RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 UBE2Q2Q8WVN8 375 aa8.21□□□□□ -1.1
RTN4-203ENST00000357376 CEBPAP49715 358 aaPredicted RBP8.21□□□□□ -1.1
RTN4-203ENST00000357376 TAF7Q15545 349 aaPredicted RBP8.21□□□□□ -1.1
RTN4-203ENST00000357376 PPP1R42Q7Z4L9 355 aa8.2□□□□□ -1.1
RTN4-203ENST00000357376 IQGAP1P46940 1657 aa8.2□□□□□ -1.1
RTN4-203ENST00000357376 NEXNQ0ZGT2 675 aa8.2□□□□□ -1.1
RTN4-203ENST00000357376 PRPF40BQ6NWY9 871 aaKnown RBP8.2□□□□□ -1.1
RTN4-203ENST00000357376 ZNF530Q6P9A1 599 aaPredicted RBP8.2□□□□□ -1.1
RTN4-203ENST00000357376 RIC3Q7Z5B4 369 aa8.2□□□□□ -1.1
RTN4-203ENST00000357376 ZNF592Q92610 1267 aa8.2□□□□□ -1.1
RTN4-203ENST00000357376 LRSAM1Q6UWE0 723 aa8.2□□□□□ -1.1
RTN4-203ENST00000357376 AACSQ86V21 672 aa8.2□□□□□ -1.1
RTN4-203ENST00000357376 ZNF830Q96NB3 372 aaPredicted RBP8.2□□□□□ -1.1
RTN4-203ENST00000357376 CYP46A1Q9Y6A2 500 aa8.2□□□□□ -1.1
RTN4-203ENST00000357376 RNF17Q9BXT8 1623 aaKnown RBP8.19□□□□□ -1.1
RTN4-203ENST00000357376 HTATSF1O43719 755 aaKnown RBP8.19□□□□□ -1.1
RTN4-203ENST00000357376 CEBPZQ03701 1054 aaKnown RBP8.19□□□□□ -1.1
RTN4-203ENST00000357376 RNF20Q5VTR2 975 aa8.19□□□□□ -1.1
RTN4-203ENST00000357376 CHL1O00533 1208 aa8.19□□□□□ -1.1
RTN4-203ENST00000357376 KIF1BPQ96EK5 621 aa8.19□□□□□ -1.1
RTN4-203ENST00000357376 PDRG1Q9NUG6 133 aa8.19□□□□□ -1.1
RTN4-203ENST00000357376 LMBRD1Q9NUN5 540 aa8.19□□□□□ -1.1
RTN4-203ENST00000357376 PNMA6EA0A0J9YXQ4 647 aa8.19□□□□□ -1.1
RTN4-203ENST00000357376 GORABQ5T7V8 394 aa8.19□□□□□ -1.1
RTN4-203ENST00000357376 AMOTL2Q9Y2J4 779 aa8.19□□□□□ -1.1
RTN4-203ENST00000357376 YEATS2Q9ULM3 1422 aa8.19□□□□□ -1.1
RTN4-203ENST00000357376 GOLGA6L19H0YKK7 550 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 DDX58O95786 925 aaKnown RBP8.18□□□□□ -1.1
RTN4-203ENST00000357376 HCLS1P14317 486 aaPredicted RBP8.18□□□□□ -1.1
RTN4-203ENST00000357376 TRHP20396 242 aaPredicted RBP8.18□□□□□ -1.1
RTN4-203ENST00000357376 CAMK4Q16566 473 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 LARP1BQ659C4 914 aaKnown RBP8.18□□□□□ -1.1
RTN4-203ENST00000357376 PI4KAP2A4QPH2 592 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 BECN2A8MW95 431 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 ESCO1Q5FWF5 840 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 PI4KAP1Q8N8J0 262 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 DNAJC2Q99543 621 aaKnown RBP8.18□□□□□ -1.1
RTN4-203ENST00000357376 CNPY2Q9Y2B0 182 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 MAP3K19Q56UN5 1328 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 BTBD11A6QL63 1104 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 CPA1P15085 419 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 CHMLP26374 656 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 USP48Q86UV5 1035 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 EDC4Q6P2E9 1401 aaKnown RBP8.18□□□□□ -1.1
RTN4-203ENST00000357376 ERBB4Q15303 1308 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 IQSEC2Q5JU85 1478 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 MYL6BP14649 208 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 MPRIPQ6WCQ1 1025 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 TCEANC2Q96MN5 208 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 EYA1Q99502 592 aa8.18□□□□□ -1.1
RTN4-203ENST00000357376 RTL1A6NKG5 1358 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 ATP8B2P98198 1209 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 GNL2Q13823 731 aaKnown RBP8.17□□□□□ -1.1
RTN4-203ENST00000357376 SF3A1Q15459 793 aaKnown RBP8.17□□□□□ -1.1
RTN4-203ENST00000357376 SASS6Q6UVJ0 657 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 RHPN1Q8TCX5 695 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 KIF2CQ99661 725 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 TRIM5Q9C035 493 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 CCDC8Q9H0W5 538 aaPredicted RBP8.17□□□□□ -1.1
RTN4-203ENST00000357376 PHAXQ9H814 394 aaKnown RBP8.17□□□□□ -1.1
RTN4-203ENST00000357376 TMEM63CQ9P1W3 806 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 PALD1Q9ULE6 856 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 NEUROD6Q96NK8 337 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 LIMCH1Q9UPQ0 1083 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 STX6O43752 255 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 GLRX3O76003 335 aaKnown RBP8.17□□□□□ -1.1
RTN4-203ENST00000357376 GIMAP6Q6P9H5 292 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 DNAAF4Q8WXU2 420 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 PKNOX2Q96KN3 472 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 BOLA2Q9H3K6 86 aa8.17□□□□□ -1.1
RTN4-203ENST00000357376 TULP4Q9NRJ4 1543 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 ZNF853P0CG23 659 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 CCDC183Q5T5S1 534 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 NECAB1Q8N987 351 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 QRICH2Q9H0J4 1663 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 CEP152O94986 1710 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 NRDCO43847 1150 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 RAB11FIP3O75154 756 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 LETM1O95202 739 aaPredicted RBP8.16□□□□□ -1.1
RTN4-203ENST00000357376 CCDC192P0DO97 292 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 PSMA5P28066 241 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 KRT85P78386 507 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 TTC5Q8N0Z6 440 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 NLRP2Q9NX02 1062 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 CHPF2Q9P2E5 772 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 ZKSCAN5Q9Y2L8 839 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 GLI2P10070 1586 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 ADCY5O95622 1261 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 GJB2P29033 226 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 PLEKHO1Q53GL0 409 aaPredicted RBP8.16□□□□□ -1.1
RTN4-203ENST00000357376 BLOC1S2Q6QNY1 142 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 GPT2Q8TD30 523 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 FAM135BQ49AJ0 1406 aa8.16□□□□□ -1.1
RTN4-203ENST00000357376 BRPF1P55201 1214 aaPredicted RBP8.15□□□□□ -1.1
RTN4-203ENST00000357376 ZNF445P59923 1031 aa8.15□□□□□ -1.1
RTN4-203ENST00000357376 CKAP2LQ8IYA6 745 aa8.15□□□□□ -1.1
RTN4-203ENST00000357376 DDX11Q96FC9 970 aa8.15□□□□□ -1.1
RTN4-203ENST00000357376 TTC12Q9H892 705 aaPredicted RBP8.15□□□□□ -1.1
RTN4-203ENST00000357376 OFD1O75665 1012 aa8.15□□□□□ -1.1
RTN4-203ENST00000357376 TAF7LQ5H9L4 462 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms