RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 EN1Q05925 392 aaPredicted RBP21■□□□□ 0.95
FDPS-201ENST00000356657 IL17REQ8NFR9 667 aa21■□□□□ 0.95
FDPS-201ENST00000356657 SMARCC1Q92922 1105 aaPredicted RBP20.99■□□□□ 0.95
FDPS-201ENST00000356657 PLSCR1O15162 318 aa20.98■□□□□ 0.95
FDPS-201ENST00000356657 KCNQ2O43526 872 aa20.98■□□□□ 0.95
FDPS-201ENST00000356657 LGR6Q9HBX8 967 aa20.98■□□□□ 0.95
FDPS-201ENST00000356657 PAPPAQ13219 1627 aa20.98■□□□□ 0.95
FDPS-201ENST00000356657 PIGBQ92521 554 aa20.97■□□□□ 0.95
FDPS-201ENST00000356657 LY75O60449 1722 aa20.97■□□□□ 0.95
FDPS-201ENST00000356657 ZNF831Q5JPB2 1677 aa20.96■□□□□ 0.95
FDPS-201ENST00000356657 NFATC2IPQ8NCF5 419 aa20.96■□□□□ 0.95
FDPS-201ENST00000356657 BABAM1Q9NWV8 329 aa20.96■□□□□ 0.95
FDPS-201ENST00000356657 NEUROD2Q15784 382 aa20.95■□□□□ 0.94
FDPS-201ENST00000356657 MCM10Q7L590 875 aa20.95■□□□□ 0.94
FDPS-201ENST00000356657 TRIM35Q9UPQ4 493 aa20.95■□□□□ 0.94
FDPS-201ENST00000356657 RRP7AQ9Y3A4 280 aaKnown RBP20.95■□□□□ 0.94
FDPS-201ENST00000356657 UBR2Q8IWV8 1755 aa20.94■□□□□ 0.94
FDPS-201ENST00000356657 EZH2Q15910 746 aaKnown RBP20.94■□□□□ 0.94
FDPS-201ENST00000356657 TAF7Q15545 349 aaPredicted RBP20.93■□□□□ 0.94
FDPS-201ENST00000356657 CICQ96RK0 1608 aaPredicted RBP20.92■□□□□ 0.94
FDPS-201ENST00000356657 PALLDQ8WX93 1383 aa20.92■□□□□ 0.94
FDPS-201ENST00000356657 KDM3BQ7LBC6 1761 aa20.92■□□□□ 0.94
FDPS-201ENST00000356657 RREB1Q92766 1687 aa20.91■□□□□ 0.94
FDPS-201ENST00000356657 DCTN1Q14203 1278 aa20.91■□□□□ 0.94
FDPS-201ENST00000356657 SLC27A3Q5K4L6 730 aa20.91■□□□□ 0.94
FDPS-201ENST00000356657 IL16Q14005 1332 aa20.9■□□□□ 0.94
FDPS-201ENST00000356657 PTF1AQ7RTS3 328 aa20.9■□□□□ 0.94
FDPS-201ENST00000356657 WWC1Q8IX03 1113 aa20.9■□□□□ 0.94
FDPS-201ENST00000356657 TTC5Q8N0Z6 440 aa20.9■□□□□ 0.94
FDPS-201ENST00000356657 BTBD11A6QL63 1104 aa20.89■□□□□ 0.94
FDPS-201ENST00000356657 ATG3Q9NT62 314 aa20.89■□□□□ 0.94
FDPS-201ENST00000356657 ZNF790Q6PG37 636 aa20.88■□□□□ 0.93
FDPS-201ENST00000356657 WDR63Q8IWG1 891 aa20.88■□□□□ 0.93
FDPS-201ENST00000356657 CAMKK2Q96RR4 588 aa20.88■□□□□ 0.93
FDPS-201ENST00000356657 NUP188Q5SRE5 1749 aa20.88■□□□□ 0.93
FDPS-201ENST00000356657 CFAP44Q96MT7 982 aa20.88■□□□□ 0.93
FDPS-201ENST00000356657 IFT57Q9NWB7 429 aa20.88■□□□□ 0.93
FDPS-201ENST00000356657 ASAP1Q9ULH1 1129 aa20.88■□□□□ 0.93
FDPS-201ENST00000356657 GNAI1P63096 354 aa20.87■□□□□ 0.93
FDPS-201ENST00000356657 VSIG10Q8N0Z9 540 aa20.87■□□□□ 0.93
FDPS-201ENST00000356657 THUMPD2Q9BTF0 503 aaKnown RBP20.87■□□□□ 0.93
FDPS-201ENST00000356657 KCPQ6ZWJ8 1503 aa20.86■□□□□ 0.93
FDPS-201ENST00000356657 TAF1LQ8IZX4 1826 aa20.85■□□□□ 0.93
FDPS-201ENST00000356657 ZNF521Q96K83 1311 aa20.84■□□□□ 0.93
FDPS-201ENST00000356657 LOC102724428A0A0B4J2F2 783 aa20.84■□□□□ 0.93
FDPS-201ENST00000356657 CHL1O00533 1208 aa20.84■□□□□ 0.93
FDPS-201ENST00000356657 SIK1P57059 783 aa20.84■□□□□ 0.93
FDPS-201ENST00000356657 TXNRD1Q16881 649 aa20.84■□□□□ 0.93
FDPS-201ENST00000356657 TSPYL4Q9UJ04 414 aa20.84■□□□□ 0.93
FDPS-201ENST00000356657 C5P01031 1676 aa20.84■□□□□ 0.93
FDPS-201ENST00000356657 PSDA5PKW4 1024 aaPredicted RBP20.83■□□□□ 0.93
FDPS-201ENST00000356657 FMNL2Q96PY5 1086 aa20.83■□□□□ 0.93
FDPS-201ENST00000356657 CCNL1Q9UK58 526 aaPredicted RBP20.83■□□□□ 0.93
FDPS-201ENST00000356657 ZNF853P0CG23 659 aa20.82■□□□□ 0.92
FDPS-201ENST00000356657 COL5A3P25940 1745 aaPredicted RBP20.82■□□□□ 0.92
FDPS-201ENST00000356657 SLC39A6Q13433 755 aa20.81■□□□□ 0.92
FDPS-201ENST00000356657 NBPF14Q5TI25 921 aa20.81■□□□□ 0.92
FDPS-201ENST00000356657 TEX13AQ9BXU3 409 aaPredicted RBP20.81■□□□□ 0.92
FDPS-201ENST00000356657 HEG1Q9ULI3 1381 aa20.81■□□□□ 0.92
FDPS-201ENST00000356657 TJP1Q07157 1748 aa20.8■□□□□ 0.92
FDPS-201ENST00000356657 LAMB4A4D0S4 1761 aa20.8■□□□□ 0.92
FDPS-201ENST00000356657 PTCD1O75127 700 aaKnown RBP20.8■□□□□ 0.92
FDPS-201ENST00000356657 HNRNPUQ00839 825 aaKnown RBP eCLIP20.8■□□□□ 0.923e-6■■■□□ 17.5
FDPS-201ENST00000356657 RBM42Q9BTD8 480 aaKnown RBP20.8■□□□□ 0.92
FDPS-201ENST00000356657 MYH16Q9H6N6 1097 aa20.8■□□□□ 0.92
FDPS-201ENST00000356657 ATP6V1AP38606 617 aa20.79■□□□□ 0.92
FDPS-201ENST00000356657 R3HDM1Q15032 1099 aaKnown RBP20.79■□□□□ 0.92
FDPS-201ENST00000356657 PROM2Q8N271 834 aa20.79■□□□□ 0.92
FDPS-201ENST00000356657 ZNF496Q96IT1 587 aaPredicted RBP20.79■□□□□ 0.92
FDPS-201ENST00000356657 SALL2Q9Y467 1007 aaPredicted RBP20.79■□□□□ 0.92
FDPS-201ENST00000356657 SOS1Q07889 1333 aaPredicted RBP20.79■□□□□ 0.92
FDPS-201ENST00000356657 GOLGA2Q08379 1002 aa20.78■□□□□ 0.92
FDPS-201ENST00000356657 CHMP4AQ9BY43 222 aa20.78■□□□□ 0.92
FDPS-201ENST00000356657 ZBED9Q6R2W3 1325 aa20.78■□□□□ 0.92
FDPS-201ENST00000356657 HOXB7P09629 217 aa20.77■□□□□ 0.92
FDPS-201ENST00000356657 SNRPA1P09661 255 aaKnown RBP20.77■□□□□ 0.92
FDPS-201ENST00000356657 EIF4A1P60842 406 aaKnown RBP20.77■□□□□ 0.92
FDPS-201ENST00000356657 MBIPQ9NS73 344 aa20.77■□□□□ 0.92
FDPS-201ENST00000356657 LAS1LQ9Y4W2 734 aaKnown RBP20.77■□□□□ 0.92
FDPS-201ENST00000356657 C4BP0C0L5 1744 aa20.77■□□□□ 0.92
FDPS-201ENST00000356657 E9PSI1 815 aa20.76■□□□□ 0.91
FDPS-201ENST00000356657 QSER1Q2KHR3 1735 aa20.76■□□□□ 0.91
FDPS-201ENST00000356657 STARD3NLO95772 234 aa20.75■□□□□ 0.91
FDPS-201ENST00000356657 LRRC4BQ9NT99 713 aa20.75■□□□□ 0.91
FDPS-201ENST00000356657 MIS18AQ9NYP9 233 aa20.75■□□□□ 0.91
FDPS-201ENST00000356657 SLC4A9Q96Q91 983 aa20.75■□□□□ 0.91
FDPS-201ENST00000356657 CNTNAP4Q9C0A0 1308 aa20.74■□□□□ 0.91
FDPS-201ENST00000356657 KCNQ3O43525 872 aa20.74■□□□□ 0.91
FDPS-201ENST00000356657 RC3H1Q5TC82 1133 aaKnown RBP20.74■□□□□ 0.91
FDPS-201ENST00000356657 SENP3-EIF4A1A0A087X0R7 540 aa20.73■□□□□ 0.91
FDPS-201ENST00000356657 GIGYF1O75420 1035 aaPredicted RBP20.73■□□□□ 0.91
FDPS-201ENST00000356657 ITPK1Q13572 414 aa20.72■□□□□ 0.91
FDPS-201ENST00000356657 FANCIQ9NVI1 1328 aa20.72■□□□□ 0.91
FDPS-201ENST00000356657 ERBB4Q15303 1308 aa20.71■□□□□ 0.91
FDPS-201ENST00000356657 STK32BQ9NY57 414 aa20.71■□□□□ 0.91
FDPS-201ENST00000356657 UBR3Q6ZT12 1888 aa20.71■□□□□ 0.91
FDPS-201ENST00000356657 MYH14Q7Z406 1995 aaKnown RBP20.7■□□□□ 0.9
FDPS-201ENST00000356657 DNAJC10Q8IXB1 793 aa20.7■□□□□ 0.9
FDPS-201ENST00000356657 CYP19A1P11511 503 aaPredicted RBP20.69■□□□□ 0.9
FDPS-201ENST00000356657 SLFN5Q08AF3 891 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms