RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 FAM182BQ5T319 152 aa17.12■□□□□ 0.33
RAP1A-201ENST00000356415 TSR2Q969E8 191 aaKnown RBP17.12■□□□□ 0.33
RAP1A-201ENST00000356415 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
RAP1A-201ENST00000356415 PRIM1P49642 420 aaKnown RBP17.11■□□□□ 0.33
RAP1A-201ENST00000356415 DUSP27Q5VZP5 1158 aa17.11■□□□□ 0.33
RAP1A-201ENST00000356415 TRMT2AQ8IZ69 625 aaKnown RBP17.11■□□□□ 0.33
RAP1A-201ENST00000356415 ACSBG1Q96GR2 724 aa17.11■□□□□ 0.33
RAP1A-201ENST00000356415 MBIPQ9NS73 344 aa17.11■□□□□ 0.33
RAP1A-201ENST00000356415 THSD7AQ9UPZ6 1657 aa17.1■□□□□ 0.33
RAP1A-201ENST00000356415 LRRC37A3O60309 1634 aa17.1■□□□□ 0.33
RAP1A-201ENST00000356415 FANCIQ9NVI1 1328 aa17.1■□□□□ 0.33
RAP1A-201ENST00000356415 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
RAP1A-201ENST00000356415 TTC5Q8N0Z6 440 aa17.08■□□□□ 0.32
RAP1A-201ENST00000356415 PIGBQ92521 554 aa17.08■□□□□ 0.32
RAP1A-201ENST00000356415 EXOSC9Q06265 439 aaKnown RBP17.07■□□□□ 0.32
RAP1A-201ENST00000356415 SLC39A6Q13433 755 aa17.07■□□□□ 0.32
RAP1A-201ENST00000356415 ZNF790Q6PG37 636 aa17.07■□□□□ 0.32
RAP1A-201ENST00000356415 WNK3Q9BYP7 1800 aa17.07■□□□□ 0.32
RAP1A-201ENST00000356415 RGS12O14924 1447 aa17.06■□□□□ 0.32
RAP1A-201ENST00000356415 KCNQ3O43525 872 aa17.06■□□□□ 0.32
RAP1A-201ENST00000356415 KCNQ2O43526 872 aa17.06■□□□□ 0.32
RAP1A-201ENST00000356415 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
RAP1A-201ENST00000356415 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
RAP1A-201ENST00000356415 SHANK3Q9BYB0 1731 aa17.05■□□□□ 0.32
RAP1A-201ENST00000356415 BCL9O00512 1426 aa17.04■□□□□ 0.32
RAP1A-201ENST00000356415 EIF4A1P60842 406 aaKnown RBP17.04■□□□□ 0.32
RAP1A-201ENST00000356415 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
RAP1A-201ENST00000356415 ASAP1Q9ULH1 1129 aa17.03■□□□□ 0.32
RAP1A-201ENST00000356415 MRC1P22897 1456 aa17.03■□□□□ 0.32
RAP1A-201ENST00000356415 ATG3Q9NT62 314 aa17.02■□□□□ 0.32
RAP1A-201ENST00000356415 ADAMTS7Q9UKP4 1686 aa17.02■□□□□ 0.32
RAP1A-201ENST00000356415 PTCD1O75127 700 aaKnown RBP17.02■□□□□ 0.31
RAP1A-201ENST00000356415 CT47B1P0C2W7 299 aaPredicted RBP17.02■□□□□ 0.31
RAP1A-201ENST00000356415 KRT24Q2M2I5 525 aa17.02■□□□□ 0.31
RAP1A-201ENST00000356415 TWISTNBQ3B726 338 aaPredicted RBP17.02■□□□□ 0.31
RAP1A-201ENST00000356415 ZNF496Q96IT1 587 aaPredicted RBP17.02■□□□□ 0.31
RAP1A-201ENST00000356415 FMNL2Q96PY5 1086 aa17.02■□□□□ 0.31
RAP1A-201ENST00000356415 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.31
RAP1A-201ENST00000356415 TSPYL6Q8N831 410 aa17.01■□□□□ 0.31
RAP1A-201ENST00000356415 SMARCC1Q92922 1105 aaPredicted RBP17.01■□□□□ 0.31
RAP1A-201ENST00000356415 TRIM37O94972 964 aa17■□□□□ 0.31
RAP1A-201ENST00000356415 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
RAP1A-201ENST00000356415 VAMP4O75379 141 aa16.99■□□□□ 0.31
RAP1A-201ENST00000356415 PTF1AQ7RTS3 328 aa16.99■□□□□ 0.31
RAP1A-201ENST00000356415 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
RAP1A-201ENST00000356415 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
RAP1A-201ENST00000356415 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
RAP1A-201ENST00000356415 CHMP4AQ9BY43 222 aa16.98■□□□□ 0.31
RAP1A-201ENST00000356415 RCAN3Q9UKA8 241 aa16.98■□□□□ 0.31
RAP1A-201ENST00000356415 SOS1Q07889 1333 aaPredicted RBP16.97■□□□□ 0.31
RAP1A-201ENST00000356415 HOXB7P09629 217 aa16.97■□□□□ 0.31
RAP1A-201ENST00000356415 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
RAP1A-201ENST00000356415 ZNF428Q96B54 188 aa16.97■□□□□ 0.31
RAP1A-201ENST00000356415 PALLDQ8WX93 1383 aa16.96■□□□□ 0.31
RAP1A-201ENST00000356415 HEG1Q9ULI3 1381 aa16.96■□□□□ 0.31
RAP1A-201ENST00000356415 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
RAP1A-201ENST00000356415 TOGARAM1Q9Y4F4 1720 aa16.95■□□□□ 0.3
RAP1A-201ENST00000356415 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
RAP1A-201ENST00000356415 RARSP54136 660 aaKnown RBP16.94■□□□□ 0.3
RAP1A-201ENST00000356415 HDGFL1Q5TGJ6 251 aa16.94■□□□□ 0.3
RAP1A-201ENST00000356415 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
RAP1A-201ENST00000356415 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
RAP1A-201ENST00000356415 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
RAP1A-201ENST00000356415 LOC102724428A0A0B4J2F2 783 aa16.94■□□□□ 0.3
RAP1A-201ENST00000356415 ATP6V1AP38606 617 aa16.94■□□□□ 0.3
RAP1A-201ENST00000356415 SIK1P57059 783 aa16.94■□□□□ 0.3
RAP1A-201ENST00000356415 DOT1LQ8TEK3 1739 aa16.93■□□□□ 0.3
RAP1A-201ENST00000356415 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
RAP1A-201ENST00000356415 APBA3O96018 575 aa16.93■□□□□ 0.3
RAP1A-201ENST00000356415 ALDH1L2Q3SY69 923 aa16.93■□□□□ 0.3
RAP1A-201ENST00000356415 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
RAP1A-201ENST00000356415 SMC4Q9NTJ3 1288 aa16.93■□□□□ 0.3
RAP1A-201ENST00000356415 USP16Q9Y5T5 823 aa16.93■□□□□ 0.3
RAP1A-201ENST00000356415 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
RAP1A-201ENST00000356415 BCL2L13Q9BXK5 485 aa16.92■□□□□ 0.3
RAP1A-201ENST00000356415 BRWD3Q6RI45 1802 aa16.92■□□□□ 0.3
RAP1A-201ENST00000356415 STARD3NLO95772 234 aa16.91■□□□□ 0.3
RAP1A-201ENST00000356415 DNAJC10Q8IXB1 793 aa16.91■□□□□ 0.3
RAP1A-201ENST00000356415 SLC4A9Q96Q91 983 aa16.91■□□□□ 0.3
RAP1A-201ENST00000356415 SIPA1L3O60292 1781 aaPredicted RBP16.9■□□□□ 0.3
RAP1A-201ENST00000356415 BCAR3O75815 825 aa16.9■□□□□ 0.3
RAP1A-201ENST00000356415 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
RAP1A-201ENST00000356415 SLC4A2P04920 1241 aa16.89■□□□□ 0.3
RAP1A-201ENST00000356415 DBF4Q9UBU7 674 aaPredicted RBP16.89■□□□□ 0.3
RAP1A-201ENST00000356415 CCNL1Q9UK58 526 aaPredicted RBP16.89■□□□□ 0.3
RAP1A-201ENST00000356415 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.3
RAP1A-201ENST00000356415 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.29
RAP1A-201ENST00000356415 KDM3BQ7LBC6 1761 aa16.89■□□□□ 0.29
RAP1A-201ENST00000356415 PLSCR1O15162 318 aa16.88■□□□□ 0.29
RAP1A-201ENST00000356415 CHPF2Q9P2E5 772 aa16.88■□□□□ 0.29
RAP1A-201ENST00000356415 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
RAP1A-201ENST00000356415 KAT6BQ8WYB5 2073 aa16.88■□□□□ 0.29
RAP1A-201ENST00000356415 ITGB4P16144 1822 aa16.87■□□□□ 0.29
RAP1A-201ENST00000356415 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
RAP1A-201ENST00000356415 KCNQ4P56696 695 aa16.87■□□□□ 0.29
RAP1A-201ENST00000356415 MRPL50Q8N5N7 158 aaKnown RBP16.87■□□□□ 0.29
RAP1A-201ENST00000356415 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
RAP1A-201ENST00000356415 FRAT1Q92837 279 aaPredicted RBP16.87■□□□□ 0.29
RAP1A-201ENST00000356415 A1BGP04217 495 aa16.86■□□□□ 0.29
RAP1A-201ENST00000356415 CYP19A1P11511 503 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms