RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 SLC4A2P04920 1241 aa28.76■■■□□ 2.19
NPAS3-203ENST00000357798 SULT6B1Q6IMI4 303 aa28.76■■■□□ 2.19
NPAS3-203ENST00000357798 CRB1P82279 1406 aa28.76■■■□□ 2.19
NPAS3-203ENST00000357798 EIF4A2Q14240 407 aaKnown RBP28.75■■■□□ 2.19
NPAS3-203ENST00000357798 PALD1Q9ULE6 856 aa28.75■■■□□ 2.19
NPAS3-203ENST00000357798 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.75■■■□□ 2.19
NPAS3-203ENST00000357798 MCM10Q7L590 875 aa28.75■■■□□ 2.19
NPAS3-203ENST00000357798 RGPD1P0DJD0 1748 aa28.74■■■□□ 2.19
NPAS3-203ENST00000357798 GNAI2P04899 355 aa28.73■■■□□ 2.19
NPAS3-203ENST00000357798 CHMLP26374 656 aa28.73■■■□□ 2.19
NPAS3-203ENST00000357798 NUDT16Q96DE0 195 aaKnown RBP28.73■■■□□ 2.19
NPAS3-203ENST00000357798 A2ML1A8K2U0 1454 aa28.73■■■□□ 2.19
NPAS3-203ENST00000357798 WDR33Q9C0J8 1336 aaKnown RBP28.73■■■□□ 2.19
NPAS3-203ENST00000357798 EPB41L2O43491 1005 aaKnown RBP28.73■■■□□ 2.19
NPAS3-203ENST00000357798 MX1P20591 662 aa28.72■■■□□ 2.19
NPAS3-203ENST00000357798 LRRCC1Q9C099 1032 aa28.72■■■□□ 2.19
NPAS3-203ENST00000357798 TMEM87AQ8NBN3 555 aa28.71■■■□□ 2.19
NPAS3-203ENST00000357798 CCDC61Q9Y6R9 512 aa28.71■■■□□ 2.19
NPAS3-203ENST00000357798 ARHGEF10O15013 1369 aa28.71■■■□□ 2.19
NPAS3-203ENST00000357798 ANO2Q9NQ90 1003 aa28.71■■■□□ 2.19
NPAS3-203ENST00000357798 EXOC6BQ9Y2D4 811 aa28.7■■■□□ 2.19
NPAS3-203ENST00000357798 STAP2Q9UGK3 403 aa28.7■■■□□ 2.18
NPAS3-203ENST00000357798 MYRIPQ8NFW9 859 aa28.69■■■□□ 2.18
NPAS3-203ENST00000357798 SLC4A10Q6U841 1118 aa28.69■■■□□ 2.18
NPAS3-203ENST00000357798 SRCIN1Q9C0H9 1055 aa28.69■■■□□ 2.18
NPAS3-203ENST00000357798 NRXN3Q9Y4C0 1643 aa28.69■■■□□ 2.18
NPAS3-203ENST00000357798 USP48Q86UV5 1035 aa28.68■■■□□ 2.18
NPAS3-203ENST00000357798 GADD45BO75293 160 aaPredicted RBP28.68■■■□□ 2.18
NPAS3-203ENST00000357798 SMAP1Q8IYB5 467 aaPredicted RBP28.68■■■□□ 2.18
NPAS3-203ENST00000357798 TSHZ3Q63HK5 1081 aa28.67■■■□□ 2.18
NPAS3-203ENST00000357798 G2E3Q7L622 706 aa28.67■■■□□ 2.18
NPAS3-203ENST00000357798 AOX1Q06278 1338 aa28.67■■■□□ 2.18
NPAS3-203ENST00000357798 PIBF1Q8WXW3 757 aa28.67■■■□□ 2.18
NPAS3-203ENST00000357798 PRIMPOLQ96LW4 560 aa28.67■■■□□ 2.18
NPAS3-203ENST00000357798 SPATA31D1Q6ZQQ2 1576 aa28.67■■■□□ 2.18
NPAS3-203ENST00000357798 PLEKHG5O94827 1062 aa28.67■■■□□ 2.18
NPAS3-203ENST00000357798 F6X3S4 739 aa28.66■■■□□ 2.18
NPAS3-203ENST00000357798 CCDC183Q5T5S1 534 aa28.66■■■□□ 2.18
NPAS3-203ENST00000357798 NOL8Q76FK4 1167 aaKnown RBP28.66■■■□□ 2.18
NPAS3-203ENST00000357798 PRDM4Q9UKN5 801 aa28.66■■■□□ 2.18
NPAS3-203ENST00000357798 LETM1O95202 739 aaPredicted RBP28.65■■■□□ 2.18
NPAS3-203ENST00000357798 TCHHQ07283 1943 aa28.65■■■□□ 2.18
NPAS3-203ENST00000357798 TRIM6-TRIM34B2RNG4 842 aa28.65■■■□□ 2.18
NPAS3-203ENST00000357798 GNAI3P08754 354 aa28.65■■■□□ 2.18
NPAS3-203ENST00000357798 RILPL2Q969X0 211 aa28.65■■■□□ 2.18
NPAS3-203ENST00000357798 RPAP1Q9BWH6 1393 aaPredicted RBP28.65■■■□□ 2.18
NPAS3-203ENST00000357798 N4BP2Q86UW6 1770 aaPredicted RBP28.65■■■□□ 2.18
NPAS3-203ENST00000357798 KLHL34Q8N239 644 aa28.64■■■□□ 2.18
NPAS3-203ENST00000357798 XRN1Q8IZH2 1706 aaKnown RBP28.64■■■□□ 2.18
NPAS3-203ENST00000357798 NALCNQ8IZF0 1738 aa28.64■■■□□ 2.17
NPAS3-203ENST00000357798 PEAK1Q9H792 1746 aa28.64■■■□□ 2.17
NPAS3-203ENST00000357798 HMGN5P82970 282 aaKnown RBP28.63■■■□□ 2.17
NPAS3-203ENST00000357798 ATP8B2P98198 1209 aa28.63■■■□□ 2.17
NPAS3-203ENST00000357798 GDPD2Q9HCC8 539 aa28.63■■■□□ 2.17
NPAS3-203ENST00000357798 SIRT1Q96EB6 747 aa28.62■■■□□ 2.17
NPAS3-203ENST00000357798 UPF3BQ9BZI7 483 aaKnown RBP28.62■■■□□ 2.17
NPAS3-203ENST00000357798 NCKAP5LQ9HCH0 1330 aa28.62■■■□□ 2.17
NPAS3-203ENST00000357798 OVOS2A0A0J9YW53 1432 aa28.62■■■□□ 2.17
NPAS3-203ENST00000357798 OVOS2Q6IE36 1432 aa28.62■■■□□ 2.17
NPAS3-203ENST00000357798 HSPA4P34932 840 aa28.62■■■□□ 2.17
NPAS3-203ENST00000357798 TECPR2O15040 1411 aa28.61■■■□□ 2.17
NPAS3-203ENST00000357798 FAM208AQ9UK61 1670 aaKnown RBP28.61■■■□□ 2.17
NPAS3-203ENST00000357798 GTF2F1P35269 517 aaKnown RBP eCLIP28.61■■■□□ 2.17
NPAS3-203ENST00000357798 DNTTIP2Q5QJE6 756 aaKnown RBP28.61■■■□□ 2.17
NPAS3-203ENST00000357798 TSPYL4Q9UJ04 414 aa28.61■■■□□ 2.17
NPAS3-203ENST00000357798 CCDC94Q9BW85 323 aaPredicted RBP28.6■■■□□ 2.17
NPAS3-203ENST00000357798 NOLC1Q14978 699 aaKnown RBP eCLIP28.6■■■□□ 2.17
NPAS3-203ENST00000357798 USP25Q9UHP3 1055 aa28.6■■■□□ 2.17
NPAS3-203ENST00000357798 TTC21BQ7Z4L5 1316 aa28.6■■■□□ 2.17
NPAS3-203ENST00000357798 METP08581 1390 aa28.59■■■□□ 2.17
NPAS3-203ENST00000357798 PNMA6EA0A0J9YXQ4 647 aa28.58■■■□□ 2.17
NPAS3-203ENST00000357798 ADCY5O95622 1261 aa28.58■■■□□ 2.17
NPAS3-203ENST00000357798 FOXD4L6Q3SYB3 417 aaPredicted RBP28.58■■■□□ 2.17
NPAS3-203ENST00000357798 FOXD4L3Q6VB84 417 aaPredicted RBP28.58■■■□□ 2.17
NPAS3-203ENST00000357798 STK31Q9BXU1 1019 aa28.58■■■□□ 2.17
NPAS3-203ENST00000357798 SPTLC3Q9NUV7 552 aa28.58■■■□□ 2.17
NPAS3-203ENST00000357798 MIS18AQ9NYP9 233 aa28.57■■■□□ 2.16
NPAS3-203ENST00000357798 CACNA1FO60840 1977 aa28.57■■■□□ 2.16
NPAS3-203ENST00000357798 UNC5CLQ8IV45 518 aa28.57■■■□□ 2.16
NPAS3-203ENST00000357798 UBE2HP62256 183 aa28.56■■■□□ 2.16
NPAS3-203ENST00000357798 TXNDC2Q86VQ3 553 aa28.56■■■□□ 2.16
NPAS3-203ENST00000357798 ZSCAN22P10073 491 aaPredicted RBP28.56■■■□□ 2.16
NPAS3-203ENST00000357798 PRR36Q9H6K5 1346 aa28.56■■■□□ 2.16
NPAS3-203ENST00000357798 RTF1Q92541 710 aaKnown RBP28.56■■■□□ 2.16
NPAS3-203ENST00000357798 FMN2Q9NZ56 1722 aa28.55■■■□□ 2.16
NPAS3-203ENST00000357798 PPP6R1Q9UPN7 881 aa28.55■■■□□ 2.16
NPAS3-203ENST00000357798 PXDNLA1KZ92 1463 aa28.54■■■□□ 2.16
NPAS3-203ENST00000357798 CNPY2Q9Y2B0 182 aa28.54■■■□□ 2.16
NPAS3-203ENST00000357798 HSP90AB2PQ58FF8 381 aa28.54■■■□□ 2.16
NPAS3-203ENST00000357798 TOPAZ1Q8N9V7 1692 aa28.54■■■□□ 2.16
NPAS3-203ENST00000357798 RAD50Q92878 1312 aa28.53■■■□□ 2.16
NPAS3-203ENST00000357798 FLIIQ13045 1269 aa28.53■■■□□ 2.16
NPAS3-203ENST00000357798 FKBP5Q13451 457 aaPredicted RBP28.53■■■□□ 2.16
NPAS3-203ENST00000357798 LRRC37A3O60309 1634 aa28.53■■■□□ 2.16
NPAS3-203ENST00000357798 USP31Q70CQ4 1352 aa28.53■■■□□ 2.16
NPAS3-203ENST00000357798 ZNF830Q96NB3 372 aaPredicted RBP28.53■■■□□ 2.16
NPAS3-203ENST00000357798 HCLS1P14317 486 aaPredicted RBP28.52■■■□□ 2.16
NPAS3-203ENST00000357798 TTC14Q96N46 770 aa28.52■■■□□ 2.16
NPAS3-203ENST00000357798 KDM4AO75164 1064 aa28.52■■■□□ 2.16
NPAS3-203ENST00000357798 IL25Q9H293 177 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms