RNA–Protein interactions for RNA: ENST00000358184.6

CTSE-201, Transcript of cathepsin E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSE, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-201ENST00000358184 RSPH14Q9UHP6 348 aa12.88□□□□□ -0.35
CTSE-201ENST00000358184 ZKSCAN5Q9Y2L8 839 aa12.88□□□□□ -0.35
CTSE-201ENST00000358184 ANKARQ7Z5J8 1434 aa12.87□□□□□ -0.35
CTSE-201ENST00000358184 CDC42BPGQ6DT37 1551 aa12.87□□□□□ -0.35
CTSE-201ENST00000358184 NASPP49321 788 aaPredicted RBP12.87□□□□□ -0.35
CTSE-201ENST00000358184 HDGFL2Q7Z4V5 671 aaPredicted RBP12.87□□□□□ -0.35
CTSE-201ENST00000358184 PROSER2Q86WR7 435 aaPredicted RBP12.87□□□□□ -0.35
CTSE-201ENST00000358184 PPIP5K1Q6PFW1 1433 aa12.87□□□□□ -0.35
CTSE-201ENST00000358184 UPF2Q9HAU5 1272 aaKnown RBP12.86□□□□□ -0.35
CTSE-201ENST00000358184 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
CTSE-201ENST00000358184 CD163L1Q9NR16 1453 aa12.86□□□□□ -0.35
CTSE-201ENST00000358184 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
CTSE-201ENST00000358184 PLEKHG3A1L390 1219 aa12.86□□□□□ -0.35
CTSE-201ENST00000358184 RBM25P49756 843 aaKnown RBP12.86□□□□□ -0.35
CTSE-201ENST00000358184 NSD3Q9BZ95 1437 aa12.86□□□□□ -0.35
CTSE-201ENST00000358184 BORCS6Q96GS4 357 aa12.85□□□□□ -0.35
CTSE-201ENST00000358184 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
CTSE-201ENST00000358184 CGNL1Q0VF96 1302 aa12.85□□□□□ -0.35
CTSE-201ENST00000358184 RAD50Q92878 1312 aa12.85□□□□□ -0.35
CTSE-201ENST00000358184 ZNF853P0CG23 659 aa12.85□□□□□ -0.35
CTSE-201ENST00000358184 CPSF1Q10570 1443 aaKnown RBP12.84□□□□□ -0.35
CTSE-201ENST00000358184 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
CTSE-201ENST00000358184 TERF2Q15554 542 aa12.84□□□□□ -0.35
CTSE-201ENST00000358184 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
CTSE-201ENST00000358184 CWC22Q9HCG8 908 aaKnown RBP12.84□□□□□ -0.35
CTSE-201ENST00000358184 NSD2O96028 1365 aa12.84□□□□□ -0.35
CTSE-201ENST00000358184 U2AF2P26368 475 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTSE-201ENST00000358184 TDO2P48775 406 aa12.84□□□□□ -0.35
CTSE-201ENST00000358184 PDE3AQ14432 1141 aa12.84□□□□□ -0.35
CTSE-201ENST00000358184 CASC1Q6TDU7 716 aa12.84□□□□□ -0.35
CTSE-201ENST00000358184 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
CTSE-201ENST00000358184 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.36
CTSE-201ENST00000358184 CCDC146Q8IYE0 955 aa12.83□□□□□ -0.36
CTSE-201ENST00000358184 MNS1Q8NEH6 495 aa12.83□□□□□ -0.36
CTSE-201ENST00000358184 MED4Q9NPJ6 270 aa12.83□□□□□ -0.36
CTSE-201ENST00000358184 FMN2Q9NZ56 1722 aa12.83□□□□□ -0.36
CTSE-201ENST00000358184 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
CTSE-201ENST00000358184 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
CTSE-201ENST00000358184 APAF1O14727 1248 aa12.82□□□□□ -0.36
CTSE-201ENST00000358184 ARID4AP29374 1257 aaPredicted RBP12.82□□□□□ -0.36
CTSE-201ENST00000358184 CREBRFQ8IUR6 639 aa12.82□□□□□ -0.36
CTSE-201ENST00000358184 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
CTSE-201ENST00000358184 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
CTSE-201ENST00000358184 USP19O94966 1318 aa12.82□□□□□ -0.36
CTSE-201ENST00000358184 CCDC189A1A4V9 331 aa12.82□□□□□ -0.36
CTSE-201ENST00000358184 RBM33Q96EV2 1170 aaKnown RBP12.82□□□□□ -0.36
CTSE-201ENST00000358184 DCCP43146 1447 aa12.82□□□□□ -0.36
CTSE-201ENST00000358184 BCAR3O75815 825 aa12.81□□□□□ -0.36
CTSE-201ENST00000358184 TSC1Q92574 1164 aa12.81□□□□□ -0.36
CTSE-201ENST00000358184 RASSF4Q9H2L5 321 aa12.81□□□□□ -0.36
CTSE-201ENST00000358184 ITSN1Q15811 1721 aa12.81□□□□□ -0.36
CTSE-201ENST00000358184 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
CTSE-201ENST00000358184 HSP90AB1P08238 724 aaKnown RBP12.81□□□□□ -0.36
CTSE-201ENST00000358184 ANKRD7Q92527 254 aa12.81□□□□□ -0.36
CTSE-201ENST00000358184 JARID2Q92833 1246 aaPredicted RBP12.81□□□□□ -0.36
CTSE-201ENST00000358184 PDLIM2Q96JY6 352 aa12.81□□□□□ -0.36
CTSE-201ENST00000358184 BCL2L12Q9HB09 334 aa12.81□□□□□ -0.36
CTSE-201ENST00000358184 IGHDP01880 384 aa12.8□□□□□ -0.36
CTSE-201ENST00000358184 CALR3Q96L12 384 aaKnown RBP12.8□□□□□ -0.36
CTSE-201ENST00000358184 POLR3AO14802 1390 aaPredicted RBP12.8□□□□□ -0.36
CTSE-201ENST00000358184 ZNF335Q9H4Z2 1342 aaPredicted RBP12.8□□□□□ -0.36
CTSE-201ENST00000358184 NUTM2FA1L443 756 aa12.8□□□□□ -0.36
CTSE-201ENST00000358184 ZNF513Q8N8E2 541 aaPredicted RBP12.8□□□□□ -0.36
CTSE-201ENST00000358184 ITFG2Q969R8 447 aa12.8□□□□□ -0.36
CTSE-201ENST00000358184 ACEP12821 1306 aa12.79□□□□□ -0.36
CTSE-201ENST00000358184 RAD51AP2Q09MP3 1159 aa12.79□□□□□ -0.36
CTSE-201ENST00000358184 DNAJC21Q5F1R6 531 aaKnown RBP12.79□□□□□ -0.36
CTSE-201ENST00000358184 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
CTSE-201ENST00000358184 LRRC7Q96NW7 1537 aa12.79□□□□□ -0.36
CTSE-201ENST00000358184 CHMP5Q9NZZ3 219 aa12.78□□□□□ -0.36
CTSE-201ENST00000358184 IBTKQ9P2D0 1353 aaPredicted RBP12.78□□□□□ -0.36
CTSE-201ENST00000358184 ATF3P18847 181 aa12.78□□□□□ -0.36
CTSE-201ENST00000358184 SKOR2Q2VWA4 1001 aaPredicted RBP12.78□□□□□ -0.36
CTSE-201ENST00000358184 SUFUQ9UMX1 484 aa12.78□□□□□ -0.36
CTSE-201ENST00000358184 SHPRHQ149N8 1683 aa12.78□□□□□ -0.36
CTSE-201ENST00000358184 MSH6P52701 1360 aa12.77□□□□□ -0.36
CTSE-201ENST00000358184 FYB1O15117 783 aa12.77□□□□□ -0.36
CTSE-201ENST00000358184 CADPS2Q86UW7 1296 aa12.77□□□□□ -0.36
CTSE-201ENST00000358184 MRVI1Q9Y6F6 885 aa12.77□□□□□ -0.36
CTSE-201ENST00000358184 AKAP12Q02952 1782 aa12.77□□□□□ -0.36
CTSE-201ENST00000358184 MON2Q7Z3U7 1717 aa12.77□□□□□ -0.37
CTSE-201ENST00000358184 PPP1R12AO14974 1030 aaPredicted RBP12.77□□□□□ -0.37
CTSE-201ENST00000358184 MORC1Q86VD1 984 aa12.77□□□□□ -0.37
CTSE-201ENST00000358184 NGDNQ8NEJ9 315 aaKnown RBP12.77□□□□□ -0.37
CTSE-201ENST00000358184 TRERF1Q96PN7 1200 aa12.77□□□□□ -0.37
CTSE-201ENST00000358184 USP6P35125 1406 aa12.77□□□□□ -0.37
CTSE-201ENST00000358184 CCDC96Q2M329 555 aa12.76□□□□□ -0.37
CTSE-201ENST00000358184 TMX1Q9H3N1 280 aa12.76□□□□□ -0.37
CTSE-201ENST00000358184 CXorf56Q9H5V9 222 aa12.76□□□□□ -0.37
CTSE-201ENST00000358184 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
CTSE-201ENST00000358184 SSH2Q76I76 1423 aa12.76□□□□□ -0.37
CTSE-201ENST00000358184 CALRP27797 417 aaKnown RBP12.76□□□□□ -0.37
CTSE-201ENST00000358184 PMFBP1Q8TBY8 1022 aa12.76□□□□□ -0.37
CTSE-201ENST00000358184 LRCH2Q5VUJ6 765 aa12.75□□□□□ -0.37
CTSE-201ENST00000358184 C1orf167Q5SNV9 1468 aa12.75□□□□□ -0.37
CTSE-201ENST00000358184 IQSEC2Q5JU85 1478 aa12.74□□□□□ -0.37
CTSE-201ENST00000358184 KLHL33A6NCF5 533 aa12.74□□□□□ -0.37
CTSE-201ENST00000358184 ESCO1Q5FWF5 840 aa12.74□□□□□ -0.37
CTSE-201ENST00000358184 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTSE-201ENST00000358184 CCDC39Q9UFE4 941 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms