aaKnown RBP23.78■■□□□ 1.4
EDC4-201ENST00000358933 ZNF397Q8NF99 534 aaPredicted RBP23.78■■□□□ 1.4
EDC4-201ENST00000358933 DNAAF4Q8WXU2 420 aa23.78■■□□□ 1.4
EDC4-201ENST00000358933 RBM33Q96EV2 1170 aaKnown RBP23.78■■□□□ 1.4
EDC4-201ENST00000358933 IGSF3O75054 1194 aa23.78■■□□□ 1.4
EDC4-201ENST00000358933 TAF4BQ92750 862 aa23.78■■□□□ 1.4
EDC4-201ENST00000358933 ZSCAN22P10073 491 aaPredicted RBP23.78■■□□□ 1.4
EDC4-201ENST00000358933 IBSPP21815 317 aaPredicted RBP23.78■■□□□ 1.4
EDC4-201ENST00000358933 TANGO6Q9C0B7 1094 aa23.78■■□□□ 1.4
EDC4-201ENST00000358933 TTC39AQ5SRH9 613 aa23.77■■□□□ 1.4
EDC4-201ENST00000358933 RPRD2Q5VT52 1461 aaKnown RBP23.77■■□□□ 1.4
EDC4-201ENST00000358933 PRDM2Q13029 1718 aa23.77■■□□□ 1.4
EDC4-201ENST00000358933 RNF187Q5TA31 235 aaPredicted RBP23.77■■□□□ 1.4
EDC4-201ENST00000358933 GNG11P61952 73 aa23.77■■□□□ 1.4
EDC4-201ENST00000358933 PSME1Q06323 249 aa23.77■■□□□ 1.4
EDC4-201ENST00000358933 DYDC1Q8WWB3 177 aa23.77■■□□□ 1.4
EDC4-201ENST00000358933 USP48Q86UV5 1035 aa23.76■■□□□ 1.39
EDC4-201ENST00000358933 DDX54Q8TDD1 881 aaKnown RBP23.76■■□□□ 1.39
EDC4-201ENST00000358933 SLC3A2P08195 630 aaKnown RBP23.76■■□□□ 1.39
EDC4-201ENST00000358933 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.76■■□□□ 1.39
EDC4-201ENST00000358933 WASF1Q92558 559 aa23.76■■□□□ 1.39
EDC4-201ENST00000358933 RAI14Q9P0K7 980 aa23.75■■□□□ 1.39
EDC4-201ENST00000358933 SUPT6HQ7KZ85 1726 aaKnown RBP23.75■■□□□ 1.39
EDC4-201ENST00000358933 PLEKHO1Q53GL0 409 aaPredicted RBP23.75■■□□□ 1.39
EDC4-201ENST00000358933 TUBB4AP04350 444 aa23.75■■□□□ 1.39
EDC4-201ENST00000358933 SPA17Q15506 151 aa23.75■■□□□ 1.39
EDC4-201ENST00000358933 CTR9Q6PD62 1173 aa23.75■■□□□ 1.39
EDC4-201ENST00000358933 SEC24BO95487 1268 aa23.74■■□□□ 1.39
EDC4-201ENST00000358933 LARP6Q9BRS8 491 aaKnown RBP23.74■■□□□ 1.39
EDC4-201ENST00000358933 SYCP1Q15431 976 aa23.74■■□□□ 1.39
EDC4-201ENST00000358933 SEPT7Q16181 437 aaKnown RBP23.74■■□□□ 1.39
EDC4-201ENST00000358933 CDK19Q9BWU1 502 aa23.74■■□□□ 1.39
EDC4-201ENST00000358933 CEP131Q9UPN4 1083 aa23.74■■□□□ 1.39
EDC4-201ENST00000358933 IRX3P78415 501 aaPredicted RBP23.73■■□□□ 1.39
EDC4-201ENST00000358933 AFAP1Q8N556 730 aa23.73■■□□□ 1.39
EDC4-201ENST00000358933 C8orf76Q96K31 380 aa23.73■■□□□ 1.39
EDC4-201ENST00000358933 ATAD2Q6PL18 1390 aa23.73■■□□□ 1.39
EDC4-201ENST00000358933 NACAP1Q9BZK3 213 aa23.73■■□□□ 1.39
EDC4-201ENST00000358933 U3KPZ7 1027 aaPredicted RBP23.73■■□□□ 1.39
EDC4-201ENST00000358933 RBM42Q9BTD8 480 aaKnown RBP23.73■■□□□ 1.39
EDC4-201ENST00000358933 MTMR7Q9Y216 660 aa23.73■■□□□ 1.39
EDC4-201ENST00000358933 SRRTQ9BXP5 876 aaKnown RBP23.72■■□□□ 1.39
EDC4-201ENST00000358933 PAFAH1B1P43034 410 aa23.72■■□□□ 1.39
EDC4-201ENST00000358933 TMX1Q9H3N1 280 aa23.72■■□□□ 1.39
EDC4-201ENST00000358933 TROQ12816 1431 aaPredicted RBP23.72■■□□□ 1.39
EDC4-201ENST00000358933 NCAPD3P42695 1498 aa23.72■■□□□ 1.39
EDC4-201ENST00000358933 ANO6Q4KMQ2 910 aa23.72■■□□□ 1.39
EDC4-201ENST00000358933 KLHL10Q6JEL2 608 aa23.72■■□□□ 1.39
EDC4-201ENST00000358933 CCDC12Q8WUD4 166 aaPredicted RBP23.72■■□□□ 1.39
EDC4-201ENST00000358933 KRT18P05783 430 aaKnown RBP23.71■■□□□ 1.39
EDC4-201ENST00000358933 ZNF692Q9BU19 519 aaPredicted RBP23.71■■□□□ 1.39
EDC4-201ENST00000358933 DNAI1Q9UI46 699 aa23.71■■□□□ 1.39
EDC4-201ENST00000358933 CNPY2Q9Y2B0 182 aa23.71■■□□□ 1.39
EDC4-201ENST00000358933 HMGB1P09429 215 aaKnown RBP23.71■■□□□ 1.39
EDC4-201ENST00000358933 ZSCAN25Q6NSZ9 544 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms