RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 NRKQ7Z2Y5 1582 aa17.75■□□□□ 0.43
TOP3B-201ENST00000357179 RGS12O14924 1447 aa17.75■□□□□ 0.43
TOP3B-201ENST00000357179 CTIFO43310 598 aaKnown RBP17.75■□□□□ 0.43
TOP3B-201ENST00000357179 CASC1Q6TDU7 716 aa17.75■□□□□ 0.43
TOP3B-201ENST00000357179 BRD1O95696 1058 aa17.74■□□□□ 0.43
TOP3B-201ENST00000357179 USP25Q9UHP3 1055 aa17.74■□□□□ 0.43
TOP3B-201ENST00000357179 KIAA0232Q92628 1395 aa17.74■□□□□ 0.43
TOP3B-201ENST00000357179 WASLO00401 505 aaPredicted RBP17.74■□□□□ 0.43
TOP3B-201ENST00000357179 WAPLQ7Z5K2 1190 aa17.74■□□□□ 0.43
TOP3B-201ENST00000357179 BCL11BQ9C0K0 894 aaPredicted RBP17.74■□□□□ 0.43
TOP3B-201ENST00000357179 A2ML1A8K2U0 1454 aa17.74■□□□□ 0.43
TOP3B-201ENST00000357179 FBXO31Q5XUX0 539 aaPredicted RBP17.73■□□□□ 0.43
TOP3B-201ENST00000357179 NME9Q86XW9 330 aa17.73■□□□□ 0.43
TOP3B-201ENST00000357179 COG3Q96JB2 828 aa17.73■□□□□ 0.43
TOP3B-201ENST00000357179 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
TOP3B-201ENST00000357179 RIOK3O14730 519 aaKnown RBP17.73■□□□□ 0.43
TOP3B-201ENST00000357179 ADCY5O95622 1261 aa17.73■□□□□ 0.43
TOP3B-201ENST00000357179 OGFRQ9NZT2 677 aa17.73■□□□□ 0.43
TOP3B-201ENST00000357179 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
TOP3B-201ENST00000357179 PTPRCP08575 1304 aa17.73■□□□□ 0.43
TOP3B-201ENST00000357179 IGSF3O75054 1194 aa17.73■□□□□ 0.43
TOP3B-201ENST00000357179 CEP85Q6P2H3 762 aa17.73■□□□□ 0.43
TOP3B-201ENST00000357179 IPO4Q8TEX9 1081 aaKnown RBP17.73■□□□□ 0.43
TOP3B-201ENST00000357179 CGNQ9P2M7 1197 aaKnown RBP17.73■□□□□ 0.43
TOP3B-201ENST00000357179 FOXD4L5Q5VV16 416 aaPredicted RBP17.72■□□□□ 0.43
TOP3B-201ENST00000357179 FOXD4L4Q8WXT5 416 aaPredicted RBP17.72■□□□□ 0.43
TOP3B-201ENST00000357179 GABPB1Q06547 395 aaPredicted RBP17.71■□□□□ 0.43
TOP3B-201ENST00000357179 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.43
TOP3B-201ENST00000357179 ZNF771Q7L3S4 317 aaPredicted RBP17.71■□□□□ 0.43
TOP3B-201ENST00000357179 KIAA1524Q8TCG1 905 aa17.71■□□□□ 0.43
TOP3B-201ENST00000357179 C3P01024 1663 aa17.71■□□□□ 0.43
TOP3B-201ENST00000357179 REC8O95072 547 aa17.71■□□□□ 0.43
TOP3B-201ENST00000357179 SDSP20132 328 aa17.71■□□□□ 0.43
TOP3B-201ENST00000357179 RTL1A6NKG5 1358 aa17.71■□□□□ 0.43
TOP3B-201ENST00000357179 CPS1P31327 1500 aa17.7■□□□□ 0.42
TOP3B-201ENST00000357179 FAM83GA6ND36 823 aa17.7■□□□□ 0.42
TOP3B-201ENST00000357179 CHL1O00533 1208 aa17.7■□□□□ 0.42
TOP3B-201ENST00000357179 SPATA31D1Q6ZQQ2 1576 aa17.7■□□□□ 0.42
TOP3B-201ENST00000357179 AKAP12Q02952 1782 aa17.7■□□□□ 0.42
TOP3B-201ENST00000357179 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
TOP3B-201ENST00000357179 SIRT1Q96EB6 747 aa17.7■□□□□ 0.42
TOP3B-201ENST00000357179 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
TOP3B-201ENST00000357179 OSBPL3Q9H4L5 887 aa17.69■□□□□ 0.42
TOP3B-201ENST00000357179 TMX3Q96JJ7 454 aa17.68■□□□□ 0.42
TOP3B-201ENST00000357179 AGLP35573 1532 aa17.68■□□□□ 0.42
TOP3B-201ENST00000357179 ZRANB1Q9UGI0 708 aa17.68■□□□□ 0.42
TOP3B-201ENST00000357179 CCDC61Q9Y6R9 512 aa17.68■□□□□ 0.42
TOP3B-201ENST00000357179 MSH6P52701 1360 aa17.67■□□□□ 0.42
TOP3B-201ENST00000357179 DCTN1Q14203 1278 aa17.67■□□□□ 0.42
TOP3B-201ENST00000357179 NUDT16Q96DE0 195 aaKnown RBP17.67■□□□□ 0.42
TOP3B-201ENST00000357179 NRXN3Q9Y4C0 1643 aa17.67■□□□□ 0.42
TOP3B-201ENST00000357179 GADD45BO75293 160 aaPredicted RBP17.67■□□□□ 0.42
TOP3B-201ENST00000357179 CUL4AQ13619 759 aa17.67■□□□□ 0.42
TOP3B-201ENST00000357179 SYCP1Q15431 976 aa17.67■□□□□ 0.42
TOP3B-201ENST00000357179 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
TOP3B-201ENST00000357179 ERC2O15083 957 aa17.66■□□□□ 0.42
TOP3B-201ENST00000357179 HMMRO75330 724 aa17.66■□□□□ 0.42
TOP3B-201ENST00000357179 RRS1Q15050 365 aaKnown RBP17.66■□□□□ 0.42
TOP3B-201ENST00000357179 OTUD7AQ8TE49 926 aaPredicted RBP17.66■□□□□ 0.42
TOP3B-201ENST00000357179 TECPR2O15040 1411 aa17.66■□□□□ 0.42
TOP3B-201ENST00000357179 KDM4AO75164 1064 aa17.66■□□□□ 0.42
TOP3B-201ENST00000357179 CTNNA3Q9UI47 895 aa17.66■□□□□ 0.42
TOP3B-201ENST00000357179 PDIA4P13667 645 aaKnown RBP17.65■□□□□ 0.42
TOP3B-201ENST00000357179 NCBP1Q09161 790 aaKnown RBP17.65■□□□□ 0.42
TOP3B-201ENST00000357179 KCNF1Q9H3M0 494 aa17.65■□□□□ 0.42
TOP3B-201ENST00000357179 ZBTB22O15209 634 aa17.65■□□□□ 0.42
TOP3B-201ENST00000357179 SLFN14P0C7P3 912 aa17.65■□□□□ 0.42
TOP3B-201ENST00000357179 MCM2P49736 904 aa17.65■□□□□ 0.42
TOP3B-201ENST00000357179 PYCARDQ9ULZ3 195 aa17.65■□□□□ 0.42
TOP3B-201ENST00000357179 TPM3P06753 285 aa17.65■□□□□ 0.42
TOP3B-201ENST00000357179 CCDC183Q5T5S1 534 aa17.65■□□□□ 0.42
TOP3B-201ENST00000357179 HCLS1P14317 486 aaPredicted RBP17.64■□□□□ 0.41
TOP3B-201ENST00000357179 INTS4Q96HW7 963 aaKnown RBP17.64■□□□□ 0.41
TOP3B-201ENST00000357179 USP48Q86UV5 1035 aa17.64■□□□□ 0.41
TOP3B-201ENST00000357179 VGLL3A8MV65 326 aa17.63■□□□□ 0.41
TOP3B-201ENST00000357179 EIF4A2Q14240 407 aaKnown RBP17.63■□□□□ 0.41
TOP3B-201ENST00000357179 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.63■□□□□ 0.41
TOP3B-201ENST00000357179 MEIS3Q99687 375 aa17.63■□□□□ 0.41
TOP3B-201ENST00000357179 DDX41Q9UJV9 622 aaKnown RBP17.63■□□□□ 0.41
TOP3B-201ENST00000357179 NEK4P51957 841 aa17.62■□□□□ 0.41
TOP3B-201ENST00000357179 TMEM87AQ8NBN3 555 aa17.62■□□□□ 0.41
TOP3B-201ENST00000357179 SMARCA5O60264 1052 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-201ENST00000357179 IRX5P78411 483 aaPredicted RBP17.62■□□□□ 0.41
TOP3B-201ENST00000357179 SULT6B1Q6IMI4 303 aa17.62■□□□□ 0.41
TOP3B-201ENST00000357179 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
TOP3B-201ENST00000357179 RGPD1P0DJD0 1748 aa17.62■□□□□ 0.41
TOP3B-201ENST00000357179 CRB1P82279 1406 aa17.62■□□□□ 0.41
TOP3B-201ENST00000357179 CDK11BP21127 795 aaKnown RBP17.62■□□□□ 0.41
TOP3B-201ENST00000357179 METP08581 1390 aa17.61■□□□□ 0.41
TOP3B-201ENST00000357179 TCHHQ07283 1943 aa17.61■□□□□ 0.41
TOP3B-201ENST00000357179 MX1P20591 662 aa17.61■□□□□ 0.41
TOP3B-201ENST00000357179 CCT4P50991 539 aaKnown RBP17.61■□□□□ 0.41
TOP3B-201ENST00000357179 PDE1AP54750 535 aa17.61■□□□□ 0.41
TOP3B-201ENST00000357179 KRT24Q2M2I5 525 aa17.61■□□□□ 0.41
TOP3B-201ENST00000357179 KLHL34Q8N239 644 aa17.61■□□□□ 0.41
TOP3B-201ENST00000357179 MORC2Q9Y6X9 1032 aaPredicted RBP17.61■□□□□ 0.41
TOP3B-201ENST00000357179 AEBP1Q8IUX7 1158 aa17.6■□□□□ 0.41
TOP3B-201ENST00000357179 CCDC66A2RUB6 948 aa17.6■□□□□ 0.41
TOP3B-201ENST00000357179 SLC20A2Q08357 652 aa17.6■□□□□ 0.41
TOP3B-201ENST00000357179 OVOS2A0A0J9YW53 1432 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms