RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 G2E3Q7L622 706 aa15.22■□□□□ 0.03
SYN3-202ENST00000358763 IFNL2Q8IZJ0 200 aa15.22■□□□□ 0.03
SYN3-202ENST00000358763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.032e-8■■■■■ 33.7
SYN3-202ENST00000358763 COL16A1Q07092 1604 aaPredicted RBP15.22■□□□□ 0.03
SYN3-202ENST00000358763 EIF4A1P60842 406 aaKnown RBP15.21■□□□□ 0.03
SYN3-202ENST00000358763 AAMPQ13685 434 aa15.21■□□□□ 0.03
SYN3-202ENST00000358763 COL22A1Q8NFW1 1626 aaPredicted RBP15.21■□□□□ 0.03
SYN3-202ENST00000358763 CARD10Q9BWT7 1032 aa15.21■□□□□ 0.02
SYN3-202ENST00000358763 STK31Q9BXU1 1019 aa15.21■□□□□ 0.02
SYN3-202ENST00000358763 ADAMTS7Q9UKP4 1686 aa15.21■□□□□ 0.02
SYN3-202ENST00000358763 RGS12O14924 1447 aa15.2■□□□□ 0.02
SYN3-202ENST00000358763 UBAP1LF5GYI3 381 aa15.2■□□□□ 0.02
SYN3-202ENST00000358763 PARP4Q9UKK3 1724 aaKnown RBP15.2■□□□□ 0.02
SYN3-202ENST00000358763 SCN11AQ9UI33 1791 aa15.2■□□□□ 0.02
SYN3-202ENST00000358763 SIPA1L3O60292 1781 aaPredicted RBP15.2■□□□□ 0.02
SYN3-202ENST00000358763 ADAMTS2O95450 1211 aa15.19■□□□□ 0.02
SYN3-202ENST00000358763 EIF2S2P20042 333 aaKnown RBP15.19■□□□□ 0.02
SYN3-202ENST00000358763 HDGFL1Q5TGJ6 251 aa15.19■□□□□ 0.02
SYN3-202ENST00000358763 CCDC30Q5VVM6 783 aa15.19■□□□□ 0.02
SYN3-202ENST00000358763 ZBTB40Q9NUA8 1239 aa15.19■□□□□ 0.02
SYN3-202ENST00000358763 IL2RBP14784 551 aa15.19■□□□□ 0.02
SYN3-202ENST00000358763 PTPRCP08575 1304 aa15.18■□□□□ 0.02
SYN3-202ENST00000358763 COL14A1Q05707 1796 aaKnown RBP15.18■□□□□ 0.02
SYN3-202ENST00000358763 SLC39A6Q13433 755 aa15.18■□□□□ 0.02
SYN3-202ENST00000358763 NFATC2IPQ8NCF5 419 aa15.18■□□□□ 0.02
SYN3-202ENST00000358763 ZCRB1Q8TBF4 217 aaKnown RBP15.18■□□□□ 0.02
SYN3-202ENST00000358763 C1orf115Q9H7X2 142 aa15.18■□□□□ 0.02
SYN3-202ENST00000358763 SLC52A2Q9HAB3 445 aa15.18■□□□□ 0.02
SYN3-202ENST00000358763 NUTM2BA6NNL0 878 aaPredicted RBP15.17■□□□□ 0.02
SYN3-202ENST00000358763 NUTM2EB1AL46 878 aaPredicted RBP15.17■□□□□ 0.02
SYN3-202ENST00000358763 F6X3S4 739 aa15.17■□□□□ 0.02
SYN3-202ENST00000358763 NUTM2AQ8IVF1 878 aaPredicted RBP15.17■□□□□ 0.02
SYN3-202ENST00000358763 ZBTB7BO15156 539 aaPredicted RBP15.17■□□□□ 0.02
SYN3-202ENST00000358763 DCAF5Q96JK2 942 aa15.17■□□□□ 0.02
SYN3-202ENST00000358763 PLEKHG2Q9H7P9 1386 aa15.16■□□□□ 0.02
SYN3-202ENST00000358763 SOS1Q07889 1333 aaPredicted RBP15.16■□□□□ 0.02
SYN3-202ENST00000358763 PCDH11XQ9BZA7 1347 aa15.16■□□□□ 0.02
SYN3-202ENST00000358763 PCDH11YQ9BZA8 1340 aa15.16■□□□□ 0.02
SYN3-202ENST00000358763 PRAMEF22A3QJZ6 481 aa15.16■□□□□ 0.02
SYN3-202ENST00000358763 FLIIQ13045 1269 aa15.16■□□□□ 0.02
SYN3-202ENST00000358763 SLC4A10Q6U841 1118 aa15.16■□□□□ 0.02
SYN3-202ENST00000358763 DDX54Q8TDD1 881 aaKnown RBP15.16■□□□□ 0.02
SYN3-202ENST00000358763 RGS3P49796 1198 aa15.15■□□□□ 0.02
SYN3-202ENST00000358763 RWDD1Q9H446 243 aaPredicted RBP15.15■□□□□ 0.02
SYN3-202ENST00000358763 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
SYN3-202ENST00000358763 ANXA1P04083 346 aa15.15■□□□□ 0.02
SYN3-202ENST00000358763 CHPF2Q9P2E5 772 aa15.15■□□□□ 0.02
SYN3-202ENST00000358763 HSP90AB1P08238 724 aaKnown RBP15.14■□□□□ 0.01
SYN3-202ENST00000358763 INTS3Q68E01 1043 aaKnown RBP15.14■□□□□ 0.01
SYN3-202ENST00000358763 PHAXQ9H814 394 aaKnown RBP15.14■□□□□ 0.01
SYN3-202ENST00000358763 ZNF790Q6PG37 636 aa15.14■□□□□ 0.01
SYN3-202ENST00000358763 RBM19Q9Y4C8 960 aaKnown RBP15.14■□□□□ 0.01
SYN3-202ENST00000358763 SHANK3Q9BYB0 1731 aa15.14■□□□□ 0.01
SYN3-202ENST00000358763 MRC1P22897 1456 aa15.13■□□□□ 0.01
SYN3-202ENST00000358763 GIGYF1O75420 1035 aaPredicted RBP15.13■□□□□ 0.01
SYN3-202ENST00000358763 HOXB7P09629 217 aa15.13■□□□□ 0.01
SYN3-202ENST00000358763 CABP4P57796 275 aa15.13■□□□□ 0.01
SYN3-202ENST00000358763 PLCH1Q4KWH8 1693 aa15.12■□□□□ 0.01
SYN3-202ENST00000358763 HEG1Q9ULI3 1381 aa15.12■□□□□ 0.01
SYN3-202ENST00000358763 CACNA1FO60840 1977 aa15.11■□□□□ 0.01
SYN3-202ENST00000358763 CHMP4BQ9H444 224 aaKnown RBP15.11■□□□□ 0.01
SYN3-202ENST00000358763 HDAC1Q13547 482 aaPredicted RBP15.11■□□□□ 0.01
SYN3-202ENST00000358763 ZNF496Q96IT1 587 aaPredicted RBP15.11■□□□□ 0.01
SYN3-202ENST00000358763 MEIS3Q99687 375 aa15.1■□□□□ 0.01
SYN3-202ENST00000358763 TTC5Q8N0Z6 440 aa15.1■□□□□ 0.01
SYN3-202ENST00000358763 C5P01031 1676 aa15.1■□□□□ 0.01
SYN3-202ENST00000358763 PROSER3Q2NL68 480 aa15.1■□□□□ 0.01
SYN3-202ENST00000358763 PDZRN3Q9UPQ7 1066 aa15.1■□□□□ 0.01
SYN3-202ENST00000358763 DISP2A7MBM2 1401 aa15.08■□□□□ 0
SYN3-202ENST00000358763 CCT4P50991 539 aaKnown RBP15.08■□□□□ 0
SYN3-202ENST00000358763 DBF4Q9UBU7 674 aaPredicted RBP15.08■□□□□ 0
SYN3-202ENST00000358763 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0
SYN3-202ENST00000358763 SIRT2Q8IXJ6 389 aa15.08■□□□□ 0
SYN3-202ENST00000358763 NRAPQ86VF7 1730 aa15.08■□□□□ 0
SYN3-202ENST00000358763 CHMP4AQ9BY43 222 aa15.07■□□□□ 0
SYN3-202ENST00000358763 TOGARAM1Q9Y4F4 1720 aa15.07■□□□□ 0
SYN3-202ENST00000358763 CERKQ8TCT0 537 aa15.06■□□□□ 0
SYN3-202ENST00000358763 ERVV-2B6SEH9 535 aa15.06■□□□□ 0
SYN3-202ENST00000358763 FMNL2Q96PY5 1086 aa15.06■□□□□ 0
SYN3-202ENST00000358763 CCDC9Q9Y3X0 531 aaKnown RBP15.06■□□□□ 0
SYN3-202ENST00000358763 PI4KAP2A4QPH2 592 aa15.05■□□□□ -0
SYN3-202ENST00000358763 PDE4AP27815 886 aa15.05■□□□□ -0
SYN3-202ENST00000358763 PIP4K2AP48426 406 aaPredicted RBP15.05■□□□□ -0
SYN3-202ENST00000358763 SMC5Q8IY18 1101 aa15.05■□□□□ -0
SYN3-202ENST00000358763 PI4KAP1Q8N8J0 262 aa15.05■□□□□ -0
SYN3-202ENST00000358763 ATP10DQ9P241 1426 aa15.05■□□□□ -0
SYN3-202ENST00000358763 USP16Q9Y5T5 823 aa15.05■□□□□ -0
SYN3-202ENST00000358763 SNRPA1P09661 255 aaKnown RBP15.04■□□□□ -0
SYN3-202ENST00000358763 MYL6BP14649 208 aa15.04■□□□□ -0
SYN3-202ENST00000358763 SPATA31A1Q5TZJ5 1347 aa15.04■□□□□ -0
SYN3-202ENST00000358763 AIMP1Q12904 312 aaKnown RBP15.04■□□□□ -0
SYN3-202ENST00000358763 WNK3Q9BYP7 1800 aa15.04■□□□□ -0
SYN3-202ENST00000358763 ADCY9O60503 1353 aa15.04■□□□□ -0
SYN3-202ENST00000358763 GLI3P10071 1580 aa15.04■□□□□ -0
SYN3-202ENST00000358763 PDIA6Q15084 440 aa15.03■□□□□ -0
SYN3-202ENST00000358763 C8orf37Q96NL8 207 aa15.03■□□□□ -0
SYN3-202ENST00000358763 JCADQ9P266 1359 aa15.03■□□□□ -0
SYN3-202ENST00000358763 PXDNLA1KZ92 1463 aa15.03■□□□□ -0
SYN3-202ENST00000358763 PTCD1O75127 700 aaKnown RBP15.03■□□□□ -0
SYN3-202ENST00000358763 DDX21Q9NR30 783 aaKnown RBP eCLIP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms