RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 SOS1Q07889 1333 aaPredicted RBP19.61■□□□□ 0.73
PHTF1-201ENST00000357783 SDSP20132 328 aa19.6■□□□□ 0.73
PHTF1-201ENST00000357783 EXOC6BQ9Y2D4 811 aa19.6■□□□□ 0.73
PHTF1-201ENST00000357783 CEMIPQ8WUJ3 1361 aa19.6■□□□□ 0.73
PHTF1-201ENST00000357783 NCOA3Q9Y6Q9 1424 aa19.6■□□□□ 0.73
PHTF1-201ENST00000357783 CD2BP2O95400 341 aaKnown RBP19.6■□□□□ 0.73
PHTF1-201ENST00000357783 GNAI3P08754 354 aa19.6■□□□□ 0.73
PHTF1-201ENST00000357783 GCP02774 474 aa19.59■□□□□ 0.73
PHTF1-201ENST00000357783 EIF2S2P20042 333 aaKnown RBP19.58■□□□□ 0.73
PHTF1-201ENST00000357783 ZNF530Q6P9A1 599 aaPredicted RBP19.58■□□□□ 0.73
PHTF1-201ENST00000357783 PHAXQ9H814 394 aaKnown RBP19.58■□□□□ 0.73
PHTF1-201ENST00000357783 PHRF1Q9P1Y6 1649 aaKnown RBP19.58■□□□□ 0.72
PHTF1-201ENST00000357783 N4BP2Q86UW6 1770 aaPredicted RBP19.57■□□□□ 0.72
PHTF1-201ENST00000357783 PNMA6EA0A0J9YXQ4 647 aa19.57■□□□□ 0.72
PHTF1-201ENST00000357783 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
PHTF1-201ENST00000357783 LRRFIP2Q9Y608 721 aaKnown RBP19.57■□□□□ 0.72
PHTF1-201ENST00000357783 KCNQ3O43525 872 aa19.56■□□□□ 0.72
PHTF1-201ENST00000357783 MCM4P33991 863 aa19.56■□□□□ 0.72
PHTF1-201ENST00000357783 EIF4A1P60842 406 aaKnown RBP19.56■□□□□ 0.72
PHTF1-201ENST00000357783 MPRIPQ6WCQ1 1025 aa19.56■□□□□ 0.72
PHTF1-201ENST00000357783 ARHGEF25Q86VW2 580 aa19.56■□□□□ 0.72
PHTF1-201ENST00000357783 CASC1Q6TDU7 716 aa19.55■□□□□ 0.72
PHTF1-201ENST00000357783 LMO7Q8WWI1 1683 aa19.55■□□□□ 0.72
PHTF1-201ENST00000357783 KDM3BQ7LBC6 1761 aa19.55■□□□□ 0.72
PHTF1-201ENST00000357783 EIF5BO60841 1220 aaKnown RBP19.55■□□□□ 0.72
PHTF1-201ENST00000357783 DDIT3P35638 169 aa19.55■□□□□ 0.72
PHTF1-201ENST00000357783 PDE1AP54750 535 aa19.55■□□□□ 0.72
PHTF1-201ENST00000357783 TEFQ10587 303 aa19.55■□□□□ 0.72
PHTF1-201ENST00000357783 PROSER2Q86WR7 435 aaPredicted RBP19.55■□□□□ 0.72
PHTF1-201ENST00000357783 FOXD4L1Q9NU39 408 aa19.55■□□□□ 0.72
PHTF1-201ENST00000357783 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
PHTF1-201ENST00000357783 HSP90AA1P07900 732 aaKnown RBP19.54■□□□□ 0.72
PHTF1-201ENST00000357783 ATP8B2P98198 1209 aa19.54■□□□□ 0.72
PHTF1-201ENST00000357783 PLEKHO1Q53GL0 409 aaPredicted RBP19.54■□□□□ 0.72
PHTF1-201ENST00000357783 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
PHTF1-201ENST00000357783 TSHZ3Q63HK5 1081 aa19.54■□□□□ 0.72
PHTF1-201ENST00000357783 USP44Q9H0E7 712 aa19.54■□□□□ 0.72
PHTF1-201ENST00000357783 SLIT3O75094 1523 aa19.54■□□□□ 0.72
PHTF1-201ENST00000357783 K7ELQ4 463 aaPredicted RBP19.54■□□□□ 0.72
PHTF1-201ENST00000357783 PXDNQ92626 1479 aa19.53■□□□□ 0.72
PHTF1-201ENST00000357783 ANKRD24Q8TF21 1146 aa19.53■□□□□ 0.72
PHTF1-201ENST00000357783 USP26Q9BXU7 913 aa19.53■□□□□ 0.72
PHTF1-201ENST00000357783 LRRCC1Q9C099 1032 aa19.53■□□□□ 0.72
PHTF1-201ENST00000357783 UBTFL1P0CB47 393 aaPredicted RBP19.53■□□□□ 0.72
PHTF1-201ENST00000357783 CHPF2Q9P2E5 772 aa19.53■□□□□ 0.72
PHTF1-201ENST00000357783 BTBD11A6QL63 1104 aa19.53■□□□□ 0.72
PHTF1-201ENST00000357783 KRT28Q7Z3Y7 464 aa19.52■□□□□ 0.72
PHTF1-201ENST00000357783 IL27Q8NEV9 243 aa19.52■□□□□ 0.72
PHTF1-201ENST00000357783 OSBPL3Q9H4L5 887 aa19.52■□□□□ 0.72
PHTF1-201ENST00000357783 TRPM3Q9HCF6 1732 aaPredicted RBP19.52■□□□□ 0.72
PHTF1-201ENST00000357783 C1orf141Q5JVX7 400 aa19.51■□□□□ 0.71
PHTF1-201ENST00000357783 BRPF3Q9ULD4 1205 aa19.51■□□□□ 0.71
PHTF1-201ENST00000357783 IBTKQ9P2D0 1353 aaPredicted RBP19.51■□□□□ 0.71
PHTF1-201ENST00000357783 ANXA1P04083 346 aa19.51■□□□□ 0.71
PHTF1-201ENST00000357783 AMOTQ4VCS5 1084 aa19.51■□□□□ 0.71
PHTF1-201ENST00000357783 AXIN2Q9Y2T1 843 aa19.51■□□□□ 0.71
PHTF1-201ENST00000357783 SRCIN1Q9C0H9 1055 aa19.5■□□□□ 0.71
PHTF1-201ENST00000357783 RNMTO43148 476 aaKnown RBP19.5■□□□□ 0.71
PHTF1-201ENST00000357783 RABEP1Q15276 862 aa19.5■□□□□ 0.71
PHTF1-201ENST00000357783 ANO8Q9HCE9 1232 aaPredicted RBP19.5■□□□□ 0.71
PHTF1-201ENST00000357783 HOXB7P09629 217 aa19.49■□□□□ 0.71
PHTF1-201ENST00000357783 MX1P20591 662 aa19.49■□□□□ 0.71
PHTF1-201ENST00000357783 RGPD5Q99666 1765 aa19.49■□□□□ 0.71
PHTF1-201ENST00000357783 C1orf167Q5SNV9 1468 aa19.49■□□□□ 0.71
PHTF1-201ENST00000357783 SALL3Q9BXA9 1300 aa19.49■□□□□ 0.71
PHTF1-201ENST00000357783 CIZ1Q9ULV3 898 aaPredicted RBP19.48■□□□□ 0.71
PHTF1-201ENST00000357783 NCAPD2Q15021 1401 aa19.48■□□□□ 0.71
PHTF1-201ENST00000357783 PI4KAP2A4QPH2 592 aa19.48■□□□□ 0.71
PHTF1-201ENST00000357783 REC8O95072 547 aa19.48■□□□□ 0.71
PHTF1-201ENST00000357783 PI4KAP1Q8N8J0 262 aa19.48■□□□□ 0.71
PHTF1-201ENST00000357783 ERC2O15083 957 aa19.47■□□□□ 0.71
PHTF1-201ENST00000357783 TUBGCP6Q96RT7 1819 aa19.47■□□□□ 0.71
PHTF1-201ENST00000357783 TNPO1Q92973 898 aaKnown RBP19.47■□□□□ 0.71
PHTF1-201ENST00000357783 KIF1AQ12756 1690 aa19.47■□□□□ 0.71
PHTF1-201ENST00000357783 ZC3H6P61129 1189 aaKnown RBP19.46■□□□□ 0.71
PHTF1-201ENST00000357783 DNAAF4Q8WXU2 420 aa19.46■□□□□ 0.71
PHTF1-201ENST00000357783 PPP1R42Q7Z4L9 355 aa19.46■□□□□ 0.71
PHTF1-201ENST00000357783 GZF1Q9H116 711 aaPredicted RBP19.46■□□□□ 0.71
PHTF1-201ENST00000357783 SSH3Q8TE77 659 aa19.45■□□□□ 0.7
PHTF1-201ENST00000357783 C19orf44Q9H6X5 657 aa19.45■□□□□ 0.7
PHTF1-201ENST00000357783 IL1RAPL2Q9NP60 686 aa19.45■□□□□ 0.7
PHTF1-201ENST00000357783 TRAK2O60296 914 aa19.45■□□□□ 0.7
PHTF1-201ENST00000357783 NBPF7P0C2Y1 421 aaPredicted RBP19.45■□□□□ 0.7
PHTF1-201ENST00000357783 RAB3GAP1Q15042 981 aa19.45■□□□□ 0.7
PHTF1-201ENST00000357783 BEND3Q5T5X7 828 aa19.45■□□□□ 0.7
PHTF1-201ENST00000357783 DDX11L8A8MPP1 907 aa19.45■□□□□ 0.7
PHTF1-201ENST00000357783 CHMP4AQ9BY43 222 aa19.45■□□□□ 0.7
PHTF1-201ENST00000357783 CAMTA1Q9Y6Y1 1673 aa19.44■□□□□ 0.7
PHTF1-201ENST00000357783 TRIM6-TRIM34B2RNG4 842 aa19.44■□□□□ 0.7
PHTF1-201ENST00000357783 ADCY9O60503 1353 aa19.44■□□□□ 0.7
PHTF1-201ENST00000357783 SURF6O75683 361 aaKnown RBP19.44■□□□□ 0.7
PHTF1-201ENST00000357783 RILPL2Q969X0 211 aa19.44■□□□□ 0.7
PHTF1-201ENST00000357783 DDX17Q92841 729 aaKnown RBP19.43■□□□□ 0.7
PHTF1-201ENST00000357783 SRGAP3O43295 1099 aa19.43■□□□□ 0.7
PHTF1-201ENST00000357783 DBF4Q9UBU7 674 aaPredicted RBP19.43■□□□□ 0.7
PHTF1-201ENST00000357783 ERBB3P21860 1342 aa19.42■□□□□ 0.7
PHTF1-201ENST00000357783 PRAMEF22A3QJZ6 481 aa19.42■□□□□ 0.7
PHTF1-201ENST00000357783 PROSER3Q2NL68 480 aa19.42■□□□□ 0.7
PHTF1-201ENST00000357783 OVOS2A0A0G2JMS6 1433 aa19.42■□□□□ 0.7
PHTF1-201ENST00000357783 ALS2Q96Q42 1657 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms